CTCF Gene Set

Dataset Pathway Commons Protein-Protein Interactions
Category physical interactions
Type interacting protein
Description CCCTC-binding factor (zinc finger protein)|This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. Depending upon the context of the site, the protein can bind a histone acetyltransferase (HAT)-containing complex and function as a transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as a transcriptional repressor. If the protein is bound to a transcriptional insulator element, it can block communication between enhancers and upstream promoters, thereby regulating imprinted expression. Mutations in this gene have been associated with invasive breast cancers, prostate cancers, and Wilms' tumors. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2010] (NCBI Entrez Gene Database, 10664)
External Link http://www.ncbi.nlm.nih.gov/gene/10664
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Genes

543 interacting proteins for CTCF from the Pathway Commons Protein-Protein Interactions dataset.

Symbol Name
ADD3 adducin 3 (gamma)
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
AKAP1 A kinase (PRKA) anchor protein 1
AKAP8 A kinase (PRKA) anchor protein 8
ALYREF Aly/REF export factor
ANXA2 annexin A2
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APP amyloid beta (A4) precursor protein
ARID1A AT rich interactive domain 1A (SWI-like)
ARID2 AT rich interactive domain 2 (ARID, RFX-like)
ASF1A anti-silencing function 1A histone chaperone
ASPH aspartate beta-hydroxylase
ATAD3A ATPase family, AAA domain containing 3A
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ATP5D ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
ATP5H ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d
BCAS2 breast carcinoma amplified sequence 2
BCLAF1 BCL2-associated transcription factor 1
BMI1 BMI1 proto-oncogene, polycomb ring finger
BMS1 BMS1 ribosome biogenesis factor
BRCA1 breast cancer 1, early onset
BRD7 bromodomain containing 7
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
BYSL bystin-like
C14ORF166 chromosome 14 open reading frame 166
C19ORF53 chromosome 19 open reading frame 53
C1QBP complement component 1, q subcomponent binding protein
C4ORF27 chromosome 4 open reading frame 27
CABIN1 calcineurin binding protein 1
CAND1 cullin-associated and neddylation-dissociated 1
CAPRIN1 cell cycle associated protein 1
CCDC59 coiled-coil domain containing 59
CCDC86 coiled-coil domain containing 86
CD3EAP CD3e molecule, epsilon associated protein
CDC42 cell division cycle 42
CDC5L cell division cycle 5-like
CDK19 cyclin-dependent kinase 19
CGGBP1 CGG triplet repeat binding protein 1
CHD1L chromodomain helicase DNA binding protein 1-like
CHD7 chromodomain helicase DNA binding protein 7
CHD8 chromodomain helicase DNA binding protein 8
CHRAC1 chromatin accessibility complex 1
CIRBP cold inducible RNA binding protein
CKAP4 cytoskeleton-associated protein 4
CKAP5 cytoskeleton associated protein 5
CLOCK clock circadian regulator
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CPT1A carnitine palmitoyltransferase 1A (liver)
CRCP CGRP receptor component
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
CTBP1 C-terminal binding protein 1
DAP3 death associated protein 3
DARS aspartyl-tRNA synthetase
DAZAP1 DAZ associated protein 1
DDB1 damage-specific DNA binding protein 1, 127kDa
DDB2 damage-specific DNA binding protein 2, 48kDa
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic)
DDRGK1 DDRGK domain containing 1
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21
DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DDX54 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DHCR24 24-dehydrocholesterol reductase
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DKC1 dyskeratosis congenita 1, dyskerin
DNAJC13 DnaJ (Hsp40) homolog, subfamily C, member 13
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1
DPY30 dpy-30 homolog (C. elegans)
DUS3L dihydrouridine synthase 3-like (S. cerevisiae)
EBNA1BP2 EBNA1 binding protein 2
EED embryonic ectoderm development
EFTUD2 elongation factor Tu GTP binding domain containing 2
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
EIF3A eukaryotic translation initiation factor 3, subunit A
EIF3C eukaryotic translation initiation factor 3, subunit C
EIF3E eukaryotic translation initiation factor 3, subunit E
ELAVL1 ELAV like RNA binding protein 1
ELMSAN1 ELM2 and Myb/SANT-like domain containing 1
EMG1 EMG1 N1-specific pseudouridine methyltransferase
EPB41L1 erythrocyte membrane protein band 4.1-like 1
EPB41L2 erythrocyte membrane protein band 4.1-like 2
EPB41L5 erythrocyte membrane protein band 4.1 like 5
EPRS glutamyl-prolyl-tRNA synthetase
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
ESRRA estrogen-related receptor alpha
ESYT1 extended synaptotagmin-like protein 1
ESYT2 extended synaptotagmin-like protein 2
EWSR1 EWS RNA-binding protein 1
EXOSC1 exosome component 1
EXOSC10 exosome component 10
EXOSC2 exosome component 2
EXOSC4 exosome component 4
EXOSC5 exosome component 5
EXOSC6 exosome component 6
EXOSC7 exosome component 7
EXOSC9 exosome component 9
FAM120A family with sequence similarity 120A
FAR1 fatty acyl CoA reductase 1
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
FBL fibrillarin
FGFBP1 fibroblast growth factor binding protein 1
FIP1L1 factor interacting with PAPOLA and CPSF1
FMR1 fragile X mental retardation 1
FUBP1 far upstream element (FUSE) binding protein 1
FUS FUS RNA binding protein
FXR1 fragile X mental retardation, autosomal homolog 1
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
G3BP2 GTPase activating protein (SH3 domain) binding protein 2
GLTSCR2 glioma tumor suppressor candidate region gene 2
GLUD1 glutamate dehydrogenase 1
GNL2 guanine nucleotide binding protein-like 2 (nucleolar)
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GPATCH4 G patch domain containing 4
GRWD1 glutamate-rich WD repeat containing 1
GTF2I general transcription factor IIi
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa
GTPBP10 GTP-binding protein 10 (putative)
H1F0 H1 histone family, member 0
H1FX H1 histone family, member X
H2AFZ H2A histone family, member Z
HACD3 3-hydroxyacyl-CoA dehydratase 3
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HDAC1 histone deacetylase 1
HDAC2 histone deacetylase 2
HDLBP high density lipoprotein binding protein
HEXIM1 hexamethylene bis-acetamide inducible 1
HIST1H1B histone cluster 1, H1b
HIST1H1C histone cluster 1, H1c
HIST1H1E histone cluster 1, H1e
HIST1H2BA histone cluster 1, H2ba
HIST1H4F histone cluster 1, H4f
HIST2H2AA4 histone cluster 2, H2aa4
HIST2H2AC histone cluster 2, H2ac
HMGB1 high mobility group box 1
HMGB2 high mobility group box 2
HMGB3 high mobility group box 3
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like
HNRNPF heterogeneous nuclear ribonucleoprotein F
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HNRNPK heterogeneous nuclear ribonucleoprotein K
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPM heterogeneous nuclear ribonucleoprotein M
HNRNPR heterogeneous nuclear ribonucleoprotein R
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2
HP1BP3 heterochromatin protein 1, binding protein 3
HPSE heparanase
HSPA1B heat shock 70kDa protein 1B
HSPA8 heat shock 70kDa protein 8
HSPA9 heat shock 70kDa protein 9 (mortalin)
HSPB9 heat shock protein, alpha-crystallin-related, B9
IARS isoleucyl-tRNA synthetase
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3
ILF2 interleukin enhancer binding factor 2
ILF3 interleukin enhancer binding factor 3, 90kDa
INO80E INO80 complex subunit E
IQGAP1 IQ motif containing GTPase activating protein 1
KANSL1 KAT8 regulatory NSL complex subunit 1
KARS lysyl-tRNA synthetase
KCTD12 potassium channel tetramerization domain containing 12
KHSRP KH-type splicing regulatory protein
KIAA0020 KIAA0020
KIFC1 kinesin family member C1
KLF16 Kruppel-like factor 16
KPNA1 karyopherin alpha 1 (importin alpha 5)
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
KPNA3 karyopherin alpha 3 (importin alpha 4)
KPNA4 karyopherin alpha 4 (importin alpha 3)
KPNB1 karyopherin (importin) beta 1
LAMA5 laminin, alpha 5
LARP1 La ribonucleoprotein domain family, member 1
LARP4 La ribonucleoprotein domain family, member 4
LARS leucyl-tRNA synthetase
LIG3 ligase III, DNA, ATP-dependent
LIN28B lin-28 homolog B (C. elegans)
LLPH LLP homolog, long-term synaptic facilitation (Aplysia)
LMNA lamin A/C
LRPPRC leucine-rich pentatricopeptide repeat containing
LRRC59 leucine rich repeat containing 59
LYAR Ly1 antibody reactive
LYZ lysozyme
MACF1 microtubule-actin crosslinking factor 1
MAGT1 magnesium transporter 1
MARK2 MAP/microtubule affinity-regulating kinase 2
MARS methionyl-tRNA synthetase
MATR3 matrin 3
MBD2 methyl-CpG binding domain protein 2
MCM3 minichromosome maintenance complex component 3
MCM5 minichromosome maintenance complex component 5
MDC1 mediator of DNA-damage checkpoint 1
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
METTL17 methyltransferase like 17
MICU2 mitochondrial calcium uptake 2
MOGS mannosyl-oligosaccharide glucosidase
MPG N-methylpurine-DNA glycosylase
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MRPL12 mitochondrial ribosomal protein L12
MRPL15 mitochondrial ribosomal protein L15
MRPL18 mitochondrial ribosomal protein L18
MRPL40 mitochondrial ribosomal protein L40
MRPL41 mitochondrial ribosomal protein L41
MRPS12 mitochondrial ribosomal protein S12
MRPS14 mitochondrial ribosomal protein S14
MRPS15 mitochondrial ribosomal protein S15
MRPS17 mitochondrial ribosomal protein S17
MRPS18B mitochondrial ribosomal protein S18B
MRPS23 mitochondrial ribosomal protein S23
MRPS26 mitochondrial ribosomal protein S26
MRPS27 mitochondrial ribosomal protein S27
MRPS28 mitochondrial ribosomal protein S28
MRPS31 mitochondrial ribosomal protein S31
MRPS7 mitochondrial ribosomal protein S7
MRPS9 mitochondrial ribosomal protein S9
MSH2 mutS homolog 2
MSH3 mutS homolog 3
MSH6 mutS homolog 6
MTA3 metastasis associated 1 family, member 3
MTDH metadherin
MYBBP1A MYB binding protein (P160) 1a
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit
NAP1L1 nucleosome assembly protein 1-like 1
NARS asparaginyl-tRNA synthetase
NAT10 N-acetyltransferase 10 (GCN5-related)
NAV3 neuron navigator 3
NCAPD3 non-SMC condensin II complex, subunit D3
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NFIA nuclear factor I/A
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NGEF neuronal guanine nucleotide exchange factor
NIPSNAP1 nipsnap homolog 1 (C. elegans)
NOA1 nitric oxide associated 1
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae)
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOC4L nucleolar complex associated 4 homolog (S. cerevisiae)
NOM1 nucleolar protein with MIF4G domain 1
NONO non-POU domain containing, octamer-binding
NOP14 NOP14 nucleolar protein
NOP16 NOP16 nucleolar protein
NOP2 NOP2 nucleolar protein
NOP56 NOP56 ribonucleoprotein
NOP9 NOP9 nucleolar protein
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR2F1 nuclear receptor subfamily 2, group F, member 1
NR2F2 nuclear receptor subfamily 2, group F, member 2
NR2F6 nuclear receptor subfamily 2, group F, member 6
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NUCLEOLIN nucleolin multifunctional protein
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
NXF1 nuclear RNA export factor 1
PABPC1 poly(A) binding protein, cytoplasmic 1
PABPN1 poly(A) binding protein, nuclear 1
PARP1 poly (ADP-ribose) polymerase 1
PARP2 poly (ADP-ribose) polymerase 2
PCBP1 poly(rC) binding protein 1
PCNA proliferating cell nuclear antigen
PEG10 paternally expressed 10
PES1 pescadillo ribosomal biogenesis factor 1
PKNOX1 PBX/knotted 1 homeobox 1
PKP3 plakophilin 3
PLCD3 phospholipase C, delta 3
PLK1 polo-like kinase 1
PLRG1 pleiotropic regulator 1
PNKP polynucleotide kinase 3'-phosphatase
PNO1 partner of NOB1 homolog (S. cerevisiae)
PNPLA6 patatin-like phospholipase domain containing 6
POLB polymerase (DNA directed), beta
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit
POLG polymerase (DNA directed), gamma
POLG2 polymerase (DNA directed), gamma 2, accessory subunit
POLR1A polymerase (RNA) I polypeptide A, 194kDa
POLR1C polymerase (RNA) I polypeptide C, 30kDa
POLR1D polymerase (RNA) I polypeptide D, 16kDa
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
POLR2H polymerase (RNA) II (DNA directed) polypeptide H
POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
POLR3B polymerase (RNA) III (DNA directed) polypeptide B
POLR3C polymerase (RNA) III (DNA directed) polypeptide C (62kD)
POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
POLR3F polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
POLRMT polymerase (RNA) mitochondrial (DNA directed)
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
POU5F1 POU class 5 homeobox 1
PPP1R10 protein phosphatase 1, regulatory subunit 10
PPP6R3 protein phosphatase 6, regulatory subunit 3
PRDM16 PR domain containing 16
PRKCDBP protein kinase C, delta binding protein
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRMT1 protein arginine methyltransferase 1
PRPF19 pre-mRNA processing factor 19
PRPF3 pre-mRNA processing factor 3
PRPF4 pre-mRNA processing factor 4
PRPF6 pre-mRNA processing factor 6
PTBP1 polypyrimidine tract binding protein 1
PTCD3 pentatricopeptide repeat domain 3
PTRF polymerase I and transcript release factor
PUF60 poly-U binding splicing factor 60KDa
PUS1 pseudouridylate synthase 1
QARS glutaminyl-tRNA synthetase
RAD21 RAD21 homolog (S. pombe)
RAD50 RAD50 homolog (S. cerevisiae)
RALA v-ral simian leukemia viral oncogene homolog A (ras related)
RAN RAN, member RAS oncogene family
RARS arginyl-tRNA synthetase
RBM14 RNA binding motif protein 14
RBM15 RNA binding motif protein 15
RBM19 RNA binding motif protein 19
RBM26 RNA binding motif protein 26
RBM3 RNA binding motif (RNP1, RRM) protein 3
RBM39 RNA binding motif protein 39
RBM4 RNA binding motif protein 4
RBM42 RNA binding motif protein 42
RBMX RNA binding motif protein, X-linked
RECQL RecQ helicase-like
RFC1 replication factor C (activator 1) 1, 145kDa
RFC2 replication factor C (activator 1) 2, 40kDa
RFC3 replication factor C (activator 1) 3, 38kDa
RFC4 replication factor C (activator 1) 4, 37kDa
RFC5 replication factor C (activator 1) 5, 36.5kDa
RPA1 replication protein A1, 70kDa
RPA2 replication protein A2, 32kDa
RPA3 replication protein A3, 14kDa
RPL10 ribosomal protein L10
RPL15 ribosomal protein L15
RPL17 ribosomal protein L17
RPL18 ribosomal protein L18
RPL19 ribosomal protein L19
RPL21 ribosomal protein L21
RPL22 ribosomal protein L22
RPL23 ribosomal protein L23
RPL23A ribosomal protein L23a
RPL24 ribosomal protein L24
RPL26 ribosomal protein L26
RPL26L1 ribosomal protein L26-like 1
RPL27 ribosomal protein L27
RPL27A ribosomal protein L27a
RPL3 ribosomal protein L3
RPL31 ribosomal protein L31
RPL32 ribosomal protein L32
RPL35 ribosomal protein L35
RPL36 ribosomal protein L36
RPL36A ribosomal protein L36a
RPL38 ribosomal protein L38
RPL4 ribosomal protein L4
RPL5 ribosomal protein L5
RPL6 ribosomal protein L6
RPL7A ribosomal protein L7a
RPL8 ribosomal protein L8
RPLP2 ribosomal protein, large, P2
RPN1 ribophorin I
RPS10 ribosomal protein S10
RPS11 ribosomal protein S11
RPS12 ribosomal protein S12
RPS13 ribosomal protein S13
RPS14 ribosomal protein S14
RPS15 ribosomal protein S15
RPS15A ribosomal protein S15a
RPS17 ribosomal protein S17
RPS18 ribosomal protein S18
RPS2 ribosomal protein S2
RPS23 ribosomal protein S23
RPS24 ribosomal protein S24
RPS25 ribosomal protein S25
RPS26 ribosomal protein S26
RPS27 ribosomal protein S27
RPS28 ribosomal protein S28
RPS29 ribosomal protein S29
RPS3 ribosomal protein S3
RPS3A ribosomal protein S3A
RPS4X ribosomal protein S4, X-linked
RPS6 ribosomal protein S6
RPS7 ribosomal protein S7
RPS8 ribosomal protein S8
RPS9 ribosomal protein S9
RPSA ribosomal protein SA
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae)
RSL1D1 ribosomal L1 domain containing 1
RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase
RXRA retinoid X receptor, alpha
S100A8 S100 calcium binding protein A8
SAP130 Sin3A-associated protein, 130kDa
SART1 squamous cell carcinoma antigen recognized by T cells
SDAD1 SDA1 domain containing 1
SERBP1 SERPINE1 mRNA binding protein 1
SET SET nuclear proto-oncogene
SF3B1 splicing factor 3b, subunit 1, 155kDa
SF3B2 splicing factor 3b, subunit 2, 145kDa
SF3B3 splicing factor 3b, subunit 3, 130kDa
SFPQ splicing factor proline/glutamine-rich
SGPL1 sphingosine-1-phosphate lyase 1
SIN3A SIN3 transcription regulator family member A
SIN3B SIN3 transcription regulator family member B
SIRT7 sirtuin 7
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae)
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
SLC27A2 solute carrier family 27 (fatty acid transporter), member 2
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2
SLIRP SRA stem-loop interacting RNA binding protein
SLTM SAFB-like, transcription modulator
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SMC1A structural maintenance of chromosomes 1A
SMC3 structural maintenance of chromosomes 3
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNRPB2 small nuclear ribonucleoprotein polypeptide B
SNRPC small nuclear ribonucleoprotein polypeptide C
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SOGA3 SOGA family member 3
SOX15 SRY (sex determining region Y)-box 15
SP1 Sp1 transcription factor
SP3 Sp3 transcription factor
SREK1 splicing regulatory glutamine/lysine-rich protein 1
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
SRP9 signal recognition particle 9kDa
SRPRB signal recognition particle receptor, B subunit
SRSF11 serine/arginine-rich splicing factor 11
SSBP1 single-stranded DNA binding protein 1, mitochondrial
SSR4 signal sequence receptor, delta
SUB1 SUB1 homolog (S. cerevisiae)
SUMO1 small ubiquitin-like modifier 1
SUMO2 small ubiquitin-like modifier 2
SUMO3 small ubiquitin-like modifier 3
SUZ12 SUZ12 polycomb repressive complex 2 subunit
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
SYNE1 spectrin repeat containing, nuclear envelope 1
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TARDBP TAR DNA binding protein
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TERF2 telomeric repeat binding factor 2
TERF2IP telomeric repeat binding factor 2, interacting protein
TFAM transcription factor A, mitochondrial
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4)
TFB2M transcription factor B2, mitochondrial
TFCP2 transcription factor CP2
TFCP2L1 transcription factor CP2-like 1
TGFB1 transforming growth factor, beta 1
THRAP3 thyroid hormone receptor associated protein 3
THRB thyroid hormone receptor, beta
THYN1 thymocyte nuclear protein 1
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TJP1 tight junction protein 1
TOP1 topoisomerase (DNA) I
TOP2A topoisomerase (DNA) II alpha 170kDa
TOPBP1 topoisomerase (DNA) II binding protein 1
TRIM28 tripartite motif containing 28
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae)
TRMT6 tRNA methyltransferase 6
TRMT61A tRNA methyltransferase 61A
TSLIG3B tRNA splicing ligase complex subunit 3B
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
TTF2 transcription termination factor, RNA polymerase II
TUBB tubulin, beta class I
TUFM Tu translation elongation factor, mitochondrial
U2AF2 U2 small nuclear RNA auxiliary factor 2
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1
UBC ubiquitin C
UBP1 upstream binding protein 1 (LBP-1a)
UFL1 UFM1-specific ligase 1
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
USF2 upstream transcription factor 2, c-fos interacting
USP10 ubiquitin specific peptidase 10
USP39 ubiquitin specific peptidase 39
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
UXT ubiquitously-expressed, prefoldin-like chaperone
VRK1 vaccinia related kinase 1
WIZ widely interspaced zinc finger motifs
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
XRN2 5'-3' exoribonuclease 2
YBX1 Y box binding protein 1
YBX3 Y box binding protein 3
YEATS2 YEATS domain containing 2
YY1 YY1 transcription factor
ZBTB33 zinc finger and BTB domain containing 33
ZBTB7A zinc finger and BTB domain containing 7A
ZBTB7B zinc finger and BTB domain containing 7B
ZC2HC1A zinc finger, C2HC-type containing 1A
ZC3H4 zinc finger CCCH-type containing 4
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZCCHC3 zinc finger, CCHC domain containing 3
ZFP91 ZFP91 zinc finger protein
ZHX3 zinc fingers and homeoboxes 3
ZMYM1 zinc finger, MYM-type 1
ZMYM2 zinc finger, MYM-type 2
ZNF326 zinc finger protein 326
ZNF335 zinc finger protein 335
ZNF462 zinc finger protein 462
ZNF787 zinc finger protein 787
ZZZ3 zinc finger, ZZ-type containing 3