CRCGN017_MCF10A.WT.HP_24H:D07 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description tretinoin 10.0 um perturbation at 24 h in MCF10A.WT.HP (Carcinogenome)
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Genes

56 genes differentially expressed following the CRCGN017_MCF10A.WT.HP_24H:D07 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
HOXA5 homeobox A5 7.58585
HBA1 hemoglobin, alpha 1 5.09888
HBB hemoglobin, beta 4.74013
HMOX1 heme oxygenase 1 4.5675
PLS1 plastin 1 4.5578
TBX2 T-box 2 4.53073
AMDHD2 amidohydrolase domain containing 2 4.3685
SMAD3 SMAD family member 3 3.65642
CLNS1A chloride channel, nucleotide-sensitive, 1A 3.46815
FHL2 four and a half LIM domains 2 3.3989
PKN1 protein kinase N1 3.03982
BAG3 BCL2-associated athanogene 3 2.9869
TCEA2 transcription elongation factor A (SII), 2 2.9539
ACAA1 acetyl-CoA acyltransferase 1 2.89198
EFHD2 EF-hand domain family, member D2 2.84055
RSF1 remodeling and spacing factor 1 2.7998
WIF1 WNT inhibitory factor 1 2.7514
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit 2.6588
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) 2.55385
TBPL1 TBP-like 1 2.4531
NRIP1 nuclear receptor interacting protein 1 2.26677
TPD52L2 tumor protein D52-like 2 2.23155
SLC35F2 solute carrier family 35, member F2 2.19755
ADGRE5 adhesion G protein-coupled receptor E5 2.1724
DSG2 desmoglein 2 2.13225
GNA15 guanine nucleotide binding protein (G protein), alpha 15 (Gq class) 2.0938
AKAP10 A kinase (PRKA) anchor protein 10 2.09125
THAP12 THAP domain containing 12 2.08775
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2.085
HOXA4 homeobox A4 2.0597
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 2.04995
CDC7 cell division cycle 7 2.0146
STX1A syntaxin 1A (brain) 2.01215
KCTD3 potassium channel tetramerization domain containing 3 2.0084

decreased expression

Symbol Name Standardized Value
KRT14 keratin 14, type I -5.5079
CYCS cytochrome c, somatic -5.26145
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 -5.1042
CD58 CD58 molecule -4.9025
MSMO1 methylsterol monooxygenase 1 -4.03885
S100A4 S100 calcium binding protein A4 -2.87875
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -2.8072
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase -2.6259
RBM34 RNA binding motif protein 34 -2.4774
FKBP9 FK506 binding protein 9, 63 kDa -2.4424
RALGDS ral guanine nucleotide dissociation stimulator -2.40543
GSDME gasdermin E -2.294
SLC26A2 solute carrier family 26 (anion exchanger), member 2 -2.27435
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa -2.20248
GUK1 guanylate kinase 1 -2.1878
NISCH nischarin -2.16565
STUB1 STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase -2.13385
PFN1 profilin 1 -2.12935
GGPS1 geranylgeranyl diphosphate synthase 1 -2.0894
PRODH proline dehydrogenase (oxidase) 1 -2.0715
ADRB2 adrenoceptor beta 2, surface -2.0667
RGS2 regulator of G-protein signaling 2 -2.0044