CRCGN015_MCF10A.TP53.M_24H:D11 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description metronidazole 34.5 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

76 genes differentially expressed following the CRCGN015_MCF10A.TP53.M_24H:D11 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
CCP110 centriolar coiled coil protein 110kDa 5.0
AGR2 anterior gradient 2 4.96965
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 4.95365
CXCR4 chemokine (C-X-C motif) receptor 4 4.46852
E2F2 E2F transcription factor 2 3.88015
HBB hemoglobin, beta 3.64843
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 3.54033
HBA1 hemoglobin, alpha 1 3.40892
TLCD3A TLC domain containing 3A 3.07025
SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 2.98073
COMP cartilage oligomeric matrix protein 2.9067
SP3 Sp3 transcription factor 2.74965
REV1 REV1, polymerase (DNA directed) 2.71215
CDT1 chromatin licensing and DNA replication factor 1 2.68145
CNRIP1 cannabinoid receptor interacting protein 1 2.61565
OXCT1 3-oxoacid CoA transferase 1 2.6014
TMEM131L transmembrane 131 like 2.5429
GLI2 GLI family zinc finger 2 2.42883
SPTSSA serine palmitoyltransferase, small subunit A 2.406
UFSP2 UFM1-specific peptidase 2 2.38975
MEN1 multiple endocrine neoplasia I 2.37255
RNF111 ring finger protein 111 2.3237
SPCS3 signal peptidase complex subunit 3 homolog (S. cerevisiae) 2.3161
EFNA4 ephrin-A4 2.31225
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.29765
ELF2 E74-like factor 2 (ets domain transcription factor) 2.29515
SQOR sulfide quinone oxidoreductase 2.2427
CBR4 carbonyl reductase 4 2.2383
EAPP E2F-associated phosphoprotein 2.1802
ZNF239 zinc finger protein 239 2.1769
MED28 mediator complex subunit 28 2.16875
METTL4 methyltransferase like 4 2.15705
EXPH5 exophilin 5 2.1495
RSBN1 round spermatid basic protein 1 2.1409
ACAD8 acyl-CoA dehydrogenase family, member 8 2.13125
PSRC1 proline/serine-rich coiled-coil 1 2.1147
EDN1 endothelin 1 2.09265
NREP neuronal regeneration related protein 2.0407
DDB1 damage-specific DNA binding protein 1, 127kDa 2.0365
NR3C2 nuclear receptor subfamily 3, group C, member 2 2.02625
AARSD1 alanyl-tRNA synthetase domain containing 1 2.0183
GSTZ1 glutathione S-transferase zeta 1 2.017
CENPC centromere protein C 2.00545
MMP1 matrix metallopeptidase 1 2.005

decreased expression

Symbol Name Standardized Value
COG7 component of oligomeric golgi complex 7 -5.2813
RNF167 ring finger protein 167 -4.88025
BAG3 BCL2-associated athanogene 3 -4.81145
CCNB1 cyclin B1 -4.6908
SNCA synuclein, alpha (non A4 component of amyloid precursor) -4.2325
RALGDS ral guanine nucleotide dissociation stimulator -4.06308
RNF125 ring finger protein 125, E3 ubiquitin protein ligase -3.39
RBM34 RNA binding motif protein 34 -3.25032
TRMT2B tRNA methyltransferase 2 homolog B (S. cerevisiae) -3.2367
BASP1 brain abundant, membrane attached signal protein 1 -3.1555
ANKRD10 ankyrin repeat domain 10 -3.14555
GZMM granzyme M (lymphocyte met-ase 1) -2.7958
CERT1 ceramide transporter 1 -2.55425
BABAM2 BRISC and BRCA1 A complex member 2 -2.52582
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -2.38265
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1 -2.3228
CORO1C coronin, actin binding protein, 1C -2.3099
POLL polymerase (DNA directed), lambda -2.28865
SCNN1B sodium channel, non voltage gated 1 beta subunit -2.2361
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 -2.22285
KDM3A lysine (K)-specific demethylase 3A -2.20345
PTPN7 protein tyrosine phosphatase, non-receptor type 7 -2.19465
DCTN5 dynactin 5 (p25) -2.16372
GRWD1 glutamate-rich WD repeat containing 1 -2.1631
TBKBP1 TBK1 binding protein 1 -2.1541
NCKAP1L NCK-associated protein 1-like -2.11112
PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) -2.09905
SQSTM1 sequestosome 1 -2.09667
NOP2 NOP2 nucleolar protein -2.0403
CXCR3 chemokine (C-X-C motif) receptor 3 -2.0395
PRR13 proline rich 13 -2.0093
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C -2.0001