CRCGN017_MCF10A.TP53.M_24H:J08 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description oxytetracycline.hcl 33.27 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

97 genes differentially expressed following the CRCGN017_MCF10A.TP53.M_24H:J08 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 5.7043
PYCR1 pyrroline-5-carboxylate reductase 1 5.39664
PHGDH phosphoglycerate dehydrogenase 5.2127
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 4.95085
ASNS asparagine synthetase (glutamine-hydrolyzing) 4.75303
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 4.53634
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 4.05608
CHAC1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1 4.02549
HBA1 hemoglobin, alpha 1 4.00487
PSAT1 phosphoserine aminotransferase 1 3.92692
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 3.84344
AARS1 alanyl-tRNA synthetase 1 3.82246
MYLK myosin light chain kinase 3.4938
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 3.02943
WIF1 WNT inhibitory factor 1 2.95594
ATP11B ATPase, class VI, type 11B 2.86991
CARS1 cysteinyl-tRNA synthetase 1 2.70853
TRIB3 tribbles pseudokinase 3 2.67467
EPRS1 glutamyl-prolyl-tRNA synthetase 1 2.64762
MARS1 methionyl-tRNA synthetase 1 2.59565
CADM1 cell adhesion molecule 1 2.58559
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 2.56341
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 2.56011
SARS1 seryl-tRNA synthetase 1 2.55327
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 2.46171
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 2.44405
EGR1 early growth response 1 2.35305
ATF4 activating transcription factor 4 2.34808
GARS1 glycyl-tRNA synthetase 1 2.29569
LOC102724560 cystathionine beta-synthase 2.29107
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 2.26583
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila) 2.25571
ARL2 ADP-ribosylation factor-like 2 2.22889
PIGF phosphatidylinositol glycan anchor biosynthesis, class F 2.21529
NLRP4 NLR family, pyrin domain containing 4 2.21251
CHMP4B charged multivesicular body protein 4B 2.20047
DDIT4 DNA-damage-inducible transcript 4 2.19622
ADSL adenylosuccinate lyase 2.18719
EIF2D eukaryotic translation initiation factor 2D 2.15326
RBKS ribokinase 2.1375
WARS1 tryptophanyl-tRNA synthetase 1 2.1142
NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 2.05623
CD82 CD82 molecule 2.05591
GDF5 growth differentiation factor 5 2.05546
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2.04942
XPOT exportin, tRNA 2.0262
AGR2 anterior gradient 2 2.01712
THYN1 thymocyte nuclear protein 1 2.01024

decreased expression

Symbol Name Standardized Value
THAP11 THAP domain containing 11 -6.13483
BAG3 BCL2-associated athanogene 3 -4.68572
CYCS cytochrome c, somatic -3.75362
MRPS2 mitochondrial ribosomal protein S2 -3.74568
DIPK1A divergent protein kinase domain 1A -3.73563
UFM1 ubiquitin-fold modifier 1 -3.59829
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -3.33004
BASP1 brain abundant, membrane attached signal protein 1 -3.27748
TCTA T-cell leukemia translocation altered -3.26466
ANXA2 annexin A2 -3.20217
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) -3.14677
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa -3.02342
TRAPPC3 trafficking protein particle complex 3 -2.9609
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6 -2.94688
UBA1 ubiquitin-like modifier activating enzyme 1 -2.94093
NELFB negative elongation factor complex member B -2.89947
COG7 component of oligomeric golgi complex 7 -2.80042
FUBP3 far upstream element (FUSE) binding protein 3 -2.78233
PIERCE1 piercer of microtubule wall 1 -2.77372
MAP7D1 MAP7 domain containing 1 -2.64589
WDR44 WD repeat domain 44 -2.58618
NT5DC2 5'-nucleotidase domain containing 2 -2.57979
UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X -2.577
EDC4 enhancer of mRNA decapping 4 -2.40926
ODF2 outer dense fiber of sperm tails 2 -2.40902
PUDP pseudouridine 5'-phosphatase -2.40647
TIMCC TIM double twin CX3C motif chaperone -2.40047
SMNDC1 survival motor neuron domain containing 1 -2.38634
RAB9A RAB9A, member RAS oncogene family -2.37079
ENDOG endonuclease G -2.36919
LZTFL1 leucine zipper transcription factor-like 1 -2.32259
BBOF1 basal body orientation factor 1 -2.3201
ELAC2 elaC ribonuclease Z 2 -2.30146
PPP1R26 protein phosphatase 1, regulatory subunit 26 -2.27403
JUND jun D proto-oncogene -2.26715
TICAM1 toll-like receptor adaptor molecule 1 -2.26062
INSIG1 insulin induced gene 1 -2.25816
COQ4 coenzyme Q4 -2.25593
MRPS15 mitochondrial ribosomal protein S15 -2.22021
PFN1 profilin 1 -2.21865
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) -2.21473
ANAPC2 anaphase promoting complex subunit 2 -2.19819
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa -2.12322
TPPP3 tubulin polymerization-promoting protein family member 3 -2.11539
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 -2.08162
NUDT19 nudix (nucleoside diphosphate linked moiety X)-type motif 19 -2.06944
HSPB1 heat shock 27kDa protein 1 -2.0678
COX6B1 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) -2.03464
SURF2 surfeit 2 -2.02575