Dataset | MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations |
Category | transcriptomics |
Type | gene perturbation |
Description | gene perturbation identified as [gene symbol]_[perturbation or condition] (Molecular Signatures Database) |
External Link | http://www.broadinstitute.org/gsea/msigdb/cards/CRX_DN.V1_UP |
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269 genes differentially expressed following the CRX_DN.V1 gene perturbation from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
Symbol | Name |
---|---|
ABCA4 | ATP-binding cassette, sub-family A (ABC1), member 4 |
AGR2 | anterior gradient 2 |
ALPK2 | alpha-kinase 2 |
ALPL | alkaline phosphatase, liver/bone/kidney |
ANKRD33 | ankyrin repeat domain 33 |
AQP1 | aquaporin 1 (Colton blood group) |
ARG2 | arginase 2 |
ARHGAP10 | Rho GTPase activating protein 10 |
B4GALT1 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 |
BATF2 | basic leucine zipper transcription factor, ATF-like 2 |
BCAR3 | breast cancer anti-estrogen resistance 3 |
BMP15 | bone morphogenetic protein 15 |
BST1 | bone marrow stromal cell antigen 1 |
BUB1B | BUB1 mitotic checkpoint serine/threonine kinase B |
C14ORF37 | chromosome 14 open reading frame 37 |
C16ORF74 | chromosome 16 open reading frame 74 |
CABP4 | calcium binding protein 4 |
CCDC107 | coiled-coil domain containing 107 |
CCDC64 | coiled-coil domain containing 64 |
CDR2 | cerebellar degeneration-related protein 2, 62kDa |
CKMT1A | creatine kinase, mitochondrial 1A |
CLDN7 | claudin 7 |
COL19A1 | collagen, type XIX, alpha 1 |
CSGALNACT2 | chondroitin sulfate N-acetylgalactosaminyltransferase 2 |
DDHD1 | DDHD domain containing 1 |
DHH | desert hedgehog |
DOCK8 | dedicator of cytokinesis 8 |
DOHH | deoxyhypusine hydroxylase/monooxygenase |
DPF3 | D4, zinc and double PHD fingers, family 3 |
DUSP14 | dual specificity phosphatase 14 |
ESRRB | estrogen-related receptor beta |
FAAH | fatty acid amide hydrolase |
FAIM | Fas apoptotic inhibitory molecule |
FAM107B | family with sequence similarity 107, member B |
FAM161A | family with sequence similarity 161, member A |
GAS7 | growth arrest-specific 7 |
GCKR | glucokinase (hexokinase 4) regulator |
GNAT1 | guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 |
GPSM2 | G-protein signaling modulator 2 |
GPSM3 | G-protein signaling modulator 3 |
GRK1 | G protein-coupled receptor kinase 1 |
GRTP1 | growth hormone regulated TBC protein 1 |
GUCA1B | guanylate cyclase activator 1B (retina) |
GZMM | granzyme M (lymphocyte met-ase 1) |
HCLS1 | hematopoietic cell-specific Lyn substrate 1 |
HSPA1A | heat shock 70kDa protein 1A |
HSPA1B | heat shock 70kDa protein 1B |
IER3 | immediate early response 3 |
INSL5 | insulin-like 5 |
JAG1 | jagged 1 |
KCNE2 | potassium channel, voltage gated subfamily E regulatory beta subunit 2 |
KCNJ14 | potassium channel, inwardly rectifying subfamily J, member 14 |
KLKB1 | kallikrein B, plasma (Fletcher factor) 1 |
KRT18 | keratin 18, type I |
LLGL2 | lethal giant larvae homolog 2 (Drosophila) |
MC1R | melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) |
MDM1 | Mdm1 nuclear protein homolog (mouse) |
MEF2C | myocyte enhancer factor 2C |
MMP23B | matrix metallopeptidase 23B |
MYLK | myosin light chain kinase |
MYRF | myelin regulatory factor |
NAT1 | N-acetyltransferase 1 (arylamine N-acetyltransferase) |
NRM | nurim (nuclear envelope membrane protein) |
NXNL1 | nucleoredoxin-like 1 |
NXNL2 | nucleoredoxin-like 2 |
ONECUT1 | one cut homeobox 1 |
OPN1MW | opsin 1 (cone pigments), medium-wave-sensitive |
OPN1SW | opsin 1 (cone pigments), short-wave-sensitive |
OSGEP | O-sialoglycoprotein endopeptidase |
PACRG | PARK2 co-regulated |
PAQR4 | progestin and adipoQ receptor family member IV |
PDE6A | phosphodiesterase 6A, cGMP-specific, rod, alpha |
PDE6H | phosphodiesterase 6H, cGMP-specific, cone, gamma |
PDIA5 | protein disulfide isomerase family A, member 5 |
PFKFB2 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 |
PLA2R1 | phospholipase A2 receptor 1, 180kDa |
PLEKHF2 | pleckstrin homology domain containing, family F (with FYVE domain) member 2 |
POLG2 | polymerase (DNA directed), gamma 2, accessory subunit |
PPAP2C | phosphatidic acid phosphatase type 2C |
PPP1R42 | protein phosphatase 1, regulatory subunit 42 |
PPP3CC | protein phosphatase 3, catalytic subunit, gamma isozyme |
PRPH2 | peripherin 2 (retinal degeneration, slow) |
PTPN21 | protein tyrosine phosphatase, non-receptor type 21 |
RABGEF1 | RAB guanine nucleotide exchange factor (GEF) 1 |
RAD51 | RAD51 recombinase |
RANGRF | RAN guanine nucleotide release factor |
RCVRN | recoverin |
RDH12 | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) |
RDH5 | retinol dehydrogenase 5 (11-cis/9-cis) |
REEP6 | receptor accessory protein 6 |
RGR | retinal G protein coupled receptor |
RHPN1 | rhophilin, Rho GTPase binding protein 1 |
RNF123 | ring finger protein 123 |
RNF207 | ring finger protein 207 |
RPE65 | retinal pigment epithelium-specific protein 65kDa |
RPGRIP1 | retinitis pigmentosa GTPase regulator interacting protein 1 |
RS1 | retinoschisin 1 |
RTBDN | retbindin |
SELENBP1 | selenium binding protein 1 |
SERINC4 | serine incorporator 4 |
SGCG | sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) |
SH2D1A | SH2 domain containing 1A |
SH3YL1 | SH3 and SYLF domain containing 1 |
SLC17A1 | solute carrier family 17 (organic anion transporter), member 1 |
SLC24A1 | solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 |
SLC25A25 | solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 |
SNTA1 | syntrophin, alpha 1 |
SNTB2 | syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) |
SNTG2 | syntrophin, gamma 2 |
SP6 | Sp6 transcription factor |
ST8SIA1 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 |
STK17B | serine/threonine kinase 17b |
STK35 | serine/threonine kinase 35 |
STRA6 | stimulated by retinoic acid 6 |
SUV39H2 | suppressor of variegation 3-9 homolog 2 (Drosophila) |
SYNPO2 | synaptopodin 2 |
TAOK3 | TAO kinase 3 |
TCP11 | t-complex 11, testis-specific |
TMEM218 | transmembrane protein 218 |
TMEM229B | transmembrane protein 229B |
TMEM27 | transmembrane protein 27 |
TMEM35 | transmembrane protein 35 |
TMLHE | trimethyllysine hydroxylase, epsilon |
TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 |
TRAFD1 | TRAF-type zinc finger domain containing 1 |
TTC39C | tetratricopeptide repeat domain 39C |
UBTD1 | ubiquitin domain containing 1 |
UBXN11 | UBX domain protein 11 |
VTN | vitronectin |
WDR31 | WD repeat domain 31 |
WDR78 | WD repeat domain 78 |
WISP1 | WNT1 inducible signaling pathway protein 1 |
XIST | X inactive specific transcript (non-protein coding) |
ZDHHC12 | zinc finger, DHHC-type containing 12 |
ZFP57 | ZFP57 zinc finger protein |
Symbol | Name |
---|---|
ACBD6 | acyl-CoA binding domain containing 6 |
ACSS1 | acyl-CoA synthetase short-chain family member 1 |
ANXA2 | annexin A2 |
APOBEC2 | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 |
ARHGEF28 | Rho guanine nucleotide exchange factor (GEF) 28 |
ATP8B2 | ATPase, aminophospholipid transporter, class I, type 8B, member 2 |
B3GNT2 | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
BACH2 | BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
BCL3 | B-cell CLL/lymphoma 3 |
C1QC | complement component 1, q subcomponent, C chain |
C1QTNF6 | C1q and tumor necrosis factor related protein 6 |
CADPS2 | Ca++-dependent secretion activator 2 |
CALCA | calcitonin-related polypeptide alpha |
CAMK2B | calcium/calmodulin-dependent protein kinase II beta |
CAPN12 | calpain 12 |
CCKBR | cholecystokinin B receptor |
CD44 | CD44 molecule (Indian blood group) |
CDH20 | cadherin 20, type 2 |
CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha |
CEBPB | CCAAT/enhancer binding protein (C/EBP), beta |
CEBPD | CCAAT/enhancer binding protein (C/EBP), delta |
CHAC1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 |
CHRNA3 | cholinergic receptor, nicotinic, alpha 3 (neuronal) |
CHRNB4 | cholinergic receptor, nicotinic, beta 4 (neuronal) |
CLRN3 | clarin 3 |
COL16A1 | collagen, type XVI, alpha 1 |
COL4A2 | collagen, type IV, alpha 2 |
CRYBG3 | beta-gamma crystallin domain containing 3 |
CSN3 | casein kappa |
CTNNAL1 | catenin (cadherin-associated protein), alpha-like 1 |
CXCL13 | chemokine (C-X-C motif) ligand 13 |
DCAF4 | DDB1 and CUL4 associated factor 4 |
DDX3Y | DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
DHX32 | DEAH (Asp-Glu-Ala-His) box polypeptide 32 |
DUSP16 | dual specificity phosphatase 16 |
EFNA1 | ephrin-A1 |
EGR1 | early growth response 1 |
EYA1 | EYA transcriptional coactivator and phosphatase 1 |
FABP5 | fatty acid binding protein 5 (psoriasis-associated) |
FABP7 | fatty acid binding protein 7, brain |
FKBP5 | FK506 binding protein 5 |
FMN1 | formin 1 |
FMO3 | flavin containing monooxygenase 3 |
FOXD1 | forkhead box D1 |
FRMD6 | FERM domain containing 6 |
FUT4 | fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) |
GDAP1L1 | ganglioside induced differentiation associated protein 1-like 1 |
GFAP | glial fibrillary acidic protein |
GHRH | growth hormone releasing hormone |
GLIPR2 | GLI pathogenesis-related 2 |
GLYCAM1 | glycosylation dependent cell adhesion molecule 1 (pseudogene) |
GNG11 | guanine nucleotide binding protein (G protein), gamma 11 |
GULOP | gulonolactone (L-) oxidase, pseudogene |
H6PD | hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) |
HNF1A | HNF1 homeobox A |
HSD17B2 | hydroxysteroid (17-beta) dehydrogenase 2 |
INHBB | inhibin, beta B |
INSM1 | insulinoma-associated 1 |
INSM2 | insulinoma-associated 2 |
IRF5 | interferon regulatory factor 5 |
JAM3 | junctional adhesion molecule 3 |
JUNB | jun B proto-oncogene |
KDELR3 | KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 |
KLF10 | Kruppel-like factor 10 |
KSR1 | kinase suppressor of ras 1 |
LAD1 | ladinin 1 |
LDB1 | LIM domain binding 1 |
LECT1 | leukocyte cell derived chemotaxin 1 |
LIN28A | lin-28 homolog A (C. elegans) |
LIX1 | Lix1 homolog (chicken) |
LRRC4 | leucine rich repeat containing 4 |
LXN | latexin |
MAP3K8 | mitogen-activated protein kinase kinase kinase 8 |
MFSD4 | major facilitator superfamily domain containing 4 |
MPP6 | membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) |
MYOCD | myocardin |
MYOZ1 | myozenin 1 |
NAB1 | NGFI-A binding protein 1 (EGR1 binding protein 1) |
NAB2 | NGFI-A binding protein 2 (EGR1 binding protein 2) |
NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
NUPR1 | nuclear protein, transcriptional regulator, 1 |
OSMR | oncostatin M receptor |
PCOLCE | procollagen C-endopeptidase enhancer |
PCSK2 | proprotein convertase subtilisin/kexin type 2 |
PHOSPHO1 | phosphatase, orphan 1 |
PHOX2B | paired-like homeobox 2b |
PLAT | plasminogen activator, tissue |
PLEC | plectin |
PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 |
PPP1R14A | protein phosphatase 1, regulatory (inhibitor) subunit 14A |
PRDM1 | PR domain containing 1, with ZNF domain |
PTER | phosphotriesterase related |
PYCR1 | pyrroline-5-carboxylate reductase 1 |
RAI14 | retinoic acid induced 14 |
RBP4 | retinol binding protein 4, plasma |
RGL3 | ral guanine nucleotide dissociation stimulator-like 3 |
RNASE4 | ribonuclease, RNase A family, 4 |
RXRG | retinoid X receptor, gamma |
S100A16 | S100 calcium binding protein A16 |
S100A6 | S100 calcium binding protein A6 |
SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
SEMA5B | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B |
SERPINA3 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 |
SERPING1 | serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 |
SH3BP4 | SH3-domain binding protein 4 |
SKAP2 | src kinase associated phosphoprotein 2 |
SLC22A7 | solute carrier family 22 (organic anion transporter), member 7 |
SLC26A4 | solute carrier family 26 (anion exchanger), member 4 |
SMOC2 | SPARC related modular calcium binding 2 |
SMPDL3A | sphingomyelin phosphodiesterase, acid-like 3A |
SOCS3 | suppressor of cytokine signaling 3 |
SPG21 | spastic paraplegia 21 (autosomal recessive, Mast syndrome) |
SPSB2 | splA/ryanodine receptor domain and SOCS box containing 2 |
ST3GAL3 | ST3 beta-galactoside alpha-2,3-sialyltransferase 3 |
STEAP4 | STEAP family member 4 |
TAGLN2 | transgelin 2 |
TCTE3 | t-complex-associated-testis-expressed 3 |
TECTA | tectorin alpha |
TGM2 | transglutaminase 2 |
TIMP1 | TIMP metallopeptidase inhibitor 1 |
TLE1 | transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) |
TMBIM1 | transmembrane BAX inhibitor motif containing 1 |
TMEM176A | transmembrane protein 176A |
TMOD1 | tropomodulin 1 |
TNFRSF12A | tumor necrosis factor receptor superfamily, member 12A |
TNFRSF13B | tumor necrosis factor receptor superfamily, member 13B |
TNNC2 | troponin C type 2 (fast) |
TRIM13 | tripartite motif containing 13 |
TRPC3 | transient receptor potential cation channel, subfamily C, member 3 |
TUBB6 | tubulin, beta 6 class V |
WWC1 | WW and C2 domain containing 1 |
ZDHHC14 | zinc finger, DHHC-type containing 14 |
ZNF474 | zinc finger protein 474 |