CRCGN012_HEPG2_24H:L11 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description tryptophan 2.5 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

60 genes differentially expressed following the CRCGN012_HEPG2_24H:L11 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
TIAM1 T-cell lymphoma invasion and metastasis 1 6.063
CARMIL1 capping protein regulator and myosin 1 linker 1 5.54484
PPARG peroxisome proliferator-activated receptor gamma 5.1008
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 4.94702
KLHL21 kelch-like family member 21 4.90119
CHMP6 charged multivesicular body protein 6 4.88702
CHN1 chimerin 1 4.84635
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 4.76965
DYNLT3 dynein, light chain, Tctex-type 3 4.42248
MAMLD1 mastermind-like domain containing 1 4.35974
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 3.69998
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 3.65844
EPHA3 EPH receptor A3 3.63741
STIMATE STIM activating enhancer 3.62499
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 3.52827
E2F2 E2F transcription factor 2 3.32296
RPL39L ribosomal protein L39-like 3.072
LCN2 lipocalin 2 3.01234
CSK c-src tyrosine kinase 3.00365
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2.99908
CIAO3 cytosolic iron-sulfur assembly component 3 2.98854
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 2.78057
NMU neuromedin U 2.61766
VPS28 vacuolar protein sorting 28 homolog (S. cerevisiae) 2.60086
NOSIP nitric oxide synthase interacting protein 2.46636
CRK v-crk avian sarcoma virus CT10 oncogene homolog 2.40696
PCNA proliferating cell nuclear antigen 2.34554
PLSCR3 phospholipid scramblase 3 2.29907
WDR11 WD repeat domain 11 2.08884
GLB1L galactosidase, beta 1-like 2.085
WIPI1 WD repeat domain, phosphoinositide interacting 1 2.04621

decreased expression

Symbol Name Standardized Value
LDHD lactate dehydrogenase D -10.0
ZNF586 zinc finger protein 586 -7.88053
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -7.78481
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -5.16564
ADI1 acireductone dioxygenase 1 -4.58574
NT5DC2 5'-nucleotidase domain containing 2 -4.36396
VDAC1 voltage-dependent anion channel 1 -3.84495
COG2 component of oligomeric golgi complex 2 -3.70325
ISOC1 isochorismatase domain containing 1 -3.48327
CDC20 cell division cycle 20 -3.22147
TSEN2 TSEN2 tRNA splicing endonuclease subunit -3.10445
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) -2.79722
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -2.68963
CCNB2 cyclin B2 -2.60434
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.59634
MTA1 metastasis associated 1 -2.50572
ZNF134 zinc finger protein 134 -2.4562
GOLT1B golgi transport 1B -2.39171
FGFR4 fibroblast growth factor receptor 4 -2.38037
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 -2.35784
TOR1A torsin family 1, member A (torsin A) -2.30251
OPRK1 opioid receptor, kappa 1 -2.21645
ITGB1BP1 integrin beta 1 binding protein 1 -2.18876
SNX11 sorting nexin 11 -2.17231
ZNF551 zinc finger protein 551 -2.07736
PRPF4 pre-mRNA processing factor 4 -2.07675
CHEK1 checkpoint kinase 1 -2.06957
CETN3 centrin, EF-hand protein, 3 -2.02714
RNF11 ring finger protein 11 -2.00606