CRCGN017_MCF10A.TP53.M_24H:M02 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description benzofuran 34.26 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

42 genes differentially expressed following the CRCGN017_MCF10A.TP53.M_24H:M02 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
CERK ceramide kinase 5.1205
HDGFL3 HDGF like 3 3.8088
HYOU1 hypoxia up-regulated 1 3.58605
ACAA1 acetyl-CoA acyltransferase 1 3.52385
RBP4 retinol binding protein 4, plasma 2.99575
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 2.8026
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 2.6305
POLR1D polymerase (RNA) I polypeptide D, 16kDa 2.52828
SRBD1 S1 RNA binding domain 1 2.51815
NKX2-5 NK2 homeobox 5 2.47835
FBXO11 F-box protein 11 2.46693
TMEM208 transmembrane protein 208 2.35385
HOXD11 homeobox D11 2.30505
CENPE centromere protein E, 312kDa 2.2471
EVL Enah/Vasp-like 2.158
NOL8 nucleolar protein 8 2.12525
LHX1 LIM homeobox 1 2.1139
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 2.1052
ALOX12 arachidonate 12-lipoxygenase 2.0772
SEC63 SEC63 homolog (S. cerevisiae) 2.06378
CAAP1 caspase activity and apoptosis inhibitor 1 2.03465
KLK11 kallikrein-related peptidase 11 2.03415
TK1 thymidine kinase 1, soluble 2.0208
SMAD7 SMAD family member 7 2.0107

decreased expression

Symbol Name Standardized Value
CCNB1 cyclin B1 -5.2591
SCYL3 SCY1-like 3 (S. cerevisiae) -5.06225
VAT1 vesicle amine transport 1 -4.9836
AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) -4.58397
CCDC86 coiled-coil domain containing 86 -4.37565
ARPP19 cAMP-regulated phosphoprotein, 19kDa -3.76443
AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) -2.95985
DDB1 damage-specific DNA binding protein 1, 127kDa -2.9125
SAC3D1 SAC3 domain containing 1 -2.7316
POLG2 polymerase (DNA directed), gamma 2, accessory subunit -2.46813
GTF2H2C GTF2H2 family member C -2.4276
FIBP fibroblast growth factor (acidic) intracellular binding protein -2.3093
AURKC aurora kinase C -2.21785
TBCA tubulin folding cofactor A -2.18765
SPIB Spi-B transcription factor (Spi-1/PU.1 related) -2.167
HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) -2.10637
AK6 adenylate kinase 6 -2.05645
GCLM glutamate-cysteine ligase, modifier subunit -2.0204