CRCGN015_HEPG2_48H:J12 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description tretinoin 11.14 um perturbation at 48 h in HEPG2 (Carcinogenome)
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Genes

41 genes differentially expressed following the CRCGN015_HEPG2_48H:J12 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
HOXA5 homeobox A5 5.41041
AKT1 v-akt murine thymoma viral oncogene homolog 1 3.7843
FPGS folylpolyglutamate synthase 3.16904
SPAG4 sperm associated antigen 4 3.15571
KLHDC2 kelch domain containing 2 3.14214
C5 complement component 5 3.13171
PDLIM1 PDZ and LIM domain 1 3.12475
GFOD1 glucose-fructose oxidoreductase domain containing 1 3.06545
ADO 2-aminoethanethiol (cysteamine) dioxygenase 2.87593
FZD7 frizzled class receptor 7 2.79089
MEF2C myocyte enhancer factor 2C 2.6114
ECH1 enoyl CoA hydratase 1, peroxisomal 2.45187
HOXA7 homeobox A7 2.36576
HOXA4 homeobox A4 2.35059
TSKU tsukushi, small leucine rich proteoglycan 2.32079
APOE apolipoprotein E 2.30265
PYGL phosphorylase, glycogen, liver 2.26537
RTL10 retrotransposon Gag like 10 2.24556
THTPA thiamine triphosphatase 2.2236
CASP3 caspase 3, apoptosis-related cysteine peptidase 2.17637
GSTM2 glutathione S-transferase mu 2 (muscle) 2.07544
SFTPB surfactant protein B 2.03962

decreased expression

Symbol Name Standardized Value
IER3 immediate early response 3 -3.79763
DUSP6 dual specificity phosphatase 6 -3.69715
MT1X metallothionein 1X -2.94547
HMGA2 high mobility group AT-hook 2 -2.89227
PUF60 poly-U binding splicing factor 60KDa -2.78995
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -2.64928
SOX17 SRY (sex determining region Y)-box 17 -2.41672
FAT1 FAT atypical cadherin 1 -2.3409
CETN3 centrin, EF-hand protein, 3 -2.30167
LOC124907782 dual specificity protein phosphatase 22 -2.29975
INPP1 inositol polyphosphate-1-phosphatase -2.23534
GNG11 guanine nucleotide binding protein (G protein), gamma 11 -2.19067
SLC35F2 solute carrier family 35, member F2 -2.14085
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F -2.13456
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11 -2.12317
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -2.1185
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 -2.02847
UGDH UDP-glucose 6-dehydrogenase -2.02607
JAM3 junctional adhesion molecule 3 -2.00923