CRCGN010_HEPG2_24H:K16 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description lithocholic-acid 4.98 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

80 genes differentially expressed following the CRCGN010_HEPG2_24H:K16 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
LCN2 lipocalin 2 10.0
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 5.91798
CHN1 chimerin 1 5.90132
MAP7 microtubule-associated protein 7 5.74542
AMDHD2 amidohydrolase domain containing 2 5.73301
RPL39L ribosomal protein L39-like 5.3104
CXCL2 chemokine (C-X-C motif) ligand 2 5.08643
JADE2 jade family PHD finger 2 5.08355
TIAM1 T-cell lymphoma invasion and metastasis 1 5.01775
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.60179
GPER1 G protein-coupled estrogen receptor 1 4.38086
MAMLD1 mastermind-like domain containing 1 4.29357
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 4.23337
INTS3 integrator complex subunit 3 4.16494
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 3.84971
SNAP25 synaptosomal-associated protein, 25kDa 3.72449
BACE2 beta-site APP-cleaving enzyme 2 3.65885
E2F2 E2F transcription factor 2 3.64586
ADGRE5 adhesion G protein-coupled receptor E5 3.38682
KIF5C kinesin family member 5C 3.03239
GADD45A growth arrest and DNA-damage-inducible, alpha 3.01615
HLA-DRA major histocompatibility complex, class II, DR alpha 2.96608
HLA-DMA major histocompatibility complex, class II, DM alpha 2.66294
IKZF1 IKAROS family zinc finger 1 (Ikaros) 2.57533
EPN2 epsin 2 2.55733
KCNK1 potassium channel, two pore domain subfamily K, member 1 2.52452
ADORA3 adenosine A3 receptor 2.43731
CLDN10 claudin 10 2.43282
TTC12 tetratricopeptide repeat domain 12 2.42
DYNLT3 dynein, light chain, Tctex-type 3 2.37866
APOO apolipoprotein O 2.25356
PDCD6 programmed cell death 6 2.25317
FRK fyn-related Src family tyrosine kinase 2.25103
SNAP91 synaptosomal-associated protein, 91kDa 2.24598
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 2.24469
BIRC2 baculoviral IAP repeat containing 2 2.24028
DIPK1A divergent protein kinase domain 1A 2.23223
MCUR1 mitochondrial calcium uniporter regulator 1 2.18995
CD82 CD82 molecule 2.10262
ATP8B4 ATPase, class I, type 8B, member 4 2.06254
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 2.04821
C2CD2 C2 calcium-dependent domain containing 2 2.02226
GPC5 glypican 5 2.01909
OCA2 oculocutaneous albinism II 2.01233
SPATA6 spermatogenesis associated 6 2.00829

decreased expression

Symbol Name Standardized Value
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -5.55647
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -4.71562
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -4.43637
PTPRK protein tyrosine phosphatase, receptor type, K -4.26692
CDC20 cell division cycle 20 -4.09673
TBX2 T-box 2 -4.08968
C2CD5 C2 calcium-dependent domain containing 5 -3.95537
CD320 CD320 molecule -3.86893
TRIB3 tribbles pseudokinase 3 -3.74877
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 -3.58961
CASP3 caspase 3, apoptosis-related cysteine peptidase -3.57527
GNAS GNAS complex locus -3.27611
RGS2 regulator of G-protein signaling 2 -3.23026
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -3.10637
GLOD4 glyoxalase domain containing 4 -2.96935
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1 -2.8769
TRAPPC6A trafficking protein particle complex 6A -2.85599
VDAC1 voltage-dependent anion channel 1 -2.78783
DHRS7 dehydrogenase/reductase (SDR family) member 7 -2.7864
NT5DC2 5'-nucleotidase domain containing 2 -2.74643
EIF5 eukaryotic translation initiation factor 5 -2.65567
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 -2.56427
SPAG4 sperm associated antigen 4 -2.53152
FAIM Fas apoptotic inhibitory molecule -2.50533
ZNF586 zinc finger protein 586 -2.26471
ZNF32 zinc finger protein 32 -2.238
POGK pogo transposable element with KRAB domain -2.21563
MAPK13 mitogen-activated protein kinase 13 -2.18541
NR1H2 nuclear receptor subfamily 1, group H, member 2 -2.16958
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon -2.14039
SCCPDH saccharopine dehydrogenase (putative) -2.0848
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) -2.03366
NLRP4 NLR family, pyrin domain containing 4 -2.03112
DENND1B DENN/MADD domain containing 1B -2.00674
PLEKHO1 pleckstrin homology domain containing, family O member 1 -2.00122