CRCGN010_HEPG2_24H:B15 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description indole 10.05 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

60 genes differentially expressed following the CRCGN010_HEPG2_24H:B15 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
NOTCH1 notch 1 7.23419
PPARG peroxisome proliferator-activated receptor gamma 4.29667
RPL39L ribosomal protein L39-like 3.99935
MYLK myosin light chain kinase 3.79115
CARMIL1 capping protein regulator and myosin 1 linker 1 3.75618
AMDHD2 amidohydrolase domain containing 2 3.73971
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 3.24509
CIAO3 cytosolic iron-sulfur assembly component 3 3.21116
RPP38 ribonuclease P/MRP 38kDa subunit 3.0145
NR1H2 nuclear receptor subfamily 1, group H, member 2 2.89475
PNKP polynucleotide kinase 3'-phosphatase 2.72981
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 2.6579
SRC SRC proto-oncogene, non-receptor tyrosine kinase 2.56638
GSTZ1 glutathione S-transferase zeta 1 2.52835
CHMP6 charged multivesicular body protein 6 2.48733
DENND2D DENN/MADD domain containing 2D 2.48136
LCN2 lipocalin 2 2.43536
HLA-DMA major histocompatibility complex, class II, DM alpha 2.40496
TCFL5 transcription factor-like 5 (basic helix-loop-helix) 2.31963
MAP7 microtubule-associated protein 7 2.26509
STAP2 signal transducing adaptor family member 2 2.24321
H2BC12 H2B clustered histone 12 2.19813
CCNA1 cyclin A1 2.18382
MVP major vault protein 2.16275
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.13791
SOCS2 suppressor of cytokine signaling 2 2.13125
VAT1 vesicle amine transport 1 2.12929
RXYLT1 ribitol xylosyltransferase 1 2.01202

decreased expression

Symbol Name Standardized Value
MRPS2 mitochondrial ribosomal protein S2 -6.99866
ZNF586 zinc finger protein 586 -6.2738
ADI1 acireductone dioxygenase 1 -5.01237
TLR4 toll-like receptor 4 -4.78343
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -4.27482
CCNB1 cyclin B1 -4.01272
MAPK13 mitogen-activated protein kinase 13 -3.73002
OXA1L oxidase (cytochrome c) assembly 1-like -3.65239
LDHD lactate dehydrogenase D -3.5699
SNX11 sorting nexin 11 -3.54479
CCNB2 cyclin B2 -3.44023
PCNA proliferating cell nuclear antigen -3.30214
DSG2 desmoglein 2 -3.29475
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -3.25403
PCCB propionyl CoA carboxylase, beta polypeptide -3.22551
TARBP1 TAR (HIV-1) RNA binding protein 1 -3.12928
FAIM Fas apoptotic inhibitory molecule -3.03846
CTSD cathepsin D -2.94928
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -2.92148
RAI14 retinoic acid induced 14 -2.84125
SCAND1 SCAN domain containing 1 -2.80401
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -2.76102
NCK1 NCK adaptor protein 1 -2.65487
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma -2.6351
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa -2.59623
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -2.46075
SLC35F2 solute carrier family 35, member F2 -2.33717
NRIP1 nuclear receptor interacting protein 1 -2.31342
TLCD3A TLC domain containing 3A -2.27771
MACF1 microtubule-actin crosslinking factor 1 -2.23546
CAPNS1 calpain, small subunit 1 -2.22203
CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 -2.07353