CRCGN014_HEPG2_3H:G22 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description edaravone 40.2 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

60 genes differentially expressed following the CRCGN014_HEPG2_3H:G22 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
MAP7 microtubule-associated protein 7 8.04053
CYCS cytochrome c, somatic 7.40337
E2F2 E2F transcription factor 2 5.11697
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 4.72172
SKIC8 SKI8 subunit of superkiller complex 4.68944
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.4328
BZW2 basic leucine zipper and W2 domains 2 3.04083
RPL39L ribosomal protein L39-like 2.94106
PFKL phosphofructokinase, liver 2.90127
GSK3B glycogen synthase kinase 3 beta 2.85842
PPARG peroxisome proliferator-activated receptor gamma 2.77617
CCNA1 cyclin A1 2.75978
MEST mesoderm specific transcript 2.73259
GSTZ1 glutathione S-transferase zeta 1 2.52309
RAP1GAP RAP1 GTPase activating protein 2.47493
SLC25A46 solute carrier family 25, member 46 2.38089
KIF20A kinesin family member 20A 2.37505
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 2.35752
DIPK1A divergent protein kinase domain 1A 2.35447
RRAGA Ras-related GTP binding A 2.29
SF3B4 splicing factor 3b, subunit 4, 49kDa 2.25789
CAMTA1 calmodulin binding transcription activator 1 2.21313
CCDC86 coiled-coil domain containing 86 2.21019
TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae) 2.20565
DHRS4 dehydrogenase/reductase (SDR family) member 4 2.2005
FOCAD focadhesin 2.10766
MCM5 minichromosome maintenance complex component 5 2.09396
DNM2 dynamin 2 2.08732
KDM5A lysine (K)-specific demethylase 5A 2.06764
CA9 carbonic anhydrase IX 2.06636
BCAS3 breast carcinoma amplified sequence 3 2.02659
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant 2.02558

decreased expression

Symbol Name Standardized Value
LDHD lactate dehydrogenase D -10.0
ZNF586 zinc finger protein 586 -7.31157
C2CD5 C2 calcium-dependent domain containing 5 -4.0725
SLC35F2 solute carrier family 35, member F2 -3.87222
THAP11 THAP domain containing 11 -3.80624
CCNH cyclin H -3.75305
DNM1L dynamin 1-like -3.70885
RHEB Ras homolog enriched in brain -3.62021
TXNDC9 thioredoxin domain containing 9 -3.57352
GNAS GNAS complex locus -3.25788
TOMM34 translocase of outer mitochondrial membrane 34 -3.15525
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -3.08795
DERA deoxyribose-phosphate aldolase (putative) -2.99343
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -2.85116
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -2.76318
MAPK13 mitogen-activated protein kinase 13 -2.73656
WASHC4 WASH complex subunit 4 -2.66118
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 -2.6007
MRPL49 mitochondrial ribosomal protein L49 -2.52697
PUS7 pseudouridylate synthase 7 (putative) -2.34301
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -2.27141
SCUBE2 signal peptide, CUB domain, EGF-like 2 -2.25959
TMEM33 transmembrane protein 33 -2.19881
CAB39 calcium binding protein 39 -2.14384
STAU1 staufen double-stranded RNA binding protein 1 -2.12499
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -2.02607
FGD1 FYVE, RhoGEF and PH domain containing 1 -2.02322
TSPAN4 tetraspanin 4 -2.02093