CRCGN013_HEPG2_24H:G01 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description choline chloride 40.2 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

50 genes differentially expressed following the CRCGN013_HEPG2_24H:G01 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
CHMP6 charged multivesicular body protein 6 4.79683
RPL39L ribosomal protein L39-like 4.47667
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.24016
ALDOC aldolase C, fructose-bisphosphate 4.21201
RPP38 ribonuclease P/MRP 38kDa subunit 4.21098
CIAO3 cytosolic iron-sulfur assembly component 3 4.1085
CEP57 centrosomal protein 57kDa 3.72543
HLA-DRA major histocompatibility complex, class II, DR alpha 3.08131
GPER1 G protein-coupled estrogen receptor 1 3.07453
TBP TATA box binding protein 3.05747
RAB4A RAB4A, member RAS oncogene family 2.89458
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2.54706
DIPK1A divergent protein kinase domain 1A 2.53169
TIAM1 T-cell lymphoma invasion and metastasis 1 2.5107
TMEM135 transmembrane protein 135 2.49212
ANKRD49 ankyrin repeat domain 49 2.46231
WDTC1 WD and tetratricopeptide repeats 1 2.32001
VPS28 vacuolar protein sorting 28 homolog (S. cerevisiae) 2.31056
SULF1 sulfatase 1 2.25239
CENPX centromere protein X 2.19561
CYCS cytochrome c, somatic 2.11975
LYZ lysozyme 2.03378
GPATCH8 G patch domain containing 8 2.01797

decreased expression

Symbol Name Standardized Value
LDHD lactate dehydrogenase D -7.91875
GNAS GNAS complex locus -7.5366
ADI1 acireductone dioxygenase 1 -7.36882
CCNB2 cyclin B2 -5.97986
OXA1L oxidase (cytochrome c) assembly 1-like -5.06972
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -4.54677
UGDH UDP-glucose 6-dehydrogenase -4.05912
MRPS2 mitochondrial ribosomal protein S2 -3.90047
FASTKD5 FAST kinase domains 5 -3.73547
CCNB1 cyclin B1 -3.58533
TLCD3A TLC domain containing 3A -3.15982
CTNND1 catenin (cadherin-associated protein), delta 1 -3.11966
TOR1A torsin family 1, member A (torsin A) -3.01238
TES testin LIM domain protein -2.68045
FAIM Fas apoptotic inhibitory molecule -2.66108
CAB39 calcium binding protein 39 -2.53117
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -2.31552
LAMA5 laminin, alpha 5 -2.28344
TCTN1 tectonic family member 1 -2.26623
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -2.16921
UBE3C ubiquitin protein ligase E3C -2.15966
LY86 lymphocyte antigen 86 -2.15218
TJP2 tight junction protein 2 -2.15166
TPCN1 two pore segment channel 1 -2.09354
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide -2.05649
HLA-DMA major histocompatibility complex, class II, DM alpha -2.03332
KRT5 keratin 5, type II -2.02855