CRCGN013_HEPG2_24H:B22 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description caffeine 5.05 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

42 genes differentially expressed following the CRCGN013_HEPG2_24H:B22 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
LCN2 lipocalin 2 6.90586
MOK MOK protein kinase 5.02926
AMDHD2 amidohydrolase domain containing 2 4.89022
GPATCH8 G patch domain containing 8 4.88956
SNAP25 synaptosomal-associated protein, 25kDa 4.79723
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 4.70301
CIAO3 cytosolic iron-sulfur assembly component 3 4.42261
GARRE1 granule associated Rac and RHOG effector 1 4.20634
TBP TATA box binding protein 3.69986
HLA-DMA major histocompatibility complex, class II, DM alpha 3.55493
KIF5C kinesin family member 5C 3.38428
VGLL4 vestigial-like family member 4 3.36425
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 3.02158
LOC122526780 uncharacterized LOC122526780 2.83731
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 2.76434
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2.40568
LPAR2 lysophosphatidic acid receptor 2 2.39876
SEC13 SEC13 homolog (S. cerevisiae) 2.31744
PMM2 phosphomannomutase 2 2.29119
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 2.28035
EGF epidermal growth factor 2.1592
TMEM147 transmembrane protein 147 2.1458
COL11A1 collagen, type XI, alpha 1 2.10278
TSPYL4 TSPY-like 4 2.02557

decreased expression

Symbol Name Standardized Value
MAPK13 mitogen-activated protein kinase 13 -7.22985
LDHD lactate dehydrogenase D -6.18468
CASP7 caspase 7, apoptosis-related cysteine peptidase -5.14982
DHRS7 dehydrogenase/reductase (SDR family) member 7 -4.65491
CCNB1 cyclin B1 -4.13821
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -3.40399
STAT1 signal transducer and activator of transcription 1, 91kDa -3.39468
COG4 component of oligomeric golgi complex 4 -3.36596
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) -3.29412
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -3.23182
RAI14 retinoic acid induced 14 -2.87622
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -2.85965
TCFL5 transcription factor-like 5 (basic helix-loop-helix) -2.79144
MAOA monoamine oxidase A -2.30092
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) -2.25849
CRK v-crk avian sarcoma virus CT10 oncogene homolog -2.25302
TYROBP TYRO protein tyrosine kinase binding protein -2.14153
RRAS2 related RAS viral (r-ras) oncogene homolog 2 -2.10484