CRCGN016_MCF10A.WT.HP_24H:C05 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description indirubin 33.33 um perturbation at 24 h in MCF10A.WT.HP (Carcinogenome)
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Genes

77 genes differentially expressed following the CRCGN016_MCF10A.WT.HP_24H:C05 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
INTS3 integrator complex subunit 3 4.97635
HMOX1 heme oxygenase 1 4.46177
SPAG4 sperm associated antigen 4 4.43984
TBX2 T-box 2 3.80578
PRKCD protein kinase C, delta 3.35985
SNCA synuclein, alpha (non A4 component of amyloid precursor) 3.29464
AGR2 anterior gradient 2 3.22766
SIRT3 sirtuin 3 3.09173
MAP1S microtubule-associated protein 1S 2.72639
FBXO17 F-box protein 17 2.69546
IL1B interleukin 1, beta 2.68322
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 2.66676
RIC8A RIC8 guanine nucleotide exchange factor A 2.59028
CHMP1A charged multivesicular body protein 1A 2.54507
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 2.53944
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 2.51387
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast) 2.50994
HRAS Harvey rat sarcoma viral oncogene homolog 2.4884
CFAP298 cilia and flagella associated protein 298 2.43451
PIH1D1 PIH1 domain containing 1 2.41407
CGRRF1 cell growth regulator with ring finger domain 1 2.39923
MRPL30 mitochondrial ribosomal protein L30 2.3738
HOXC4 homeobox C4 2.3482
RPN1 ribophorin I 2.28338
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 2.24773
TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast) 2.24084
CFAP69 cilia and flagella associated protein 69 2.2234
CAPN1 calpain 1, (mu/I) large subunit 2.17579
TAOK1 TAO kinase 1 2.17237
WDR19 WD repeat domain 19 2.14433
CCDC85B coiled-coil domain containing 85B 2.12682
TPD52L2 tumor protein D52-like 2 2.11907
PCOLCE procollagen C-endopeptidase enhancer 2.11649
SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 2.08531
ULBP2 UL16 binding protein 2 2.0726
ATP6V0B ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b 2.05613
CCL13 chemokine (C-C motif) ligand 13 2.02514
RASSF7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 2.02234
HOXA3 homeobox A3 2.00657

decreased expression

Symbol Name Standardized Value
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 -4.58678
LYPLA1 lysophospholipase I -4.41154
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -4.37894
NRIP1 nuclear receptor interacting protein 1 -3.93823
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) -3.79052
TLK2 tousled-like kinase 2 -3.60119
MACF1 microtubule-actin crosslinking factor 1 -2.80578
HTN1 histatin 1 -2.7452
DUSP6 dual specificity phosphatase 6 -2.74177
TCTA T-cell leukemia translocation altered -2.60796
EGLN1 egl-9 family hypoxia-inducible factor 1 -2.58557
AQP5 aquaporin 5 -2.51248
LYPLA1-TCEA1 LYPLA1-TCEA1 readthrough -2.37225
CASC3 cancer susceptibility candidate 3 -2.3317
ANKRD10 ankyrin repeat domain 10 -2.32454
DEFA3 defensin, alpha 3, neutrophil-specific -2.26768
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 -2.25914
PRRC1 proline-rich coiled-coil 1 -2.23952
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta -2.23805
ELP3 elongator acetyltransferase complex subunit 3 -2.22987
SUN2 Sad1 and UNC84 domain containing 2 -2.22274
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) -2.22035
TOPBP1 topoisomerase (DNA) II binding protein 1 -2.20917
PRKCH protein kinase C, eta -2.20836
CDK20 cyclin-dependent kinase 20 -2.20084
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 -2.18077
MBNL3 muscleblind-like splicing regulator 3 -2.16979
HTN3 histatin 3 -2.15672
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit -2.13508
TRAP1 TNF receptor-associated protein 1 -2.11715
KDM3A lysine (K)-specific demethylase 3A -2.07103
CALML5 calmodulin-like 5 -2.0581
KCNJ12 potassium channel, inwardly rectifying subfamily J, member 12 -2.05801
CITED1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 -2.04002
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -2.02846
AK4 adenylate kinase 4 -2.0225
GOLGA7 golgin A7 -2.01092
MFSD6 major facilitator superfamily domain containing 6 -2.00837