CRCGN017_MCF10A.TP53.M_24H:K02 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description edaravone 33.43 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

44 genes differentially expressed following the CRCGN017_MCF10A.TP53.M_24H:K02 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
ADAM10 ADAM metallopeptidase domain 10 4.7983
KDM5D lysine (K)-specific demethylase 5D 3.43235
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.9918
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 2.82162
MMP1 matrix metallopeptidase 1 2.76472
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 2.61035
GRB10 growth factor receptor-bound protein 10 2.59057
USP9Y ubiquitin specific peptidase 9, Y-linked 2.4292
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 2.38315
PDIA5 protein disulfide isomerase family A, member 5 2.18335
GFOD1 glucose-fructose oxidoreductase domain containing 1 2.1548
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 2.14892
SLCO1B3 solute carrier organic anion transporter family, member 1B3 2.14525
POMC proopiomelanocortin 2.13185
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 2.11382
MINDY2 MINDY lysine 48 deubiquitinase 2 2.07283
PRDX4 peroxiredoxin 4 2.0581
REXO4 REX4, RNA exonuclease 4 homolog (S. cerevisiae) 2.0352

decreased expression

Symbol Name Standardized Value
UFM1 ubiquitin-fold modifier 1 -5.1278
OXA1L oxidase (cytochrome c) assembly 1-like -4.9498
COG2 component of oligomeric golgi complex 2 -4.7989
CD44 CD44 molecule (Indian blood group) -4.79249
VDAC1 voltage-dependent anion channel 1 -4.44172
TARBP1 TAR (HIV-1) RNA binding protein 1 -4.4076
BID BH3 interacting domain death agonist -3.77515
BASP1 brain abundant, membrane attached signal protein 1 -2.88845
GRN granulin -2.51547
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit -2.451
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta -2.4456
PSMG1 proteasome (prosome, macropain) assembly chaperone 1 -2.36485
SMC1A structural maintenance of chromosomes 1A -2.35525
PROSER1 proline and serine rich 1 -2.3458
PAMR1 peptidase domain containing associated with muscle regeneration 1 -2.3157
WBP4 WW domain binding protein 4 -2.27138
SYNGR3 synaptogyrin 3 -2.2425
SLC22A4 solute carrier family 22 (organic cation/zwitterion transporter), member 4 -2.22125
PUDP pseudouridine 5'-phosphatase -2.17125
NR4A2 nuclear receptor subfamily 4, group A, member 2 -2.15887
SPAG7 sperm associated antigen 7 -2.15775
RFC3 replication factor C (activator 1) 3, 38kDa -2.1093
FBXO7 F-box protein 7 -2.1066
KDM5C lysine (K)-specific demethylase 5C -2.0994
LOC124905557 eukaryotic translation initiation factor 1A, X-chromosomal -2.09825
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -2.0288