CRCGN015_MCF10A_48H:G03 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description nifedipine 11.22 um perturbation at 48 h in MCF10A (Carcinogenome)
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Genes

65 genes differentially expressed following the CRCGN015_MCF10A_48H:G03 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
PRR7 proline rich 7 (synaptic) 4.95435
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma 4.9035
STAP2 signal transducing adaptor family member 2 3.9773
RPIA ribose 5-phosphate isomerase A 3.85645
NPM3 nucleophosmin/nucleoplasmin 3 3.20545
PYCR1 pyrroline-5-carboxylate reductase 1 2.7997
MSRA methionine sulfoxide reductase A 2.7382
TLCD3A TLC domain containing 3A 2.5526
NT5DC2 5'-nucleotidase domain containing 2 2.51425
PLEKHJ1 pleckstrin homology domain containing, family J member 1 2.41935
NABP2 nucleic acid binding protein 2 2.39505
ZNF146 zinc finger protein 146 2.3887
ZBTB32 zinc finger and BTB domain containing 32 2.35385
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 2.3401
SNCAIP synuclein, alpha interacting protein 2.23885
WRAP73 WD repeat containing, antisense to TP73 2.21845
GSTZ1 glutathione S-transferase zeta 1 2.1764
E2F5 E2F transcription factor 5, p130-binding 2.1531
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 2.1286
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 2.0925
MYOD1 myogenic differentiation 1 2.0885
ZNF556 zinc finger protein 556 2.08425
AKT2 v-akt murine thymoma viral oncogene homolog 2 2.07778
PAK1IP1 PAK1 interacting protein 1 2.0699
RAB5C RAB5C, member RAS oncogene family 2.06335
CCDC86 coiled-coil domain containing 86 2.06125
GPR18 G protein-coupled receptor 18 2.0589
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) 2.01435
POLR1F RNA polymerase I subunit F 2.0129
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 2.01272
HDHD5 haloacid dehalogenase like hydrolase domain containing 5 2.0104

decreased expression

Symbol Name Standardized Value
GRN granulin -6.28698
S100A8 S100 calcium binding protein A8 -3.9869
PDLIM1 PDZ and LIM domain 1 -3.18135
ANXA3 annexin A3 -3.03755
KRT14 keratin 14, type I -3.018
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase -2.89295
YY1AP1 YY1 associated protein 1 -2.86445
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -2.7598
ATG3 autophagy related 3 -2.74503
GLOD4 glyoxalase domain containing 4 -2.65085
CCDC28A coiled-coil domain containing 28A -2.5414
PTBP2 polypyrimidine tract binding protein 2 -2.46175
KIFBP kinesin family binding protein -2.4497
MT2A metallothionein 2A -2.4
PCNP PEST proteolytic signal containing nuclear protein -2.3953
GMPS guanine monphosphate synthase -2.3379
ERCC5 excision repair cross-complementation group 5 -2.29015
CTC1 CTS telomere maintenance complex component 1 -2.27885
SREBF1 sterol regulatory element binding transcription factor 1 -2.2663
KHDC4 KH domain containing 4, pre-mRNA splicing factor -2.26175
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) -2.2356
CFP complement factor properdin -2.2263
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) -2.22592
CCDC92 coiled-coil domain containing 92 -2.215
SLC31A2 solute carrier family 31 (copper transporter), member 2 -2.20405
STXBP2 syntaxin binding protein 2 -2.18995
TFG TRK-fused gene -2.1654
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) -2.10095
CTDSP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 -2.06575
MACO1 macoilin 1 -2.04535
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 -2.03422
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) -2.0096
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B -2.0045
SIGLEC15 sialic acid binding Ig-like lectin 15 -2.00265