CRCGN014_HEPG2_3H:F21 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description rotenone 40.4 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

147 genes differentially expressed following the CRCGN014_HEPG2_3H:F21 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
EGR1 early growth response 1 6.62453
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 6.43465
ZFP36 ZFP36 ring finger protein 6.10148
HSPA1A heat shock 70kDa protein 1A 5.94772
STIMATE STIM activating enhancer 5.91824
PRR15L proline rich 15-like 5.34598
JUN jun proto-oncogene 5.20335
IER3 immediate early response 3 4.8042
GSTZ1 glutathione S-transferase zeta 1 4.57979
MAP7 microtubule-associated protein 7 4.55368
PPP1R13B protein phosphatase 1, regulatory subunit 13B 4.52855
TIMP2 TIMP metallopeptidase inhibitor 2 4.45497
DDIT4 DNA-damage-inducible transcript 4 4.34642
TEX10 testis expressed 10 4.32476
JADE2 jade family PHD finger 2 4.16303
EDN1 endothelin 1 4.10197
FOSL1 FOS-like antigen 1 4.064
STAP2 signal transducing adaptor family member 2 3.97431
E2F2 E2F transcription factor 2 3.88314
NOTCH1 notch 1 3.79072
STK10 serine/threonine kinase 10 3.77566
ANO1 anoctamin 1, calcium activated chloride channel 3.71478
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 3.68643
CIAO3 cytosolic iron-sulfur assembly component 3 3.52606
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 3.49639
TRIB1 tribbles pseudokinase 1 3.47583
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 3.29109
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 3.27482
AMDHD2 amidohydrolase domain containing 2 3.248
MEST mesoderm specific transcript 3.17273
IER2 immediate early response 2 3.15079
CSK c-src tyrosine kinase 3.07705
TCFL5 transcription factor-like 5 (basic helix-loop-helix) 2.98452
ATF3 activating transcription factor 3 2.96934
LCN2 lipocalin 2 2.9068
MYC v-myc avian myelocytomatosis viral oncogene homolog 2.87727
BZW2 basic leucine zipper and W2 domains 2 2.83774
PPARG peroxisome proliferator-activated receptor gamma 2.82232
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 2.79605
ZNF589 zinc finger protein 589 2.73235
HYOU1 hypoxia up-regulated 1 2.65766
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 2.64427
IKZF1 IKAROS family zinc finger 1 (Ikaros) 2.61355
CYCS cytochrome c, somatic 2.59538
CLDN4 claudin 4 2.54345
KCNK1 potassium channel, two pore domain subfamily K, member 1 2.53448
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 2.52692
GADD45B growth arrest and DNA-damage-inducible, beta 2.5238
KDM5A lysine (K)-specific demethylase 5A 2.51646
UFM1 ubiquitin-fold modifier 1 2.4895
DTX2 deltex 2, E3 ubiquitin ligase 2.4794
HSPA6 heat shock 70kDa protein 6 (HSP70B') 2.45376
CLK3 CDC-like kinase 3 2.44991
VGLL4 vestigial-like family member 4 2.44725
GSK3B glycogen synthase kinase 3 beta 2.43655
FHL2 four and a half LIM domains 2 2.41907
HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2.40398
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2.38946
FOSB FBJ murine osteosarcoma viral oncogene homolog B 2.35443
SOX4 SRY (sex determining region Y)-box 4 2.34911
LOC127933115 uncharacterized LOC127933115 2.27072
EGR3 early growth response 3 2.23646
CNPY3 canopy FGF signaling regulator 3 2.21295
KIFBP kinesin family binding protein 2.19504
PHLDA2 pleckstrin homology-like domain, family A, member 2 2.18602
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 2.13915
PRH1 proline-rich protein HaeIII subfamily 1 2.13777
EDC3 enhancer of mRNA decapping 3 2.13171
KRT9 keratin 9, type I 2.11857
BARX1 BARX homeobox 1 2.1016
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16 2.09217
ATXN3 ataxin 3 2.0625
DUSP2 dual specificity phosphatase 2 2.04889
SPAG1 sperm associated antigen 1 2.04363
MICA MHC class I polypeptide-related sequence A 2.041
BBX bobby sox homolog (Drosophila) 2.02291
BAMBI BMP and activin membrane-bound inhibitor 2.01387
C8G complement component 8, gamma polypeptide 2.01301

decreased expression

Symbol Name Standardized Value
PCNA proliferating cell nuclear antigen -10.0
FASTKD5 FAST kinase domains 5 -8.57233
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -6.92355
LDHD lactate dehydrogenase D -6.70177
ZNF586 zinc finger protein 586 -5.91462
GNAS GNAS complex locus -5.23234
GET1 guided entry of tail-anchored proteins factor 1 -4.55788
ZDHHC6 zinc finger, DHHC-type containing 6 -4.41136
NT5DC2 5'-nucleotidase domain containing 2 -4.29835
OXA1L oxidase (cytochrome c) assembly 1-like -4.12233
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -4.073
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -4.03781
CD320 CD320 molecule -4.01753
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1 -3.853
TUBB6 tubulin, beta 6 class V -3.77999
ARID5B AT rich interactive domain 5B (MRF1-like) -3.71074
CCNB1 cyclin B1 -3.3985
CHMP4B charged multivesicular body protein 4B -3.28784
CCNB2 cyclin B2 -3.07795
ISOC1 isochorismatase domain containing 1 -3.03809
NOP56 NOP56 ribonucleoprotein -3.03649
BLCAP bladder cancer associated protein -3.02596
CDC25B cell division cycle 25B -2.937
C2CD5 C2 calcium-dependent domain containing 5 -2.83068
ANKRD10 ankyrin repeat domain 10 -2.72024
TXLNA taxilin alpha -2.68711
IDH3B isocitrate dehydrogenase 3 (NAD+) beta -2.67311
TMEM230 transmembrane protein 230 -2.61892
ACTMAP actin maturation protease -2.59484
NISCH nischarin -2.5852
GYS1 glycogen synthase 1 (muscle) -2.55534
TLCD3A TLC domain containing 3A -2.55385
CENPB centromere protein B, 80kDa -2.52114
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 -2.46365
MAT2A methionine adenosyltransferase II, alpha -2.45642
ITGA7 integrin, alpha 7 -2.42361
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma -2.4219
PCCB propionyl CoA carboxylase, beta polypeptide -2.41637
CDK1 cyclin-dependent kinase 1 -2.41184
DDRGK1 DDRGK domain containing 1 -2.40762
SNRPB2 small nuclear ribonucleoprotein polypeptide B -2.37153
MEGF8 multiple EGF-like-domains 8 -2.34501
SOX12 SRY (sex determining region Y)-box 12 -2.33928
MAVS mitochondrial antiviral signaling protein -2.31516
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 -2.31103
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) -2.3079
CGRRF1 cell growth regulator with ring finger domain 1 -2.24244
TUBA1C tubulin, alpha 1c -2.21339
NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) -2.20908
POGLUT1 protein O-glucosyltransferase 1 -2.19841
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 -2.19295
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) -2.1887
TRMT61B tRNA methyltransferase 61B -2.18027
MEMO1 mediator of cell motility 1 -2.13712
DHTKD1 dehydrogenase E1 and transketolase domain containing 1 -2.13365
TCTN1 tectonic family member 1 -2.1323
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 -2.12724
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 -2.12017
PFAS phosphoribosylformylglycinamidine synthase -2.10888
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -2.09368
HRC histidine rich calcium binding protein -2.07289
SAMM50 SAMM50 sorting and assembly machinery component -2.07056
UBE3C ubiquitin protein ligase E3C -2.07034
KIF3B kinesin family member 3B -2.06333
DPP8 dipeptidyl-peptidase 8 -2.05551
TUBA1B tubulin, alpha 1b -2.03166
YME1L1 YME1-like 1 ATPase -2.02242
PSRC1 proline/serine-rich coiled-coil 1 -2.0098
PSMG1 proteasome (prosome, macropain) assembly chaperone 1 -2.00357