CRCGN017_MCF10A.TP53.M_24H:N11 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description griseofulvin 33.52 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

122 genes differentially expressed following the CRCGN017_MCF10A.TP53.M_24H:N11 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
CXCL2 chemokine (C-X-C motif) ligand 2 4.9756
H2BC12 H2B clustered histone 12 4.15397
TRIB1 tribbles pseudokinase 1 3.78684
C2CD2 C2 calcium-dependent domain containing 2 3.71949
KCTD5 potassium channel tetramerization domain containing 5 3.71116
ADO 2-aminoethanethiol (cysteamine) dioxygenase 3.43696
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B 3.24332
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) 3.18452
PWP2 PWP2 periodic tryptophan protein homolog (yeast) 2.95434
RGS2 regulator of G-protein signaling 2 2.95305
H2BC9 H2B clustered histone 9 2.86291
RBM28 RNA binding motif protein 28 2.67366
ZNF180 zinc finger protein 180 2.62598
CCR2 chemokine (C-C motif) receptor 2 2.54058
CIAO3 cytosolic iron-sulfur assembly component 3 2.53159
COMP cartilage oligomeric matrix protein 2.47319
TMEM204 transmembrane protein 204 2.43152
H1-2 H1.2 linker histone, cluster member 2.37039
RBM22 RNA binding motif protein 22 2.35999
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1 2.35844
SLC39A14 solute carrier family 39 (zinc transporter), member 14 2.35514
DUSP5 dual specificity phosphatase 5 2.33614
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 2.31214
TNIP1 TNFAIP3 interacting protein 1 2.30251
CERS2 ceramide synthase 2 2.30092
H2AC6 H2A clustered histone 6 2.29287
BIRC3 baculoviral IAP repeat containing 3 2.28968
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 2.27962
TPD52L2 tumor protein D52-like 2 2.26188
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 2.24812
LAP3 leucine aminopeptidase 3 2.24382
RHOG ras homolog family member G 2.24142
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 2.24135
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 2.22307
CX3CR1 chemokine (C-X3-C motif) receptor 1 2.19219
RUBCN rubicon autophagy regulator 2.19202
POLR1G RNA polymerase I subunit G 2.19075
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3 2.17002
THAP1 THAP domain containing, apoptosis associated protein 1 2.16782
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 2.1588
RASIP1 Ras interacting protein 1 2.14541
GATA3 GATA binding protein 3 2.14476
AUNIP aurora kinase A and ninein interacting protein 2.13962
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma 2.13101
GALP galanin-like peptide 2.12652
MIMS2 mitochondrial inner membrane scaffold 2 2.11779
TRAPPC4 trafficking protein particle complex 4 2.10981
H2BC4 H2B clustered histone 4 2.09673
MX1 MX dynamin-like GTPase 1 2.08279
RPAP3 RNA polymerase II associated protein 3 2.06711
GIMAP4 GTPase, IMAP family member 4 2.06535
MED17 mediator complex subunit 17 2.0561
GPATCH1 G patch domain containing 1 2.04878
VRK2 vaccinia related kinase 2 2.03825
SH2B3 SH2B adaptor protein 3 2.03472
ERCC6L excision repair cross-complementation group 6-like 2.03349
HMOX1 heme oxygenase 1 2.00687
MTFR1 mitochondrial fission regulator 1 2.0003

decreased expression

Symbol Name Standardized Value
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide -5.78378
NLRP4 NLR family, pyrin domain containing 4 -4.53776
TARBP1 TAR (HIV-1) RNA binding protein 1 -4.12969
GALE UDP-galactose-4-epimerase -4.0088
CRTAP cartilage associated protein -3.98899
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) -3.95389
CHIC2 cysteine-rich hydrophobic domain 2 -3.5541
CD58 CD58 molecule -3.43785
CDK4 cyclin-dependent kinase 4 -3.29481
TSPAN4 tetraspanin 4 -3.10908
MRPS16 mitochondrial ribosomal protein S16 -3.03707
UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X -3.03061
KRCC1 lysine-rich coiled-coil 1 -3.01069
WASHC3 WASH complex subunit 3 -3.00389
NUSAP1 nucleolar and spindle associated protein 1 -2.91965
ATRAID all-trans retinoic acid-induced differentiation factor -2.83084
PPIC peptidylprolyl isomerase C (cyclophilin C) -2.82163
COXFA4 cytochrome c oxidase associated subunit FA4 -2.80082
CETN3 centrin, EF-hand protein, 3 -2.79569
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle -2.78217
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -2.73517
RPA3 replication protein A3, 14kDa -2.72659
ATP5PF ATP synthase peripheral stalk subunit F6 -2.70781
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1 -2.69335
ATP5MF ATP synthase membrane subunit f -2.60341
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) -2.5933
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) -2.57268
NIPSNAP1 nipsnap homolog 1 (C. elegans) -2.48744
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) -2.46023
ATP5PD ATP synthase peripheral stalk subunit d -2.44443
GNAS GNAS complex locus -2.44058
NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa -2.43245
PLTP phospholipid transfer protein -2.4243
COG4 component of oligomeric golgi complex 4 -2.39864
TRAPPC2L trafficking protein particle complex 2-like -2.38777
FBXO34 F-box protein 34 -2.31418
COX7B cytochrome c oxidase subunit VIIb -2.31317
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -2.31104
CD81 CD81 molecule -2.29266
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial -2.28017
UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI -2.26778
RPL10A ribosomal protein L10a -2.26748
ATP5PO ATP synthase peripheral stalk subunit OSCP -2.26672
ACBD4 acyl-CoA binding domain containing 4 -2.2654
SREBF2 sterol regulatory element binding transcription factor 2 -2.25638
HADH hydroxyacyl-CoA dehydrogenase -2.25074
DNM1 dynamin 1 -2.2172
COX5B cytochrome c oxidase subunit Vb -2.20116
ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide -2.19557
TCTN1 tectonic family member 1 -2.1583
ZMYM2 zinc finger, MYM-type 2 -2.14491
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -2.14339
ACY1 aminoacylase 1 -2.14212
TMA7 translation machinery associated 7 homolog (S. cerevisiae) -2.14012
GDF15 growth differentiation factor 15 -2.12927
ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) -2.11504
ITM2B integral membrane protein 2B -2.09525
HOXB3 homeobox B3 -2.06976
TP53 tumor protein p53 -2.06801
H3-3A H3.3 histone A -2.06224
TSPAN31 tetraspanin 31 -2.05937
PPA2 pyrophosphatase (inorganic) 2 -2.04483
FKBP3 FK506 binding protein 3, 25kDa -2.03677
RUSF1 RUS family member 1 -2.00986