CRCGN017_MCF10A.TP53.M_24H:O01 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description UnTrt perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

95 genes differentially expressed following the CRCGN017_MCF10A.TP53.M_24H:O01 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
PEX11A peroxisomal biogenesis factor 11 alpha 5.743
SSBP2 single-stranded DNA binding protein 2 4.92132
CASP2 caspase 2, apoptosis-related cysteine peptidase 4.64837
RBBP5 retinoblastoma binding protein 5 3.81115
CERK ceramide kinase 3.6068
ARPC4-TTLL3 ARPC4-TTLL3 readthrough 3.20767
NUTF2 nuclear transport factor 2 2.9917
CAPN1 calpain 1, (mu/I) large subunit 2.8439
BAD BCL2-associated agonist of cell death 2.8241
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast) 2.7078
RLIG1 RNA 5'-phosphate and 3'-OH ligase 1 2.70305
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa 2.69805
PPP1R3C protein phosphatase 1, regulatory subunit 3C 2.57995
TMSB15B thymosin beta 15B 2.57425
PECR peroxisomal trans-2-enoyl-CoA reductase 2.5603
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 2.54095
DCTN3 dynactin 3 (p22) 2.5405
MPC2 mitochondrial pyruvate carrier 2 2.52685
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.5124
UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative) 2.46475
NOSIP nitric oxide synthase interacting protein 2.4404
TBX2 T-box 2 2.43108
RAB8A RAB8A, member RAS oncogene family 2.4131
AGR2 anterior gradient 2 2.3779
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3 2.31078
MTA2 metastasis associated 1 family, member 2 2.302
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 2.29745
TBC1D10C TBC1 domain family, member 10C 2.29265
REEP1 receptor accessory protein 1 2.25367
WDR76 WD repeat domain 76 2.24855
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 2.2361
CEPT1 choline/ethanolamine phosphotransferase 1 2.23425
NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) 2.22155
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 2.22005
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 2.2189
NUP54 nucleoporin 54kDa 2.1859
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) 2.16295
ADRB2 adrenoceptor beta 2, surface 2.1572
SNRPF small nuclear ribonucleoprotein polypeptide F 2.15505
LYRM1 LYR motif containing 1 2.13035
BIK BCL2-interacting killer (apoptosis-inducing) 2.11805
TBXA2R thromboxane A2 receptor 2.11578
NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa 2.1127
U2AF2 U2 small nuclear RNA auxiliary factor 2 2.10965
NME7 NME/NM23 family member 7 2.0938
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1 2.0932
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 2.0816
NMU neuromedin U 2.0815
SPEG SPEG complex locus 2.076
LDAF1 lipid droplet assembly factor 1 2.06475
CGRRF1 cell growth regulator with ring finger domain 1 2.0632
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 2.05845
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 2.0402
RWDD1 RWD domain containing 1 2.0256
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) 2.0243
THADA thyroid adenoma associated 2.01215
SPPL2A signal peptide peptidase like 2A 2.00585

decreased expression

Symbol Name Standardized Value
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -5.3371
HMG20B high mobility group 20B -5.29938
PYGL phosphorylase, glycogen, liver -3.08585
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -2.7409
MACF1 microtubule-actin crosslinking factor 1 -2.58174
SLC38A10 solute carrier family 38, member 10 -2.42705
RNF44 ring finger protein 44 -2.3402
BRD7 bromodomain containing 7 -2.33095
MYO5A myosin VA (heavy chain 12, myoxin) -2.3293
MARF1 meiosis regulator and mRNA stability factor 1 -2.2994
NPIPB5 nuclear pore complex interacting protein family, member B5 -2.2967
CES3 carboxylesterase 3 -2.28325
CD1D CD1d molecule -2.27885
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 -2.27057
KAT2A K(lysine) acetyltransferase 2A -2.2606
CSP2 CS pseudogene 2 -2.24923
SULT1B1 sulfotransferase family, cytosolic, 1B, member 1 -2.2219
PCNT pericentrin -2.20965
TRIB3 tribbles pseudokinase 3 -2.20405
RHOG ras homolog family member G -2.1705
TERF2IP telomeric repeat binding factor 2, interacting protein -2.1518
TUG1 taurine up-regulated 1 (non-protein coding) -2.1505
CPT1B carnitine palmitoyltransferase 1B (muscle) -2.15018
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 -2.1404
AIDA axin interactor, dorsalization associated -2.13655
DEPDC5 DEP domain containing 5 -2.13625
NINL ninein-like -2.1286
KCTD13 potassium channel tetramerization domain containing 13 -2.12632
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase -2.1058
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G -2.0923
KIF16B kinesin family member 16B -2.0893
JAM3 junctional adhesion molecule 3 -2.0867
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 -2.085
B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 -2.06025
PARN poly(A)-specific ribonuclease -2.05905
WDR26 WD repeat domain 26 -2.04155
TTC17 tetratricopeptide repeat domain 17 -2.018
SLCO5A1 solute carrier organic anion transporter family, member 5A1 -2.0121