CRCGN014_HEPG2_3H:P01 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description geldanamycin 20.0 um perturbation at 3 h in HEPG2 (Carcinogenome)
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Genes

114 genes differentially expressed following the CRCGN014_HEPG2_3H:P01 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
DDIT4 DNA-damage-inducible transcript 4 10.0
HSPA1A heat shock 70kDa protein 1A 10.0
CXCL2 chemokine (C-X-C motif) ligand 2 6.63051
ADRB2 adrenoceptor beta 2, surface 6.367
BAG3 BCL2-associated athanogene 3 6.01596
DNAJB2 DnaJ (Hsp40) homolog, subfamily B, member 2 5.71557
CBR3 carbonyl reductase 3 5.12665
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 4.90278
CYCS cytochrome c, somatic 4.38262
SYNGAP1 synaptic Ras GTPase activating protein 1 4.35553
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 4.28442
MYC v-myc avian myelocytomatosis viral oncogene homolog 4.13121
AARS1 alanyl-tRNA synthetase 1 4.10042
HYOU1 hypoxia up-regulated 1 4.01812
SFTPB surfactant protein B 4.01373
HSPA1B heat shock 70kDa protein 1B 3.88925
RPL39L ribosomal protein L39-like 3.5989
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 3.52863
GFOD1 glucose-fructose oxidoreductase domain containing 1 3.50301
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 3.33853
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 3.24301
HSPB1 heat shock 27kDa protein 1 2.9869
NUCB2 nucleobindin 2 2.8984
EVL Enah/Vasp-like 2.78148
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 2.70248
YARS1 tyrosyl-tRNA synthetase 1 2.69333
HSPA6 heat shock 70kDa protein 6 (HSP70B') 2.66068
ABHD4 abhydrolase domain containing 4 2.59092
LCN2 lipocalin 2 2.58053
EPN2 epsin 2 2.57366
PPP1R3C protein phosphatase 1, regulatory subunit 3C 2.57239
PRKCH protein kinase C, eta 2.52959
SSBP2 single-stranded DNA binding protein 2 2.4822
NUPR1 nuclear protein, transcriptional regulator, 1 2.45459
PLS1 plastin 1 2.44525
GSTZ1 glutathione S-transferase zeta 1 2.43968
NEK7 NIMA-related kinase 7 2.39096
GFPT1 glutamine--fructose-6-phosphate transaminase 1 2.37833
PCDHB11 protocadherin beta 11 2.32775
P2RY2 purinergic receptor P2Y, G-protein coupled, 2 2.30914
CDK7 cyclin-dependent kinase 7 2.29668
ASNS asparagine synthetase (glutamine-hydrolyzing) 2.28506
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 2.26678
UFM1 ubiquitin-fold modifier 1 2.24329
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 2.21452
MEST mesoderm specific transcript 2.19305
CASC3 cancer susceptibility candidate 3 2.19071
TNIP1 TNFAIP3 interacting protein 1 2.18674
TES testin LIM domain protein 2.16532
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) 2.13402
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa 2.12398
EGR1 early growth response 1 2.10794
ICAM1 intercellular adhesion molecule 1 2.09601
ITPKC inositol-trisphosphate 3-kinase C 2.08694
BHMT2 betaine--homocysteine S-methyltransferase 2 2.06514
RUBCN rubicon autophagy regulator 2.04024
CREB1 cAMP responsive element binding protein 1 2.03377
LOC128125814 uncharacterized LOC128125814 2.02573
TBC1D10C TBC1 domain family, member 10C 2.02493
XPOT exportin, tRNA 2.00995

decreased expression

Symbol Name Standardized Value
PCNA proliferating cell nuclear antigen -7.12623
FASTKD5 FAST kinase domains 5 -6.7803
BPHL biphenyl hydrolase-like (serine hydrolase) -6.03419
CAB39 calcium binding protein 39 -4.97099
CDC20 cell division cycle 20 -4.81624
LAP3 leucine aminopeptidase 3 -4.01222
ETFB electron-transfer-flavoprotein, beta polypeptide -3.99898
HAT1 histone acetyltransferase 1 -3.886
ADI1 acireductone dioxygenase 1 -3.8399
PROS1 protein S (alpha) -3.72921
ZNF586 zinc finger protein 586 -3.61926
CCDC86 coiled-coil domain containing 86 -3.46408
LDHD lactate dehydrogenase D -3.44028
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11 -3.33315
CCNH cyclin H -3.24372
SCAND1 SCAN domain containing 1 -3.11031
TERT telomerase reverse transcriptase -3.08432
SOAT2 sterol O-acyltransferase 2 -3.07285
ITFG1 integrin alpha FG-GAP repeat containing 1 -2.99623
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -2.98357
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -2.81215
CDC25B cell division cycle 25B -2.75007
GINS1 GINS complex subunit 1 (Psf1 homolog) -2.72526
PSRC1 proline/serine-rich coiled-coil 1 -2.68806
ELAC2 elaC ribonuclease Z 2 -2.67647
COG7 component of oligomeric golgi complex 7 -2.66806
GNAS GNAS complex locus -2.55772
ACOT9 acyl-CoA thioesterase 9 -2.52719
AGBL5 ATP/GTP binding protein-like 5 -2.48315
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1 -2.48207
PLK1 polo-like kinase 1 -2.447
FOS FBJ murine osteosarcoma viral oncogene homolog -2.39256
TRAP1 TNF receptor-associated protein 1 -2.33903
TBC1D31 TBC1 domain family, member 31 -2.33534
CDK4 cyclin-dependent kinase 4 -2.33092
DDB2 damage-specific DNA binding protein 2, 48kDa -2.33025
NOP56 NOP56 ribonucleoprotein -2.32543
CASP3 caspase 3, apoptosis-related cysteine peptidase -2.27366
OXA1L oxidase (cytochrome c) assembly 1-like -2.24142
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) -2.20307
CHEK1 checkpoint kinase 1 -2.20031
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -2.15616
LOC124907782 dual specificity protein phosphatase 22 -2.1434
EMC8 ER membrane protein complex subunit 8 -2.13109
THAP11 THAP domain containing 11 -2.11517
TMEM230 transmembrane protein 230 -2.1128
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1 -2.11116
DCK deoxycytidine kinase -2.10821
ZDHHC14 zinc finger, DHHC-type containing 14 -2.07599
ATAD5 ATPase family, AAA domain containing 5 -2.06174
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 -2.04409
FAIM Fas apoptotic inhibitory molecule -2.03114
EFHD2 EF-hand domain family, member D2 -2.02939
MSH6 mutS homolog 6 -2.0016