CRCGN009_HEPG2_24H:G18 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description withaferin-a 0.62 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

97 genes differentially expressed following the CRCGN009_HEPG2_24H:G18 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 6.56694
ABHD4 abhydrolase domain containing 4 5.62122
UGDH UDP-glucose 6-dehydrogenase 5.2296
MAP7 microtubule-associated protein 7 4.93842
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 4.62614
HMOX1 heme oxygenase 1 4.54847
CDPF1 cysteine-rich, DPF motif domain containing 1 4.20336
HSPA1A heat shock 70kDa protein 1A 4.08248
BACE2 beta-site APP-cleaving enzyme 2 3.72955
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) 3.65298
H2BC12 H2B clustered histone 12 3.57227
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 3.54096
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 3.46307
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 3.46143
CBR3 carbonyl reductase 3 3.44709
TMEM109 transmembrane protein 109 3.33045
FOSL1 FOS-like antigen 1 3.32285
LCN2 lipocalin 2 3.31356
RBKS ribokinase 3.25996
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 3.12202
CCNA1 cyclin A1 3.10327
SQSTM1 sequestosome 1 3.06626
RRAGA Ras-related GTP binding A 2.97679
KLHL21 kelch-like family member 21 2.82379
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 2.72968
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa 2.64753
PEX11A peroxisomal biogenesis factor 11 alpha 2.62391
TERT telomerase reverse transcriptase 2.59735
DIPK1A divergent protein kinase domain 1A 2.58387
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2.58323
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 2.56581
GCLM glutamate-cysteine ligase, modifier subunit 2.51893
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 2.51098
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 2.50558
CHMP6 charged multivesicular body protein 6 2.47896
BIRC2 baculoviral IAP repeat containing 2 2.45461
CYB561 cytochrome b561 2.41423
MAST2 microtubule associated serine/threonine kinase 2 2.41332
TEX10 testis expressed 10 2.38475
MCOLN1 mucolipin 1 2.28868
ALAS1 5'-aminolevulinate synthase 1 2.28686
KEAP1 kelch-like ECH-associated protein 1 2.27781
MYLK myosin light chain kinase 2.22617
SLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A1 2.22471
PPARG peroxisome proliferator-activated receptor gamma 2.21717
CCDC85B coiled-coil domain containing 85B 2.16751
SMNDC1 survival motor neuron domain containing 1 2.08481
CGRRF1 cell growth regulator with ring finger domain 1 2.04646
TATDN2 TatD DNase domain containing 2 2.02657

decreased expression

Symbol Name Standardized Value
LDHD lactate dehydrogenase D -7.15124
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) -5.68322
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma -4.56757
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -4.24384
HYOU1 hypoxia up-regulated 1 -4.11706
TRIB3 tribbles pseudokinase 3 -3.96774
HSPB1 heat shock 27kDa protein 1 -3.93759
ANKRD10 ankyrin repeat domain 10 -3.93004
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -3.73322
PCCB propionyl CoA carboxylase, beta polypeptide -3.6991
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -3.67402
PGM1 phosphoglucomutase 1 -3.66607
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) -3.60267
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -3.55655
MRPS2 mitochondrial ribosomal protein S2 -3.54187
INTS3 integrator complex subunit 3 -3.35024
COG2 component of oligomeric golgi complex 2 -3.20295
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -3.19878
EGF epidermal growth factor -3.17839
AKAP8 A kinase (PRKA) anchor protein 8 -2.90704
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6 -2.87583
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast) -2.78771
VAT1 vesicle amine transport 1 -2.69102
CCNB2 cyclin B2 -2.61688
GNAS GNAS complex locus -2.60439
TCEAL4 transcription elongation factor A (SII)-like 4 -2.56813
COL21A1 collagen, type XXI, alpha 1 -2.51769
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) -2.47141
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.4641
MTA1 metastasis associated 1 -2.46136
TOR1A torsin family 1, member A (torsin A) -2.43625
ZMIZ1 zinc finger, MIZ-type containing 1 -2.42022
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase -2.41105
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase -2.37343
PAFAH1B3 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) -2.32031
RPS4Y1 ribosomal protein S4, Y-linked 1 -2.30828
DHRS7 dehydrogenase/reductase (SDR family) member 7 -2.25852
C2CD5 C2 calcium-dependent domain containing 5 -2.22077
OXA1L oxidase (cytochrome c) assembly 1-like -2.18482
ADI1 acireductone dioxygenase 1 -2.18036
ZNF274 zinc finger protein 274 -2.14349
FGFR4 fibroblast growth factor receptor 4 -2.11801
GET1 guided entry of tail-anchored proteins factor 1 -2.10453
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -2.07133
ITIH5 inter-alpha-trypsin inhibitor heavy chain family, member 5 -2.03553
ZNF586 zinc finger protein 586 -2.01687
NDN necdin, melanoma antigen (MAGE) family member -2.01429
MAPK13 mitogen-activated protein kinase 13 -2.00426