CRCGN014_HEPG2_3H:A11 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description metronidazole 41.0 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

95 genes differentially expressed following the CRCGN014_HEPG2_3H:A11 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 7.78493
PMM2 phosphomannomutase 2 5.60298
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 4.9017
CBR3 carbonyl reductase 3 4.88531
CXCL2 chemokine (C-X-C motif) ligand 2 4.42786
UBQLN2 ubiquilin 2 4.33177
MAP7 microtubule-associated protein 7 3.89131
CEP57 centrosomal protein 57kDa 3.86003
SYNGAP1 synaptic Ras GTPase activating protein 1 3.50147
GPER1 G protein-coupled estrogen receptor 1 3.03997
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 2.92698
BLCAP bladder cancer associated protein 2.77726
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast) 2.68891
KIF20A kinesin family member 20A 2.62985
MYL11 myosin light chain 11 2.53595
NT5DC2 5'-nucleotidase domain containing 2 2.52105
WDTC1 WD and tetratricopeptide repeats 1 2.51888
NIP7 NIP7, nucleolar pre-rRNA processing protein 2.42215
MKNK1 MAP kinase interacting serine/threonine kinase 1 2.40157
CASC3 cancer susceptibility candidate 3 2.38911
CHN1 chimerin 1 2.36103
NOSIP nitric oxide synthase interacting protein 2.32151
CCNA2 cyclin A2 2.3012
SNX6 sorting nexin 6 2.29917
TREM1 triggering receptor expressed on myeloid cells 1 2.29528
INTS11 integrator complex subunit 11 2.27412
RACGAP1 Rac GTPase activating protein 1 2.26226
TRAM2 translocation associated membrane protein 2 2.23921
SAA2 serum amyloid A2 2.2073
TNNC2 troponin C type 2 (fast) 2.20411
IL7 interleukin 7 2.20245
GRSF1 G-rich RNA sequence binding factor 1 2.19975
GRAMD4 GRAM domain containing 4 2.17985
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast) 2.1617
CDK19 cyclin-dependent kinase 19 2.14656
CCL2 chemokine (C-C motif) ligand 2 2.14336
IMPA2 inositol(myo)-1(or 4)-monophosphatase 2 2.13477
DBR1 debranching RNA lariats 1 2.13269
PRPS2 phosphoribosyl pyrophosphate synthetase 2 2.12638
PSG6 pregnancy specific beta-1-glycoprotein 6 2.11842
MYL1 myosin, light chain 1, alkali; skeletal, fast 2.1149
HEBP1 heme binding protein 1 2.11338
PLSCR3 phospholipid scramblase 3 2.10039
LAP3 leucine aminopeptidase 3 2.09251
ZNF263 zinc finger protein 263 2.09173
S100A12 S100 calcium binding protein A12 2.07477
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2 2.07228
GK glycerol kinase 2.06744
ADAT1 adenosine deaminase, tRNA-specific 1 2.06164
SPAG7 sperm associated antigen 7 2.05483
STOM stomatin 2.03001
CYB5R1 cytochrome b5 reductase 1 2.01663
RNPEP arginyl aminopeptidase (aminopeptidase B) 2.00592

decreased expression

Symbol Name Standardized Value
GNAS GNAS complex locus -7.33722
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) -5.45862
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -5.07608
LDHD lactate dehydrogenase D -4.9805
CCNB2 cyclin B2 -4.69929
HAT1 histone acetyltransferase 1 -4.62952
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13 -4.46796
BPHL biphenyl hydrolase-like (serine hydrolase) -4.46123
WASHC4 WASH complex subunit 4 -4.22199
OXA1L oxidase (cytochrome c) assembly 1-like -3.02727
ACAA1 acetyl-CoA acyltransferase 1 -2.91153
ACTR8 ARP8 actin-related protein 8 homolog (yeast) -2.86784
CCNH cyclin H -2.82716
EIF5 eukaryotic translation initiation factor 5 -2.52979
HLA-DMA major histocompatibility complex, class II, DM alpha -2.45575
SOX17 SRY (sex determining region Y)-box 17 -2.40042
FRZB frizzled-related protein -2.3895
RAP1B RAP1B, member of RAS oncogene family -2.36558
NISCH nischarin -2.36394
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 -2.35682
TBC1D31 TBC1 domain family, member 31 -2.33711
SLC35F2 solute carrier family 35, member F2 -2.2697
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16 -2.25181
CCDC181 coiled-coil domain containing 181 -2.25015
PNMA8A PNMA family member 8A -2.24526
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase -2.24345
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -2.22375
CLTB clathrin, light chain B -2.20468
SCCPDH saccharopine dehydrogenase (putative) -2.19132
SPAG4 sperm associated antigen 4 -2.17943
VPREB3 pre-B lymphocyte 3 -2.17755
CSK c-src tyrosine kinase -2.1521
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -2.14299
IL5 interleukin 5 -2.10265
FAM200C family with sequence similarity 200 member C -2.10084
ITGB1BP1 integrin beta 1 binding protein 1 -2.05581
PPM1H protein phosphatase, Mg2+/Mn2+ dependent, 1H -2.04968
CXCR5 chemokine (C-X-C motif) receptor 5 -2.04087
TNN tenascin N -2.03061
CHD7 chromodomain helicase DNA binding protein 7 -2.02924
TXNDC9 thioredoxin domain containing 9 -2.02869
PCYOX1L prenylcysteine oxidase 1 like -2.02474