CRCGN013_HEPG2_24H:B23 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description caffeine 2.52 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

48 genes differentially expressed following the CRCGN013_HEPG2_24H:B23 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
STK10 serine/threonine kinase 10 5.49139
PNKP polynucleotide kinase 3'-phosphatase 5.42851
PPP1R13B protein phosphatase 1, regulatory subunit 13B 4.72134
MSRA methionine sulfoxide reductase A 3.70488
GATA3 GATA binding protein 3 3.47699
CHN1 chimerin 1 3.37533
TREM1 triggering receptor expressed on myeloid cells 1 3.2854
SFTPB surfactant protein B 3.24698
EVL Enah/Vasp-like 3.23006
HLA-DRA major histocompatibility complex, class II, DR alpha 3.20951
LCN2 lipocalin 2 3.15576
GSTZ1 glutathione S-transferase zeta 1 3.0822
PMM2 phosphomannomutase 2 3.06557
TBP TATA box binding protein 2.87842
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 2.73184
SSBP2 single-stranded DNA binding protein 2 2.71155
CRTAP cartilage associated protein 2.68518
ADAT1 adenosine deaminase, tRNA-specific 1 2.67031
MTNAP1 mitochondrial nucleoid associated protein 1 2.33751
UFM1 ubiquitin-fold modifier 1 2.26779
WDR19 WD repeat domain 19 2.20334
CCL4 chemokine (C-C motif) ligand 4 2.13908
TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast) 2.06215
GZMH granzyme H (cathepsin G-like 2, protein h-CCPX) 2.06168
KLRG1 killer cell lectin-like receptor subfamily G, member 1 2.05153
MAST2 microtubule associated serine/threonine kinase 2 2.03531
CEP97 centrosomal protein 97kDa 2.01352

decreased expression

Symbol Name Standardized Value
TLCD3A TLC domain containing 3A -5.48928
OXA1L oxidase (cytochrome c) assembly 1-like -5.34433
NUP93 nucleoporin 93kDa -5.03097
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -5.0
GDF15 growth differentiation factor 15 -5.0
LDHD lactate dehydrogenase D -4.87239
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -4.8351
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -4.66864
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 -4.66547
NT5DC2 5'-nucleotidase domain containing 2 -4.62889
PCNA proliferating cell nuclear antigen -3.79646
CDC20 cell division cycle 20 -3.66143
CCNB1 cyclin B1 -3.50421
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -3.13251
ZNF274 zinc finger protein 274 -2.91397
EGF epidermal growth factor -2.72838
TCTA T-cell leukemia translocation altered -2.38267
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) -2.37384
PRPF4 pre-mRNA processing factor 4 -2.26286
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.17912
BEST1 bestrophin 1 -2.16163