CRCGN014_HEPG2_3H:H17 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description benzoic acid, sodium 40.2 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

53 genes differentially expressed following the CRCGN014_HEPG2_3H:H17 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
CBR3 carbonyl reductase 3 7.08386
AMDHD2 amidohydrolase domain containing 2 6.48782
GPER1 G protein-coupled estrogen receptor 1 4.92437
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 4.83152
GSTZ1 glutathione S-transferase zeta 1 3.93788
PNKP polynucleotide kinase 3'-phosphatase 3.89597
GAA glucosidase, alpha; acid 3.43339
VGLL4 vestigial-like family member 4 3.13851
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8 2.82455
COPS7A COP9 signalosome subunit 7A 2.7694
EPHA3 EPH receptor A3 2.6951
E2F2 E2F transcription factor 2 2.62891
PPARG peroxisome proliferator-activated receptor gamma 2.62634
SAA2 serum amyloid A2 2.53801
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 2.35379
MAGEC2 melanoma antigen family C2 2.32271
EYA1 EYA transcriptional coactivator and phosphatase 1 2.29834
AXIN1 axin 1 2.29161
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.21336
DIPK1A divergent protein kinase domain 1A 2.15417
SIX2 SIX homeobox 2 2.13531
RGS9BP regulator of G protein signaling 9 binding protein 2.12438
TPK1 thiamin pyrophosphokinase 1 2.03907
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit 2.01812

decreased expression

Symbol Name Standardized Value
PCNA proliferating cell nuclear antigen -10.0
UGDH UDP-glucose 6-dehydrogenase -7.00816
TARBP1 TAR (HIV-1) RNA binding protein 1 -6.57804
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -5.67653
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -3.99862
KDM3A lysine (K)-specific demethylase 3A -3.9541
LDHD lactate dehydrogenase D -3.93471
OXA1L oxidase (cytochrome c) assembly 1-like -3.88188
NUP85 nucleoporin 85kDa -3.80871
TUBB6 tubulin, beta 6 class V -3.79557
CCNB2 cyclin B2 -3.65194
CDR2L cerebellar degeneration-related protein 2-like -3.4756
CHMP4B charged multivesicular body protein 4B -3.43215
ZNF586 zinc finger protein 586 -3.35097
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) -3.19808
YME1L1 YME1-like 1 ATPase -3.01408
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) -2.76012
WASHC4 WASH complex subunit 4 -2.53861
DNM1L dynamin 1-like -2.37962
ZMIZ1 zinc finger, MIZ-type containing 1 -2.30594
LLGL2 lethal giant larvae homolog 2 (Drosophila) -2.27178
HMG20B high mobility group 20B -2.22525
MRPS7 mitochondrial ribosomal protein S7 -2.18011
PCCB propionyl CoA carboxylase, beta polypeptide -2.17122
GNAS GNAS complex locus -2.15304
SIN3B SIN3 transcription regulator family member B -2.1403
KCTD2 potassium channel tetramerization domain containing 2 -2.13857
MAPK13 mitogen-activated protein kinase 13 -2.09473
F3 coagulation factor III (thromboplastin, tissue factor) -2.01143