CRCGN014_HEPG2_3H:B05 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description dl-menthol 41.0 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

124 genes differentially expressed following the CRCGN014_HEPG2_3H:B05 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 7.25822
PPP1R13B protein phosphatase 1, regulatory subunit 13B 5.01076
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.66425
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 4.63455
SQOR sulfide quinone oxidoreductase 4.4715
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3 3.66696
CEP57 centrosomal protein 57kDa 3.61785
SHB Src homology 2 domain containing adaptor protein B 3.43608
CYCS cytochrome c, somatic 3.17655
IQGAP1 IQ motif containing GTPase activating protein 1 3.05499
SNX7 sorting nexin 7 3.01236
EDN1 endothelin 1 2.96894
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 2.92778
FZD1 frizzled class receptor 1 2.79318
TCTA T-cell leukemia translocation altered 2.73515
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 2.61478
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 2.6023
DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 2.60139
LIN37 lin-37 DREAM MuvB core complex component 2.59062
ZNF589 zinc finger protein 589 2.58947
SMIM40 small integral membrane protein 40 2.53279
ZNF112 zinc finger protein 112 2.52224
GPER1 G protein-coupled estrogen receptor 1 2.49322
TRIP10 thyroid hormone receptor interactor 10 2.48225
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.47962
RRAGA Ras-related GTP binding A 2.47007
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 2.42791
TBXA2R thromboxane A2 receptor 2.4085
NUCB2 nucleobindin 2 2.40842
SCYL3 SCY1-like 3 (S. cerevisiae) 2.34207
FILIP1L filamin A interacting protein 1-like 2.33766
STX6 syntaxin 6 2.32794
DCTN3 dynactin 3 (p22) 2.29046
SNAP29 synaptosomal-associated protein, 29kDa 2.28691
ZNF512B zinc finger protein 512B 2.28164
CRIP2 cysteine-rich protein 2 2.27047
ARHGAP29 Rho GTPase activating protein 29 2.2686
NIT1 nitrilase 1 2.24926
HDAC9 histone deacetylase 9 2.24195
MMP2 matrix metallopeptidase 2 2.24126
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 2.23987
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 2.20632
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 2.20266
SLAMF8 SLAM family member 8 2.1649
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 2.16046
CCNF cyclin F 2.15897
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 2.13364
SRC SRC proto-oncogene, non-receptor tyrosine kinase 2.13032
ZFYVE21 zinc finger, FYVE domain containing 21 2.10935
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 2.10805
UEVLD UEV and lactate/malate dehyrogenase domains 2.10791
RNF115 ring finger protein 115 2.10493
LAP3 leucine aminopeptidase 3 2.10099
ZBED2 zinc finger, BED-type containing 2 2.08352
ZNF148 zinc finger protein 148 2.0742
PTPN14 protein tyrosine phosphatase, non-receptor type 14 2.06545
FAM50B family with sequence similarity 50, member B 2.05441
OCRL oculocerebrorenal syndrome of Lowe 2.03956
CACNB3 calcium channel, voltage-dependent, beta 3 subunit 2.03373
SMTN smoothelin 2.01237
PTMS parathymosin 2.00908
IFNAR1 interferon (alpha, beta and omega) receptor 1 2.00214

decreased expression

Symbol Name Standardized Value
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11 -10.0
VDAC1 voltage-dependent anion channel 1 -5.82377
KDM3A lysine (K)-specific demethylase 3A -5.65315
SLC35F2 solute carrier family 35, member F2 -5.38692
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -5.02509
ENOPH1 enolase-phosphatase 1 -5.00668
CDC20 cell division cycle 20 -4.91525
LDHD lactate dehydrogenase D -4.83866
ZNF586 zinc finger protein 586 -4.69221
HAT1 histone acetyltransferase 1 -4.39267
CD320 CD320 molecule -4.33838
DHRS7 dehydrogenase/reductase (SDR family) member 7 -4.31551
GNAS GNAS complex locus -3.69407
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -3.63842
CSK c-src tyrosine kinase -3.60487
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -3.36987
PECR peroxisomal trans-2-enoyl-CoA reductase -3.34542
TRIB3 tribbles pseudokinase 3 -3.30167
ZMIZ1 zinc finger, MIZ-type containing 1 -3.22145
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -3.14599
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') -3.09563
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) -2.98099
CIAPIN1 cytokine induced apoptosis inhibitor 1 -2.97849
OXA1L oxidase (cytochrome c) assembly 1-like -2.94884
FBXO7 F-box protein 7 -2.90504
SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D -2.80419
PRPF4 pre-mRNA processing factor 4 -2.7558
OLA1 Obg-like ATPase 1 -2.66216
DDB2 damage-specific DNA binding protein 2, 48kDa -2.55732
ETFB electron-transfer-flavoprotein, beta polypeptide -2.49688
GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 -2.45781
AKAP8 A kinase (PRKA) anchor protein 8 -2.40914
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) -2.36334
FTL ferritin, light polypeptide -2.34527
FAM171A1 family with sequence similarity 171, member A1 -2.34515
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.32524
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -2.3124
MRPL23 mitochondrial ribosomal protein L23 -2.30101
GLOD4 glyoxalase domain containing 4 -2.28189
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -2.27175
JMJD1C jumonji domain containing 1C -2.26051
PPY pancreatic polypeptide -2.22842
PGAP2 post-GPI attachment to proteins 2 -2.21318
NLRP1 NLR family, pyrin domain containing 1 -2.18296
LOC124900388 uncharacterized LOC124900388 -2.1671
BLM Bloom syndrome, RecQ helicase-like -2.15973
NUTF2 nuclear transport factor 2 -2.13437
ARID4A AT rich interactive domain 4A (RBP1-like) -2.10358
NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 -2.09957
SBNO1 strawberry notch homolog 1 (Drosophila) -2.09731
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -2.09012
RNASE7 ribonuclease, RNase A family, 7 -2.06832
METTL9 methyltransferase like 9 -2.05901
PLP1 proteolipid protein 1 -2.04619
FKBP3 FK506 binding protein 3, 25kDa -2.04474
EML3 echinoderm microtubule associated protein like 3 -2.04336
TFF1 trefoil factor 1 -2.04168
ARF5 ADP-ribosylation factor 5 -2.03299
HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 -2.03023
MED28 mediator complex subunit 28 -2.02681
SLIRP SRA stem-loop interacting RNA binding protein -2.0241
BIN3 bridging integrator 3 -2.01746