CRCGN014_HEPG2_3H:E04 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description dichloroacetic-acid 41.0 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

112 genes differentially expressed following the CRCGN014_HEPG2_3H:E04 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
CIAO3 cytosolic iron-sulfur assembly component 3 5.97551
DIPK1A divergent protein kinase domain 1A 5.57807
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 5.31821
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 5.20333
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.88489
GSTZ1 glutathione S-transferase zeta 1 4.65307
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 4.02202
SNAP25 synaptosomal-associated protein, 25kDa 3.91768
CORO1A coronin, actin binding protein, 1A 3.66593
CCDC85B coiled-coil domain containing 85B 3.629
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 3.62127
PTK2 protein tyrosine kinase 2 3.48236
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3 3.33443
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 3.27929
ADGRE5 adhesion G protein-coupled receptor E5 3.18309
KIFBP kinesin family binding protein 3.08029
SHB Src homology 2 domain containing adaptor protein B 3.01146
CYB561 cytochrome b561 2.98346
PACSIN3 protein kinase C and casein kinase substrate in neurons 3 2.7973
RAB21 RAB21, member RAS oncogene family 2.77801
PLCL1 phospholipase C-like 1 2.76078
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 2.70983
MEST mesoderm specific transcript 2.70014
NVL nuclear VCP-like 2.65503
ZNF12 zinc finger protein 12 2.65169
ITFG1 integrin alpha FG-GAP repeat containing 1 2.60007
ILK integrin-linked kinase 2.54748
GHR growth hormone receptor 2.5302
ROGDI rogdi homolog (Drosophila) 2.42773
CAPN1 calpain 1, (mu/I) large subunit 2.42112
GPER1 G protein-coupled estrogen receptor 1 2.38832
ARMCX1 armadillo repeat containing, X-linked 1 2.31421
MFAP5 microfibrillar associated protein 5 2.26656
NOP53 NOP53 ribosome biogenesis factor 2.24454
RPS5 ribosomal protein S5 2.24036
TMEM204 transmembrane protein 204 2.20969
NT5E 5'-nucleotidase, ecto (CD73) 2.18774
PTK2B protein tyrosine kinase 2 beta 2.17803
COPS4 COP9 signalosome subunit 4 2.16941
ARL4C ADP-ribosylation factor-like 4C 2.1684
AHCY adenosylhomocysteinase 2.1616
UBE2L6 ubiquitin-conjugating enzyme E2L 6 2.14864
ARMCX5-GPRASP2 ARMCX5-GPRASP2 readthrough 2.13778
INTS5 integrator complex subunit 5 2.1181
NR1H2 nuclear receptor subfamily 1, group H, member 2 2.11723
TRAPPC6A trafficking protein particle complex 6A 2.11564
PTPRK protein tyrosine phosphatase, receptor type, K 2.11469
ZNF362 zinc finger protein 362 2.10524
ICE1 interactor of little elongation complex ELL subunit 1 2.10242
PPP1R16B protein phosphatase 1, regulatory subunit 16B 2.09866
LPAR6 lysophosphatidic acid receptor 6 2.08664
IPO13 importin 13 2.07878
CLN3 ceroid-lipofuscinosis, neuronal 3 2.07153
PLEKHO1 pleckstrin homology domain containing, family O member 1 2.06865
TRIM8 tripartite motif containing 8 2.06732
IFNAR1 interferon (alpha, beta and omega) receptor 1 2.03457
PGAP6 post-GPI attachment to proteins 6 2.03401
FMNL3 formin-like 3 2.03066
BSN bassoon presynaptic cytomatrix protein 2.02789
ECHDC3 enoyl CoA hydratase domain containing 3 2.0063

decreased expression

Symbol Name Standardized Value
CASP7 caspase 7, apoptosis-related cysteine peptidase -5.92073
GOLT1B golgi transport 1B -5.4943
PCNA proliferating cell nuclear antigen -5.30458
RPS4Y1 ribosomal protein S4, Y-linked 1 -4.87997
ZMIZ1 zinc finger, MIZ-type containing 1 -4.66462
ANKRD10 ankyrin repeat domain 10 -4.3065
SLC35F2 solute carrier family 35, member F2 -4.24043
TOMM34 translocase of outer mitochondrial membrane 34 -4.21798
FGFR4 fibroblast growth factor receptor 4 -3.79136
TBC1D31 TBC1 domain family, member 31 -3.73762
TLR4 toll-like receptor 4 -3.72777
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -3.6825
CCNB2 cyclin B2 -3.6303
ETFB electron-transfer-flavoprotein, beta polypeptide -3.6141
CSK c-src tyrosine kinase -3.41031
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1 -3.28932
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -3.17412
GLOD4 glyoxalase domain containing 4 -3.12999
LAGE3 L antigen family, member 3 -2.80032
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase -2.5749
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 -2.51767
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -2.51378
EMID1 EMI domain containing 1 -2.35872
TCTN1 tectonic family member 1 -2.30415
PAFAH1B3 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) -2.28378
ACYP1 acylphosphatase 1, erythrocyte (common) type -2.25698
TLCD3A TLC domain containing 3A -2.25192
BDH1 3-hydroxybutyrate dehydrogenase, type 1 -2.20677
RUVBL1 RuvB-like AAA ATPase 1 -2.17932
LGMN legumain -2.17929
CDC123 cell division cycle 123 -2.17089
FABP5 fatty acid binding protein 5 (psoriasis-associated) -2.1691
KRT10 keratin 10, type I -2.16335
SPAG4 sperm associated antigen 4 -2.15463
CAMKMT calmodulin-lysine N-methyltransferase -2.15193
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 -2.13878
FAM216A family with sequence similarity 216, member A -2.13781
RECQL RecQ helicase-like -2.13086
VRK2 vaccinia related kinase 2 -2.12203
NEK4 NIMA-related kinase 4 -2.12002
STAMBP STAM binding protein -2.11628
CYBA cytochrome b-245, alpha polypeptide -2.09063
NFIL3 nuclear factor, interleukin 3 regulated -2.08175
STN1 STN1 subunit of CST complex -2.07202
VAT1 vesicle amine transport 1 -2.07094
HEATR3 HEAT repeat containing 3 -2.05456
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 -2.03071
WDR4 WD repeat domain 4 -2.02614
COL9A3 collagen, type IX, alpha 3 -2.02364
CD320 CD320 molecule -2.01262
MRPS16 mitochondrial ribosomal protein S16 -2.00454
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -2.00311