CRCGN017_MCF10A.WT.HP_24H:C14 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description bexarotene 0.33 um perturbation at 24 h in MCF10A.WT.HP (Carcinogenome)
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Genes

70 genes differentially expressed following the CRCGN017_MCF10A.WT.HP_24H:C14 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
C2CD2 C2 calcium-dependent domain containing 2 5.26425
CANT1 calcium activated nucleotidase 1 4.4313
PLSCR1 phospholipid scramblase 1 4.3952
CXCR4 chemokine (C-X-C motif) receptor 4 4.32827
ALG8 ALG8, alpha-1,3-glucosyltransferase 4.2128
CLNS1A chloride channel, nucleotide-sensitive, 1A 4.05455
TCFL5 transcription factor-like 5 (basic helix-loop-helix) 4.0281
USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 3.63018
TCEA2 transcription elongation factor A (SII), 2 3.6282
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) 3.33325
FAIM Fas apoptotic inhibitory molecule 3.3274
HLA-DRA major histocompatibility complex, class II, DR alpha 3.24668
FGFR4 fibroblast growth factor receptor 4 3.23272
THAP12 THAP domain containing 12 3.1347
RSF1 remodeling and spacing factor 1 2.685
AAMDC adipogenesis associated, Mth938 domain containing 2.44875
ANO10 anoctamin 10 2.42455
OLFML2B olfactomedin-like 2B 2.3256
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 2.32253
TMEM186 transmembrane protein 186 2.2925
GAB2 GRB2-associated binding protein 2 2.26335
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit 2.25445
CCNE2 cyclin E2 2.21497
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 2.1748
NME1 NME/NM23 nucleoside diphosphate kinase 1 2.16445
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 2.078
FHL2 four and a half LIM domains 2 2.0778
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 2.0449
MAP3K5 mitogen-activated protein kinase kinase kinase 5 2.02782
CCDC90B coiled-coil domain containing 90B 2.02095
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 2.01305

decreased expression

Symbol Name Standardized Value
STXBP2 syntaxin binding protein 2 -4.7413
DSG2 desmoglein 2 -4.53215
PRPF4 pre-mRNA processing factor 4 -4.12477
GDF15 growth differentiation factor 15 -3.84835
MSMO1 methylsterol monooxygenase 1 -3.76535
KRT14 keratin 14, type I -3.4578
NR2F6 nuclear receptor subfamily 2, group F, member 6 -3.3353
SNCA synuclein, alpha (non A4 component of amyloid precursor) -3.2712
COPS7A COP9 signalosome subunit 7A -3.04725
ACAA1 acetyl-CoA acyltransferase 1 -2.93053
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -2.90917
ARID4B AT rich interactive domain 4B (RBP1-like) -2.90915
TRIB3 tribbles pseudokinase 3 -2.86365
CREB1 cAMP responsive element binding protein 1 -2.7828
BPHL biphenyl hydrolase-like (serine hydrolase) -2.6771
ZNF79 zinc finger protein 79 -2.49907
RAI14 retinoic acid induced 14 -2.47865
S100A1 S100 calcium binding protein A1 -2.4233
NGRN neugrin, neurite outgrowth associated -2.4189
NOCT nocturnin -2.38805
SLC31A1 solute carrier family 31 (copper transporter), member 1 -2.23605
PGPEP1 pyroglutamyl-peptidase I -2.235
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -2.21285
BAD BCL2-associated agonist of cell death -2.20823
JUP junction plakoglobin -2.20655
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -2.18665
CBX8 chromobox homolog 8 -2.1706
DNM2 dynamin 2 -2.1509
TENM1 teneurin transmembrane protein 1 -2.1384
HECTD3 HECT domain containing E3 ubiquitin protein ligase 3 -2.1123
NVL nuclear VCP-like -2.04625
DZANK1 double zinc ribbon and ankyrin repeat domains 1 -2.04185
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group) -2.041
MAVS mitochondrial antiviral signaling protein -2.0375
ALAS2 5'-aminolevulinate synthase 2 -2.0279
LPCAT3 lysophosphatidylcholine acyltransferase 3 -2.0165
EYA4 EYA transcriptional coactivator and phosphatase 4 -2.0104
GABARAPL1 GABA(A) receptor-associated protein like 1 -2.00547
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 -2.00415