CRCGN016_MCF10A.TP53.M_24H:P11 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description leucomalachite green 32.95 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

248 genes differentially expressed following the CRCGN016_MCF10A.TP53.M_24H:P11 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 9.27189
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 7.65692
XPOT exportin, tRNA 5.03518
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 4.87641
ASNS asparagine synthetase (glutamine-hydrolyzing) 4.8624
SSBP2 single-stranded DNA binding protein 2 4.83159
ALAS1 5'-aminolevulinate synthase 1 4.76622
AARS1 alanyl-tRNA synthetase 1 4.62994
PHGDH phosphoglycerate dehydrogenase 4.52901
CHAC1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1 4.48267
GLRX glutaredoxin (thioltransferase) 4.36922
CXCL2 chemokine (C-X-C motif) ligand 2 4.26472
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 4.25956
AMDHD2 amidohydrolase domain containing 2 3.99258
KDM5D lysine (K)-specific demethylase 5D 3.86123
TXNRD1 thioredoxin reductase 1 3.58479
CETN3 centrin, EF-hand protein, 3 3.50317
GARS1 glycyl-tRNA synthetase 1 3.44486
USP9Y ubiquitin specific peptidase 9, Y-linked 3.43908
ACAA1 acetyl-CoA acyltransferase 1 3.42532
CTSL cathepsin L 3.40654
PSAT1 phosphoserine aminotransferase 1 3.35619
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 3.29263
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 3.24015
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 3.2285
EDEM1 ER degradation enhancer, mannosidase alpha-like 1 3.08932
TERF2IP telomeric repeat binding factor 2, interacting protein 2.9768
ZCCHC8 zinc finger, CCHC domain containing 8 2.95677
MARS1 methionyl-tRNA synthetase 1 2.90208
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 2.88753
ODR4 odr-4 GPCR localization factor homolog 2.84699
LMO4 LIM domain only 4 2.82297
CXCL3 chemokine (C-X-C motif) ligand 3 2.80581
UFM1 ubiquitin-fold modifier 1 2.78663
FYN FYN proto-oncogene, Src family tyrosine kinase 2.76614
TRIB3 tribbles pseudokinase 3 2.75944
HMOX1 heme oxygenase 1 2.73429
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 2.73214
LOC128125814 uncharacterized LOC128125814 2.72269
CARS1 cysteinyl-tRNA synthetase 1 2.71846
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 2.68516
SEC63 SEC63 homolog (S. cerevisiae) 2.66455
STK10 serine/threonine kinase 10 2.66152
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 2.6568
CAPRIN2 caprin family member 2 2.61834
HMGA2 high mobility group AT-hook 2 2.5834
LPGAT1 lysophosphatidylglycerol acyltransferase 1 2.55598
ACTR6 ARP6 actin-related protein 6 homolog (yeast) 2.48483
ATP11B ATPase, class VI, type 11B 2.48285
SQSTM1 sequestosome 1 2.46843
IL24 interleukin 24 2.43063
GOLGA3 golgin A3 2.42508
CEP290 centrosomal protein 290kDa 2.41978
IL1A interleukin 1, alpha 2.40932
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 2.40851
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 2.40828
ATF4 activating transcription factor 4 2.40618
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 2.40419
EFEMP2 EGF containing fibulin-like extracellular matrix protein 2 2.38334
SKIC3 SKI3 subunit of superkiller complex 2.38295
TMEM50A transmembrane protein 50A 2.3718
DNAJB2 DnaJ (Hsp40) homolog, subfamily B, member 2 2.36412
PROS1 protein S (alpha) 2.35312
IFRD1 interferon-related developmental regulator 1 2.3459
ACSS3 acyl-CoA synthetase short-chain family member 3 2.33885
PRELID3B PRELI domain containing 3B 2.33737
SQOR sulfide quinone oxidoreductase 2.33475
EMC2 ER membrane protein complex subunit 2 2.31807
FAM169A family with sequence similarity 169, member A 2.31716
LOC122526780 uncharacterized LOC122526780 2.31533
NARS1 asparaginyl-tRNA synthetase 1 2.31193
ARID3A AT rich interactive domain 3A (BRIGHT-like) 2.30864
VSIG2 V-set and immunoglobulin domain containing 2 2.28937
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 2.28869
DENR density-regulated protein 2.27451
SARS1 seryl-tRNA synthetase 1 2.27217
SECISBP2 SECIS binding protein 2 2.27139
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 2.26779
CHIC2 cysteine-rich hydrophobic domain 2 2.24548
FBLN2 fibulin 2 2.24427
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 2.2408
FHL2 four and a half LIM domains 2 2.23771
WARS1 tryptophanyl-tRNA synthetase 1 2.23405
TGIF1 TGFB-induced factor homeobox 1 2.2298
ECT2 epithelial cell transforming 2 2.21201
IL1B interleukin 1, beta 2.2083
ZNF23 zinc finger protein 23 2.20493
LGMN legumain 2.18448
SOCS2 suppressor of cytokine signaling 2 2.17976
SPRY2 sprouty homolog 2 (Drosophila) 2.17821
TXLNA taxilin alpha 2.17277
GFPT1 glutamine--fructose-6-phosphate transaminase 1 2.17156
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 2.17041
TMEM267 transmembrane protein 267 2.16446
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 2.14467
YARS1 tyrosyl-tRNA synthetase 1 2.13857
NT5M 5',3'-nucleotidase, mitochondrial 2.13167
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10 2.11825
IL3RA interleukin 3 receptor, alpha (low affinity) 2.11433
DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 2.11285
MCUR1 mitochondrial calcium uniporter regulator 1 2.11258
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A 2.09897
CCPG1 cell cycle progression 1 2.09709
NLGN4Y neuroligin 4, Y-linked 2.09176
DNAJC24 DnaJ (Hsp40) homolog, subfamily C, member 24 2.09
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 2.08798
UFL1 UFM1-specific ligase 1 2.08743
FGF17 fibroblast growth factor 17 2.08383
CCP110 centriolar coiled coil protein 110kDa 2.07468
BACE2 beta-site APP-cleaving enzyme 2 2.07404
IARS1 isoleucyl-tRNA synthetase 1 2.06286
HPD 4-hydroxyphenylpyruvate dioxygenase 2.05836
COL16A1 collagen, type XVI, alpha 1 2.05825
PCDH9 protocadherin 9 2.0538
PDE3B phosphodiesterase 3B, cGMP-inhibited 2.0521
LOC124900388 uncharacterized LOC124900388 2.0484
ATF3 activating transcription factor 3 2.04569
GPN3 GPN-loop GTPase 3 2.03769
TRIM5 tripartite motif containing 5 2.03762
LOC102724560 cystathionine beta-synthase 2.03519
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 2.03161
EGR1 early growth response 1 2.02056
GPALPP1 GPALPP motifs containing 1 2.01552
NIT1 nitrilase 1 2.00899
ISCU iron-sulfur cluster assembly enzyme 2.00851
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 2.00553
RXYLT1 ribitol xylosyltransferase 1 2.00028

decreased expression

Symbol Name Standardized Value
TCTA T-cell leukemia translocation altered -7.84525
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11 -7.33623
COG7 component of oligomeric golgi complex 7 -6.63841
HSPB1 heat shock 27kDa protein 1 -5.27398
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase -5.02349
ITFG1 integrin alpha FG-GAP repeat containing 1 -4.97101
CD320 CD320 molecule -4.44722
MSMO1 methylsterol monooxygenase 1 -4.16132
NSDHL NAD(P) dependent steroid dehydrogenase-like -3.80866
TRAP1 TNF receptor-associated protein 1 -3.61308
SH3D19 SH3 domain containing 19 -3.60445
PRR15L proline rich 15-like -3.59177
ANXA2 annexin A2 -3.58129
UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X -3.45828
INSIG1 insulin induced gene 1 -3.41478
VDAC1 voltage-dependent anion channel 1 -3.4039
CENPX centromere protein X -3.37882
SMC1A structural maintenance of chromosomes 1A -3.26084
BZW2 basic leucine zipper and W2 domains 2 -3.25921
MRPS2 mitochondrial ribosomal protein S2 -3.25576
EXOSC4 exosome component 4 -3.1574
UBFD1 ubiquitin family domain containing 1 -3.00886
TKT transketolase -2.95021
ATRIP ATR interacting protein -2.94886
BIRC5 baculoviral IAP repeat containing 5 -2.84255
S100A4 S100 calcium binding protein A4 -2.8266
CENPM centromere protein M -2.81458
TARBP1 TAR (HIV-1) RNA binding protein 1 -2.79376
PSRC1 proline/serine-rich coiled-coil 1 -2.79003
NLRP2B NLR family pyrin domain containing 2B -2.72495
TSPAN6 tetraspanin 6 -2.72235
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -2.72028
SNRNP25 small nuclear ribonucleoprotein 25kDa (U11/U12) -2.71758
TCEA2 transcription elongation factor A (SII), 2 -2.69577
DDTL D-dopachrome tautomerase-like -2.68818
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6 -2.67143
CREB3L4 cAMP responsive element binding protein 3-like 4 -2.66948
PUDP pseudouridine 5'-phosphatase -2.66794
UBA1 ubiquitin-like modifier activating enzyme 1 -2.64053
MRPL12 mitochondrial ribosomal protein L12 -2.6321
SHROOM2 shroom family member 2 -2.61591
CD58 CD58 molecule -2.58478
PAGR1 PAXIP1 associated glutamate-rich protein 1 -2.58242
ELOVL6 ELOVL fatty acid elongase 6 -2.56429
KDM5C lysine (K)-specific demethylase 5C -2.52353
MS4A6A membrane-spanning 4-domains, subfamily A, member 6A -2.52078
RNF40 ring finger protein 40, E3 ubiquitin protein ligase -2.48953
CAV1 caveolin 1, caveolae protein, 22kDa -2.48803
ARFIP2 ADP-ribosylation factor interacting protein 2 -2.46568
LAS1L LAS1-like (S. cerevisiae) -2.46282
DHCR24 24-dehydrocholesterol reductase -2.43684
NUBP2 nucleotide binding protein 2 -2.42546
SREBF2 sterol regulatory element binding transcription factor 2 -2.42542
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast) -2.41057
UFD1 ubiquitin recognition factor in ER associated degradation 1 -2.39564
COA3 cytochrome c oxidase assembly factor 3 -2.39494
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -2.39112
BID BH3 interacting domain death agonist -2.36819
MAPKAPK3 mitogen-activated protein kinase-activated protein kinase 3 -2.35265
CCNB2 cyclin B2 -2.35016
MVP major vault protein -2.34645
NFIL3 nuclear factor, interleukin 3 regulated -2.3441
C1QBP complement component 1, q subcomponent binding protein -2.34067
GPS1 G protein pathway suppressor 1 -2.34007
DCTN5 dynactin 5 (p25) -2.3362
ADNP activity-dependent neuroprotector homeobox -2.31733
ACTN4 actinin, alpha 4 -2.31372
SPPL2A signal peptide peptidase like 2A -2.29978
TTLL12 tubulin tyrosine ligase-like family member 12 -2.29
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) -2.28296
PLK1 polo-like kinase 1 -2.27789
HGS hepatocyte growth factor-regulated tyrosine kinase substrate -2.27212
PFN1 profilin 1 -2.26564
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 -2.25409
ATP13A1 ATPase type 13A1 -2.23732
HSBP1 heat shock factor binding protein 1 -2.23536
FBXO34 F-box protein 34 -2.22954
H2BC5 H2B clustered histone 5 -2.22753
NME1 NME/NM23 nucleoside diphosphate kinase 1 -2.22049
PRMT1 protein arginine methyltransferase 1 -2.21415
IDI1 isopentenyl-diphosphate delta isomerase 1 -2.21406
BCL7C B-cell CLL/lymphoma 7C -2.1858
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) -2.18001
SKAP2 src kinase associated phosphoprotein 2 -2.16742
ACLY ATP citrate lyase -2.16728
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -2.15858
ARHGAP17 Rho GTPase activating protein 17 -2.15469
MPDU1 mannose-P-dolichol utilization defect 1 -2.14898
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast) -2.14766
PSMB6 proteasome (prosome, macropain) subunit, beta type, 6 -2.14631
ALDOC aldolase C, fructose-bisphosphate -2.14131
OXSR1 oxidative stress responsive 1 -2.13734
HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) -2.13173
H2AC19 H2A clustered histone 19 -2.12915
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3 -2.12716
DNAAF5 dynein, axonemal, assembly factor 5 -2.12584
ACACA acetyl-CoA carboxylase alpha -2.12121
DPM3 dolichyl-phosphate mannosyltransferase polypeptide 3 -2.11987
GEMIN6 gem (nuclear organelle) associated protein 6 -2.11431
PCNT pericentrin -2.11177
SF3A1 splicing factor 3a, subunit 1, 120kDa -2.10655
SAMM50 SAMM50 sorting and assembly machinery component -2.10481
XKR8 XK, Kell blood group complex subunit-related family, member 8 -2.09156
TLR3 toll-like receptor 3 -2.08641
LPCAT1 lysophosphatidylcholine acyltransferase 1 -2.08088
ATP6V0B ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b -2.08061
NCKIPSD NCK interacting protein with SH3 domain -2.08052
SRRM1 serine/arginine repetitive matrix 1 -2.07993
TIMM13 translocase of inner mitochondrial membrane 13 homolog (yeast) -2.06456
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7 -2.06185
HMGXB3 HMG box domain containing 3 -2.05221
HOXA5 homeobox A5 -2.04821
PAFAH1B3 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) -2.04392
GDE1 glycerophosphodiester phosphodiesterase 1 -2.0379
MEN1 multiple endocrine neoplasia I -2.03769
POLR2F polymerase (RNA) II (DNA directed) polypeptide F -2.03307
CCNB1 cyclin B1 -2.0296
SCARB1 scavenger receptor class B, member 1 -2.02701
ADI1 acireductone dioxygenase 1 -2.02676
HELZ helicase with zinc finger -2.01659
RBM10 RNA binding motif protein 10 -2.01283