CRCGN015_MCF10A.TP53.M_24H:G22 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description 4,8-dihydroxy-2-quinolinecarboxylic acid 99.88 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

279 genes differentially expressed following the CRCGN015_MCF10A.TP53.M_24H:G22 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
LAGE3 L antigen family, member 3 10.0
KDM5D lysine (K)-specific demethylase 5D 8.5348
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 7.43805
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast) 7.1024
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 6.52785
USP9Y ubiquitin specific peptidase 9, Y-linked 6.0452
ZFY zinc finger protein, Y-linked 5.8962
WIF1 WNT inhibitory factor 1 5.5248
APTX aprataxin 5.1636
DENND2D DENN/MADD domain containing 2D 4.6111
MRM3 mitochondrial rRNA methyltransferase 3 4.499
SLC10A3 solute carrier family 10, member 3 4.2103
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 4.1037
F8A2 coagulation factor VIII-associated 2 4.0864
MKNK1 MAP kinase interacting serine/threonine kinase 1 4.0258
VAMP7 vesicle-associated membrane protein 7 3.9132
NLGN4Y neuroligin 4, Y-linked 3.8816
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 3.80183
SSR4 signal sequence receptor, delta 3.6983
FAM3A family with sequence similarity 3, member A 3.5586
TRAPPC6A trafficking protein particle complex 6A 3.2753
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 3.2517
CMC4 C-x(9)-C motif containing 4 3.2482
VBP1 von Hippel-Lindau binding protein 1 3.198
HBE1 hemoglobin, epsilon 1 3.1767
NANS N-acetylneuraminic acid synthase 3.1551
BAMBI BMP and activin membrane-bound inhibitor 3.0962
BBLN bublin coiled coil protein 3.0524
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F 3.0147
ACBD3 acyl-CoA binding domain containing 3 2.99975
UBL4A ubiquitin-like 4A 2.9709
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 2.968
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 2.9316
TFB2M transcription factor B2, mitochondrial 2.9284
DNASE1L1 deoxyribonuclease I-like 1 2.9122
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor 2.9108
FAM50A family with sequence similarity 50, member A 2.9006
MLST8 MTOR associated protein, LST8 homolog (S. cerevisiae) 2.8619
TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 2.8295
LYRM1 LYR motif containing 1 2.8228
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A 2.8101
TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase 2.78955
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2.7741
IDH3G isocitrate dehydrogenase 3 (NAD+) gamma 2.7692
HOXB13 homeobox B13 2.7505
TBPL1 TBP-like 1 2.636
CDC37L1 cell division cycle 37-like 1 2.6208
CETN2 centrin, EF-hand protein, 2 2.59
MACROD1 MACRO domain containing 1 2.5654
DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2.5568
FMR1 fragile X mental retardation 1 2.5363
SCAND1 SCAN domain containing 1 2.5229
UGP2 UDP-glucose pyrophosphorylase 2 2.5159
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 2.5139
EOLA1 endothelium and lymphocyte associated ASCH domain 1 2.4458
GFRA1 GDNF family receptor alpha 1 2.4398
RPS4Y1 ribosomal protein S4, Y-linked 1 2.436
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1 2.4233
IGFBP3 insulin-like growth factor binding protein 3 2.42275
UROS uroporphyrinogen III synthase 2.4201
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 2.42005
MPC1 mitochondrial pyruvate carrier 1 2.4167
ERBIN erbb2 interacting protein 2.3961
ASB13 ankyrin repeat and SOCS box containing 13 2.3863
TMSB4Y thymosin beta 4, Y-linked 2.3664
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 2.3533
PEX11B peroxisomal biogenesis factor 11 beta 2.3379
DNAAF2 dynein, axonemal, assembly factor 2 2.3356
RWDD2B RWD domain containing 2B 2.3354
ANKRD28 ankyrin repeat domain 28 2.3235
SESN1 sestrin 1 2.3214
BCAS2 breast carcinoma amplified sequence 2 2.3174
ARL2 ADP-ribosylation factor-like 2 2.3084
CASP8AP2 caspase 8 associated protein 2 2.2987
COX6A1 cytochrome c oxidase subunit VIa polypeptide 1 2.2897
SOCS2 suppressor of cytokine signaling 2 2.2897
HPRT1 hypoxanthine phosphoribosyltransferase 1 2.286
F8 coagulation factor VIII, procoagulant component 2.2857
NDUFA7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa 2.2722
DGCR6L DiGeorge syndrome critical region gene 6-like 2.2599
VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae) 2.2519
GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa 2.2515
FLNA filamin A, alpha 2.24937
TSEN34 TSEN34 tRNA splicing endonuclease subunit 2.2446
GOLPH3L golgi phosphoprotein 3-like 2.228
PDLIM1 PDZ and LIM domain 1 2.2262
GCC1 GRIP and coiled-coil domain containing 1 2.2204
KANK1 KN motif and ankyrin repeat domains 1 2.2152
FBXO5 F-box protein 5 2.2139
MRPL30 mitochondrial ribosomal protein L30 2.2096
RBMY1J RNA binding motif protein, Y-linked, family 1, member J 2.2062
ARID4B AT rich interactive domain 4B (RBP1-like) 2.2051
GDI1 GDP dissociation inhibitor 1 2.2007
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle 2.2006
SPINK4 serine peptidase inhibitor, Kazal type 4 2.1988
CCDC59 coiled-coil domain containing 59 2.1982
BET1 Bet1 golgi vesicular membrane trafficking protein 2.1858
MECP2 methyl CpG binding protein 2 2.17283
PEX10 peroxisomal biogenesis factor 10 2.1637
NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 2.1636
DAZAP2 DAZ associated protein 2 2.1632
GTF2H5 general transcription factor IIH, polypeptide 5 2.1491
FAF1 Fas (TNFRSF6) associated factor 1 2.1474
DAZ2 deleted in azoospermia 2 2.14408
RABL3 RAB, member of RAS oncogene family-like 3 2.138
FOXRED2 FAD-dependent oxidoreductase domain containing 2 2.1299
COPS7A COP9 signalosome subunit 7A 2.1119
NISCH nischarin 2.1119
BGLAP bone gamma-carboxyglutamate (gla) protein 2.1092
KRCC1 lysine-rich coiled-coil 1 2.1078
GAMT guanidinoacetate N-methyltransferase 2.1049
ERI3 ERI1 exoribonuclease family member 3 2.0956
NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa 2.0844
PPP6C protein phosphatase 6, catalytic subunit 2.08335
BCAP31 B-cell receptor-associated protein 31 2.0833
YTHDC1 YTH domain containing 1 2.0803
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 2.0796
HEMK2 HemK methyltransferase 2, ETF1 glutamine and histone H4 lysine 2.0748
IRAK1 interleukin-1 receptor-associated kinase 1 2.071
RWDD1 RWD domain containing 1 2.0707
PLEKHA5 pleckstrin homology domain containing, family A member 5 2.0643
ICOS inducible T-cell co-stimulator 2.0626
SCAI suppressor of cancer cell invasion 2.056
ZC3H4 zinc finger CCCH-type containing 4 2.0548
DAD1 defender against cell death 1 2.0527
SERF2 small EDRK-rich factor 2 2.04433
THTPA thiamine triphosphatase 2.0424
SH3YL1 SH3 and SYLF domain containing 1 2.0345
WTAP Wilms tumor 1 associated protein 2.03285
TENT2 terminal nucleotidyltransferase 2 2.0325
ZNF668 zinc finger protein 668 2.028
CSF3R colony stimulating factor 3 receptor (granulocyte) 2.0241
LUM lumican 2.0228
CRYZ crystallin, zeta (quinone reductase) 2.0188
MVP major vault protein 2.0134
KCMF1 potassium channel modulatory factor 1 2.0128
MAIP1 matrix AAA peptidase interacting protein 1 2.0042
TMEM187 transmembrane protein 187 2.0028
SIX1 SIX homeobox 1 2.0021

decreased expression

Symbol Name Standardized Value
NUP85 nucleoporin 85kDa -10.0
SMC1A structural maintenance of chromosomes 1A -6.6136
MRPS7 mitochondrial ribosomal protein S7 -6.2535
KDM5C lysine (K)-specific demethylase 5C -5.9509
PUDP pseudouridine 5'-phosphatase -5.7204
TMEM94 transmembrane protein 94 -5.3483
LOC124905557 eukaryotic translation initiation factor 1A, X-chromosomal -4.99883
PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1 -4.9882
SAP30BP SAP30 binding protein -4.7101
GRWD1 glutamate-rich WD repeat containing 1 -4.6445
MRPL58 mitochondrial ribosomal protein L58 -4.6262
KDM6A lysine (K)-specific demethylase 6A -4.56747
NAT9 N-acetyltransferase 9 (GCN5-related, putative) -4.4715
LLGL2 lethal giant larvae homolog 2 (Drosophila) -4.3802
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 -4.37485
KCTD2 potassium channel tetramerization domain containing 2 -4.1304
ACOX1 acyl-CoA oxidase 1, palmitoyl -3.92525
UBA1 ubiquitin-like modifier activating enzyme 1 -3.858
SUMO4 small ubiquitin-like modifier 4 -3.8472
JPT1 Jupiter microtubule associated homolog 1 -3.7908
NT5C 5', 3'-nucleotidase, cytosolic -3.6533
CASKIN2 CASK interacting protein 2 -3.54525
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 -3.4374
UCKL1 uridine-cytidine kinase 1-like 1 -3.4351
CDR2L cerebellar degeneration-related protein 2-like -3.2746
WBP2 WW domain binding protein 2 -3.2524
MAP3K6 mitogen-activated protein kinase kinase kinase 6 -3.1442
CBR3 carbonyl reductase 3 -3.0844
LIPG lipase, endothelial -3.0833
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -3.05464
DELE1 DAP3 binding cell death enhancer 1 -3.03165
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit -2.9276
PNPLA4 patatin-like phospholipase domain containing 4 -2.8667
BRD9 bromodomain containing 9 -2.8603
SNX7 sorting nexin 7 -2.8554
WDR11 WD repeat domain 11 -2.838
TRAPPC2 trafficking protein particle complex 2 -2.83285
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) -2.82505
CENPT centromere protein T -2.8201
NIT1 nitrilase 1 -2.75
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha -2.7307
H3-3B H3.3 histone B -2.70722
CCNL2 cyclin L2 -2.7033
CLASRP CLK4-associating serine/arginine rich protein -2.6981
SDK2 sidekick cell adhesion molecule 2 -2.6882
TPPP3 tubulin polymerization-promoting protein family member 3 -2.6832
CAVIN3 caveolae associated protein 3 -2.6701
CASP3 caspase 3, apoptosis-related cysteine peptidase -2.6561
GRB2 growth factor receptor-bound protein 2 -2.6448
SEPTIN6 septin 6 -2.61734
GPS1 G protein pathway suppressor 1 -2.6071
ZNF266 zinc finger protein 266 -2.6052
TPPP tubulin polymerization promoting protein -2.6025
KLF7 Kruppel-like factor 7 (ubiquitous) -2.5916
TPGS1 tubulin polyglutamylase complex subunit 1 -2.5709
NSUN3 NOP2/Sun domain family, member 3 -2.5449
SLC16A2 solute carrier family 16, member 2 (thyroid hormone transporter) -2.5325
BCL6 B-cell CLL/lymphoma 6 -2.53095
SGSH N-sulfoglucosamine sulfohydrolase -2.53035
TTC12 tetratricopeptide repeat domain 12 -2.5288
SLC38A12 solute carrier family 38 member 12 -2.5006
LARP7 La ribonucleoprotein domain family, member 7 -2.4986
ENGASE endo-beta-N-acetylglucosaminidase -2.47945
USP9X ubiquitin specific peptidase 9, X-linked -2.4756
ECHDC2 enoyl CoA hydratase domain containing 2 -2.4703
RGS2 regulator of G-protein signaling 2 -2.4657
HGS hepatocyte growth factor-regulated tyrosine kinase substrate -2.4652
LHFPL6 LHFPL tetraspan subfamily member 6 -2.4601
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae) -2.4378
PALLD palladin, cytoskeletal associated protein -2.40993
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -2.4
CDK5RAP3 CDK5 regulatory subunit associated protein 3 -2.3894
OFD1 oral-facial-digital syndrome 1 -2.3721
SCARA3 scavenger receptor class A, member 3 -2.3704
MEFV Mediterranean fever -2.3664
PRCP prolylcarboxypeptidase (angiotensinase C) -2.362
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -2.34877
DIO3 deiodinase, iodothyronine, type III -2.3426
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 -2.3253
NOD1 nucleotide-binding oligomerization domain containing 1 -2.3109
PRSS22 protease, serine, 22 -2.3031
STS steroid sulfatase (microsomal), isozyme S -2.28615
RASL12 RAS-like, family 12 -2.2648
LMTK1 lemur tail kinase 1 -2.2644
RRM1 ribonucleotide reductase M1 -2.26135
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 -2.2379
MRNIP MRN complex interacting protein -2.2316
TUBA4A tubulin, alpha 4a -2.2245
LONP1 lon peptidase 1, mitochondrial -2.224
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 -2.2157
INTS11 integrator complex subunit 11 -2.2101
CILP cartilage intermediate layer protein, nucleotide pyrophosphohydrolase -2.2075
TNNC2 troponin C type 2 (fast) -2.2071
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -2.2055
ZNF516 zinc finger protein 516 -2.2032
MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow -2.1906
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) -2.1882
IMMT inner membrane protein, mitochondrial -2.178
POMT2 protein-O-mannosyltransferase 2 -2.1762
SLC16A5 solute carrier family 16 (monocarboxylate transporter), member 5 -2.16715
ACE2 angiotensin I converting enzyme 2 -2.16085
GSTM5 glutathione S-transferase mu 5 -2.1601
THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) -2.1589
PDGFRB platelet-derived growth factor receptor, beta polypeptide -2.1555
TUBA3C tubulin, alpha 3c -2.147
ADRM1 adhesion regulating molecule 1 -2.1459
SCHIP1 schwannomin interacting protein 1 -2.1454
DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 -2.14187
CSE1L CSE1 chromosome segregation 1-like (yeast) -2.1395
SPAG1 sperm associated antigen 1 -2.1373
ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 -2.13435
PIBF1 progesterone immunomodulatory binding factor 1 -2.1311
SDC2 syndecan 2 -2.12443
ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 -2.12435
PIK3IP1 phosphoinositide-3-kinase interacting protein 1 -2.11925
CCDC47 coiled-coil domain containing 47 -2.1173
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 -2.1107
ZC4H2 zinc finger, C4H2 domain containing -2.1097
DAND5 DAN domain family member 5, BMP antagonist -2.107
CES1 carboxylesterase 1 -2.1041
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -2.0866
ZNF816 zinc finger protein 816 -2.0766
HOXC4 homeobox C4 -2.0754
DGKD diacylglycerol kinase, delta 130kDa -2.0722
AP5Z1 adaptor-related protein complex 5, zeta 1 subunit -2.07095
UBE2O ubiquitin-conjugating enzyme E2O -2.0656
BLVRA biliverdin reductase A -2.05787
TTR transthyretin -2.04845
TTC31 tetratricopeptide repeat domain 31 -2.0448
NOTCH4 notch 4 -2.0381
BRD7 bromodomain containing 7 -2.0336
SYNE3 spectrin repeat containing, nuclear envelope family member 3 -2.032
NR0B2 nuclear receptor subfamily 0, group B, member 2 -2.028
FHIP2B FHF complex subunit HOOK interacting protein 2B -2.0277
MED24 mediator complex subunit 24 -2.0243
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 -2.0187
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) -2.0176
INPPL1 inositol polyphosphate phosphatase-like 1 -2.0163
MSL1 male-specific lethal 1 homolog (Drosophila) -2.0074
ZFP36 ZFP36 ring finger protein -2.0041