CRCGN017_MCF10A.TP53.M_24H:P23 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description benzo[k]fluoranthene 33.66 um perturbation at 24 h in MCF10A.TP53.M (Carcinogenome)
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Genes

110 genes differentially expressed following the CRCGN017_MCF10A.TP53.M_24H:P23 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
C2CD2 C2 calcium-dependent domain containing 2 5.2374
ADGRE5 adhesion G protein-coupled receptor E5 4.3957
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 3.72685
HBB hemoglobin, beta 3.64652
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 3.4877
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 3.28122
MSRA methionine sulfoxide reductase A 3.23185
ATP11B ATPase, class VI, type 11B 3.14855
CDK7 cyclin-dependent kinase 7 3.08815
MINDY1 MINDY lysine 48 deubiquitinase 1 2.94115
CAPN1 calpain 1, (mu/I) large subunit 2.74275
SLC75A1 solute carrier family 75 member 1 2.68565
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 2.6126
COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) 2.40595
CNRIP1 cannabinoid receptor interacting protein 1 2.39165
JAM3 junctional adhesion molecule 3 2.3764
COX5B cytochrome c oxidase subunit Vb 2.37517
PPIF peptidylprolyl isomerase F 2.37448
CGRRF1 cell growth regulator with ring finger domain 1 2.344
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) 2.34063
ZNF586 zinc finger protein 586 2.3365
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2.308
NXT2 nuclear transport factor 2-like export factor 2 2.3065
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 2.3055
HEBP2 heme binding protein 2 2.29155
SASH1 SAM and SH3 domain containing 1 2.24775
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 2.2358
PYGL phosphorylase, glycogen, liver 2.22915
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9 2.2182
ZNF134 zinc finger protein 134 2.21075
STAT4 signal transducer and activator of transcription 4 2.2047
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 2.19735
PPIC peptidylprolyl isomerase C (cyclophilin C) 2.17945
RHOA ras homolog family member A 2.1656
MPC2 mitochondrial pyruvate carrier 2 2.15465
RELB v-rel avian reticuloendotheliosis viral oncogene homolog B 2.15365
AKT1 v-akt murine thymoma viral oncogene homolog 1 2.1427
MKNK1 MAP kinase interacting serine/threonine kinase 1 2.113
ZDHHC6 zinc finger, DHHC-type containing 6 2.103
EXTL2 exostosin-like glycosyltransferase 2 2.0954
FAM124B family with sequence similarity 124B 2.09485
USP6 ubiquitin specific peptidase 6 2.09005
GTF2A2 general transcription factor IIA, 2, 12kDa 2.0851
TMEM126B transmembrane protein 126B 2.06755
CIAO2B cytosolic iron-sulfur assembly component 2B 2.06485
TRAPPC2L trafficking protein particle complex 2-like 2.0568
ZNF587 zinc finger protein 587 2.03145
MED24 mediator complex subunit 24 2.018
PELI2 pellino E3 ubiquitin protein ligase family member 2 2.01745
NSF N-ethylmaleimide-sensitive factor 2.0017
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 2.0014

decreased expression

Symbol Name Standardized Value
HAT1 histone acetyltransferase 1 -5.6506
SMNDC1 survival motor neuron domain containing 1 -5.54775
KRT14 keratin 14, type I -4.68065
RXYLT1 ribitol xylosyltransferase 1 -4.32938
KDM3A lysine (K)-specific demethylase 3A -4.2906
NSDHL NAD(P) dependent steroid dehydrogenase-like -4.20773
SLC35F2 solute carrier family 35, member F2 -4.18135
REEP5 receptor accessory protein 5 -4.14832
SCYL3 SCY1-like 3 (S. cerevisiae) -3.70125
CLTB clathrin, light chain B -3.68165
TRAPPC3 trafficking protein particle complex 3 -3.67335
AGO1 argonaute RISC catalytic component 1 -3.20515
OAT ornithine aminotransferase -3.03115
SF3A3 splicing factor 3a, subunit 3, 60kDa -2.89715
PCCB propionyl CoA carboxylase, beta polypeptide -2.84845
MAP7D1 MAP7 domain containing 1 -2.7792
IPP intracisternal A particle-promoted polypeptide -2.62995
SLC22A8 solute carrier family 22 (organic anion transporter), member 8 -2.5313
PRODH2 proline dehydrogenase (oxidase) 2 -2.47985
CDCA8 cell division cycle associated 8 -2.41995
MYBL2 v-myb avian myeloblastosis viral oncogene homolog-like 2 -2.40535
MEAF6 MYST/Esa1-associated factor 6 -2.39745
MSMO1 methylsterol monooxygenase 1 -2.39645
MSN moesin -2.3894
AMPD2 adenosine monophosphate deaminase 2 -2.36375
ITGAV integrin, alpha V -2.3463
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -2.34235
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -2.27775
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A -2.27085
EVI5 ecotropic viral integration site 5 -2.27067
IL4R interleukin 4 receptor -2.26745
BCAS3 breast carcinoma amplified sequence 3 -2.24975
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae) -2.24815
FBXO21 F-box protein 21 -2.24183
KIF1A kinesin family member 1A -2.24175
RNF44 ring finger protein 44 -2.2404
PCSK1N proprotein convertase subtilisin/kexin type 1 inhibitor -2.21065
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase -2.20685
AGBL5 ATP/GTP binding protein-like 5 -2.1994
TULP3 tubby like protein 3 -2.19397
DKC1 dyskeratosis congenita 1, dyskerin -2.14977
SAP30L SAP30-like -2.1362
PHC2 polyhomeotic homolog 2 (Drosophila) -2.11865
ZNF652 zinc finger protein 652 -2.109
FAIM Fas apoptotic inhibitory molecule -2.0941
SOX9 SRY (sex determining region Y)-box 9 -2.07615
NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 -2.07615
ADAT1 adenosine deaminase, tRNA-specific 1 -2.0662
CETN2 centrin, EF-hand protein, 2 -2.0591
MTFR1 mitochondrial fission regulator 1 -2.05295
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -2.04982
ZNF148 zinc finger protein 148 -2.04915
OXLD1 oxidoreductase-like domain containing 1 -2.04665
KRT23 keratin 23, type I -2.04195
F8A2 coagulation factor VIII-associated 2 -2.03515
UBQLN2 ubiquilin 2 -2.03405
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2) -2.02045
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28 -2.01255
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase -2.0017