CRCGN010_HEPG2_24H:K18 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description lithocholic-acid 1.24 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

44 genes differentially expressed following the CRCGN010_HEPG2_24H:K18 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
PHKG2 phosphorylase kinase, gamma 2 (testis) 5.27457
LOC122526780 uncharacterized LOC122526780 5.16257
DYNLT3 dynein, light chain, Tctex-type 3 4.68417
CYCS cytochrome c, somatic 3.97623
PPP1R13B protein phosphatase 1, regulatory subunit 13B 3.81562
IDE insulin-degrading enzyme 3.70345
MAP7 microtubule-associated protein 7 3.55661
KDM5A lysine (K)-specific demethylase 5A 3.26825
CSK c-src tyrosine kinase 2.98624
NOTCH1 notch 1 2.91759
LPAR2 lysophosphatidic acid receptor 2 2.77319
PLS1 plastin 1 2.69991
LCN2 lipocalin 2 2.65236
CYB561 cytochrome b561 2.62053
C2CD2 C2 calcium-dependent domain containing 2 2.48642
GPER1 G protein-coupled estrogen receptor 1 2.44713
ATP11B ATPase, class VI, type 11B 2.40171
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 2.36863
E2F2 E2F transcription factor 2 2.27968
NOP53 NOP53 ribosome biogenesis factor 2.25939
NOSIP nitric oxide synthase interacting protein 2.1481
PDLIM1 PDZ and LIM domain 1 2.13448

decreased expression

Symbol Name Standardized Value
TARBP1 TAR (HIV-1) RNA binding protein 1 -7.29953
CCNB2 cyclin B2 -6.82306
ZNF586 zinc finger protein 586 -5.73903
GADD45A growth arrest and DNA-damage-inducible, alpha -5.36055
HACD3 3-hydroxyacyl-CoA dehydratase 3 -5.15003
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -5.00886
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -4.81721
PLK1 polo-like kinase 1 -4.44695
TLR4 toll-like receptor 4 -3.97571
PRPF4 pre-mRNA processing factor 4 -3.59604
RFC2 replication factor C (activator 1) 2, 40kDa -3.27226
NR2F6 nuclear receptor subfamily 2, group F, member 6 -3.26492
DERA deoxyribose-phosphate aldolase (putative) -3.26424
PCCB propionyl CoA carboxylase, beta polypeptide -2.77142
FAIM Fas apoptotic inhibitory molecule -2.57279
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -2.56383
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -2.4349
ITGB1BP1 integrin beta 1 binding protein 1 -2.37165
DUSP6 dual specificity phosphatase 6 -2.23913
OXA1L oxidase (cytochrome c) assembly 1-like -2.22461
CASP7 caspase 7, apoptosis-related cysteine peptidase -2.14488
LOC124907782 dual specificity protein phosphatase 22 -2.01853