CRCGN013_HEPG2_24H:K24 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description phenobarbital, sodium 1.25 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

50 genes differentially expressed following the CRCGN013_HEPG2_24H:K24 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 5.46904
NOTCH1 notch 1 4.99258
RPP38 ribonuclease P/MRP 38kDa subunit 4.9548
PPARG peroxisome proliferator-activated receptor gamma 4.93117
CBR3 carbonyl reductase 3 4.89062
E2F2 E2F transcription factor 2 4.76954
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 4.59761
HLA-DMA major histocompatibility complex, class II, DM alpha 4.30301
CARMIL1 capping protein regulator and myosin 1 linker 1 4.2952
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 3.76794
MEF2C myocyte enhancer factor 2C 3.75702
TIAM1 T-cell lymphoma invasion and metastasis 1 3.61389
NOSIP nitric oxide synthase interacting protein 3.60027
CHN1 chimerin 1 3.59833
PRR15L proline rich 15-like 3.27486
IGHMBP2 immunoglobulin mu binding protein 2 2.87489
JADE2 jade family PHD finger 2 2.73747
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 2.72841
GPR18 G protein-coupled receptor 18 2.62377
GPATCH8 G patch domain containing 8 2.53622
CYCS cytochrome c, somatic 2.53502
WASF3 WAS protein family, member 3 2.49775
DIPK1A divergent protein kinase domain 1A 2.38868
GARRE1 granule associated Rac and RHOG effector 1 2.37944
CTLA4 cytotoxic T-lymphocyte-associated protein 4 2.24943
GSTZ1 glutathione S-transferase zeta 1 2.18922
COL11A1 collagen, type XI, alpha 1 2.05809
TNS3 tensin 3 2.02877
BFSP2 beaded filament structural protein 2, phakinin 2.0142
SYN1 synapsin I 2.01402

decreased expression

Symbol Name Standardized Value
PCNA proliferating cell nuclear antigen -9.60669
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -5.29908
TARBP1 TAR (HIV-1) RNA binding protein 1 -5.10905
RPN1 ribophorin I -4.88824
UGDH UDP-glucose 6-dehydrogenase -4.62852
HACD3 3-hydroxyacyl-CoA dehydratase 3 -4.56179
MRPS2 mitochondrial ribosomal protein S2 -4.48485
GNAS GNAS complex locus -3.50481
NVL nuclear VCP-like -2.85489
OXA1L oxidase (cytochrome c) assembly 1-like -2.62906
TMEM230 transmembrane protein 230 -2.54964
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -2.54754
COPG1 coatomer protein complex, subunit gamma 1 -2.5057
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) -2.31165
PANK2 pantothenate kinase 2 -2.29456
DDRGK1 DDRGK domain containing 1 -2.15884
SOX12 SRY (sex determining region Y)-box 12 -2.10509
SENP6 SUMO1/sentrin specific peptidase 6 -2.04877
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor -2.02296
ZNF133 zinc finger protein 133 -2.01986