Ca-Ski Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Description A immortal human uterine cervix-derived cell line cell that has the characteristics: Human cell line derived from uterine cervical epidermoid carcinoma. TKG0366(Deposited from Tohoku Univ.). (Cell Line Ontology, CLO_0050930)
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Genes

303 genes with high or low expression in Ca-Ski relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
KCNS1 potassium voltage-gated channel, modifier subfamily S, member 1 3.54252
KRT34 keratin 34, type I 3.49083
EXT2 exostosin glycosyltransferase 2 2.87084
KRT33A keratin 33A, type I 2.83031
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 2.82303
HSF2BP heat shock transcription factor 2 binding protein 2.59356
CEP55 centrosomal protein 55kDa 2.43208
TCP11L1 t-complex 11, testis-specific-like 1 2.4279
ITGB6 integrin, beta 6 2.34765
CKAP5 cytoskeleton associated protein 5 2.33064
CAB39 calcium binding protein 39 2.32879
PANX1 pannexin 1 2.25859
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 2.25649
SAMD9 sterile alpha motif domain containing 9 2.21986
WDHD1 WD repeat and HMG-box DNA binding protein 1 2.16963
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 2.12107
STK3 serine/threonine kinase 3 2.11524
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 2.11175
YAP1 Yes-associated protein 1 2.09209
VSIG4 V-set and immunoglobulin domain containing 4 2.08992
BIRC2 baculoviral IAP repeat containing 2 2.07202
IL36R interleukin 36 receptor 2.06468
PSG5 pregnancy specific beta-1-glycoprotein 5 1.92346
TMEM123 transmembrane protein 123 1.88417
CENPQ centromere protein Q 1.87528
TLL2 tolloid-like 2 1.87285
NUP155 nucleoporin 155kDa 1.86528
GPN1 GPN-loop GTPase 1 1.8521
TRIP13 thyroid hormone receptor interactor 13 1.84981
FOLR3 folate receptor 3 (gamma) 1.81653
ZFYVE21 zinc finger, FYVE domain containing 21 1.81228
RAD54B RAD54 homolog B (S. cerevisiae) 1.79785
SETD8 SET domain containing (lysine methyltransferase) 8 1.79127
PRIM2 primase, DNA, polypeptide 2 (58kDa) 1.74765
CDKN3 cyclin-dependent kinase inhibitor 3 1.74697
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6 1.74564
IDO1 indoleamine 2,3-dioxygenase 1 1.73809
UBA6 ubiquitin-like modifier activating enzyme 6 1.72468
PSG6 pregnancy specific beta-1-glycoprotein 6 1.71666
PICALM phosphatidylinositol binding clathrin assembly protein 1.71149
EED embryonic ectoderm development 1.7001
CDCA4 cell division cycle associated 4 1.68962
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 1.68891
THBD thrombomodulin 1.68052
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 1.67349
KRT33B keratin 33B, type I 1.67301
NPC2 Niemann-Pick disease, type C2 1.66893
PEX13 peroxisomal biogenesis factor 13 1.66736
ZDHHC7 zinc finger, DHHC-type containing 7 1.6538
KDM6A lysine (K)-specific demethylase 6A 1.65375
OSR2 odd-skipped related transciption factor 2 1.65348
ZNF318 zinc finger protein 318 1.64536
NEURL1 neuralized E3 ubiquitin protein ligase 1 1.63466
IL36G interleukin 36, gamma 1.6253
PSG3 pregnancy specific beta-1-glycoprotein 3 1.61636
IRX4 iroquois homeobox 4 1.59983
ZNF45 zinc finger protein 45 1.59875
MRPS17 mitochondrial ribosomal protein S17 1.59708
ZNF165 zinc finger protein 165 1.59437
CDC6 cell division cycle 6 1.58885
PSG9 pregnancy specific beta-1-glycoprotein 9 1.58875
RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1 1.58632
TARS threonyl-tRNA synthetase 1.57297
PLAUR plasminogen activator, urokinase receptor 1.57109
POLD3 polymerase (DNA-directed), delta 3, accessory subunit 1.56984
MYO1B myosin IB 1.56187
HCG4 HLA complex group 4 (non-protein coding) 1.56047
HSPA4L heat shock 70kDa protein 4-like 1.54512
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta 1.53173
BRIX1 BRX1, biogenesis of ribosomes 1.51574
STAG3 stromal antigen 3 1.50637
PYGL phosphorylase, glycogen, liver 1.50053
BRD7 bromodomain containing 7 1.49687
WDR70 WD repeat domain 70 1.49511
PTPN21 protein tyrosine phosphatase, non-receptor type 21 1.4912
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4 1.4898
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 1.48699
B4GALT4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 1.48558
KISS1 KiSS-1 metastasis-suppressor 1.48541
PSG2 pregnancy specific beta-1-glycoprotein 2 1.48373
AURKA aurora kinase A 1.48208
GSK3B glycogen synthase kinase 3 beta 1.47879
HSPA1L heat shock 70kDa protein 1-like 1.47743
SYNE2 spectrin repeat containing, nuclear envelope 2 1.47149
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 1.46976
CD40 CD40 molecule, TNF receptor superfamily member 5 1.46861
PRPS2 phosphoribosyl pyrophosphate synthetase 2 1.46608
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1 1.46191
ERO1L ERO1-like (S. cerevisiae) 1.46134
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 1.46055
MTMR2 myotubularin related protein 2 1.45914
ANOS1 anosmin 1 1.45778
MNAT1 MNAT CDK-activating kinase assembly factor 1 1.45621
GINS1 GINS complex subunit 1 (Psf1 homolog) 1.455
CRYGA crystallin, gamma A 1.45293
BIRC3 baculoviral IAP repeat containing 3 1.45134
SERPINB7 serpin peptidase inhibitor, clade B (ovalbumin), member 7 1.4493
CENPI centromere protein I 1.44752
NCF2 neutrophil cytosolic factor 2 1.4451
ZNF214 zinc finger protein 214 1.44095
TMPRSS11D transmembrane protease, serine 11D 1.4358
SPCS3 signal peptidase complex subunit 3 homolog (S. cerevisiae) 1.43532
CDC50B cell division cycle 50 P4-ATPase accessory subunit B 1.43521
TMEM126B transmembrane protein 126B 1.42993
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) 1.42563
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 1.42228
KIF23 kinesin family member 23 1.42137
MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) 1.41943

low expression

Symbol Name Standardized Value
DET1 de-etiolated homolog 1 (Arabidopsis) -3.53725
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor -3.53725
SCGB2A2 secretoglobin, family 2A, member 2 -3.53709
IL2 interleukin 2 -3.53686
IDE insulin-degrading enzyme -3.0387
GSTM1 glutathione S-transferase mu 1 -2.99432
ASB8 ankyrin repeat and SOCS box containing 8 -2.95534
YY1AP1 YY1 associated protein 1 -2.81961
LOC647070 uncharacterized LOC647070 -2.7831
FUZ fuzzy planar cell polarity protein -2.71243
ZNF211 zinc finger protein 211 -2.63819
ANKRD6 ankyrin repeat domain 6 -2.60529
PIGG phosphatidylinositol glycan anchor biosynthesis, class G -2.59084
ADAM21 ADAM metallopeptidase domain 21 -2.47637
PRKACG protein kinase, cAMP-dependent, catalytic, gamma -2.4447
FBN1 fibrillin 1 -2.44196
DAAM2 dishevelled associated activator of morphogenesis 2 -2.42105
TBX5 T-box 5 -2.41826
DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 -2.33343
PLCL2 phospholipase C-like 2 -2.32352
SLC22A14 solute carrier family 22, member 14 -2.32323
GPM6B glycoprotein M6B -2.31673
ALG9 ALG9, alpha-1,2-mannosyltransferase -2.31502
LPXN leupaxin -2.26016
GRIA3 glutamate receptor, ionotropic, AMPA 3 -2.26009
MPC1 mitochondrial pyruvate carrier 1 -2.23494
MRPL46 mitochondrial ribosomal protein L46 -2.22778
NOX1 NADPH oxidase 1 -2.20926
NME4 NME/NM23 nucleoside diphosphate kinase 4 -2.20427
NAG18 NAG18 mRNA -2.18338
SUSD5 sushi domain containing 5 -2.18085
TTC13 tetratricopeptide repeat domain 13 -2.16367
CCDC92 coiled-coil domain containing 92 -2.12112
ATXN2L ataxin 2-like -2.09784
RAB33B RAB33B, member RAS oncogene family -2.07757
ZNF528 zinc finger protein 528 -2.07451
PSKH1 protein serine kinase H1 -2.07111
COL1A2 collagen, type I, alpha 2 -2.07074
SEC31A SEC31 homolog A (S. cerevisiae) -2.06885
PLA2G1B phospholipase A2, group IB (pancreas) -2.06308
PRLR prolactin receptor -2.06078
PHF7 PHD finger protein 7 -2.05307
NR1H3 nuclear receptor subfamily 1, group H, member 3 -2.04889
MRPL44 mitochondrial ribosomal protein L44 -2.0371
ZBTB20 zinc finger and BTB domain containing 20 -2.03084
ACAD10 acyl-CoA dehydrogenase family, member 10 -2.02934
BAHCC1 BAH domain and coiled-coil containing 1 -2.01998
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) -2.00471
TDRD3 tudor domain containing 3 -2.00392
MAGEH1 melanoma antigen family H1 -2.0008
SMG6 SMG6 nonsense mediated mRNA decay factor -1.99835
RPS27 ribosomal protein S27 -1.99009
SEPHS2 selenophosphate synthetase 2 -1.97346
C2CD2L C2CD2-like -1.96766
TEX264 testis expressed 264 -1.95197
ZNF419 zinc finger protein 419 -1.95095
PLCB4 phospholipase C, beta 4 -1.94177
DAP3 death associated protein 3 -1.93965
HYAL2 hyaluronoglucosaminidase 2 -1.9395
LPPR4 lipid phosphate phosphatase-related protein type 4 -1.93595
CIRBP cold inducible RNA binding protein -1.92253
ZNF506 zinc finger protein 506 -1.91841
TMEM115 transmembrane protein 115 -1.89981
ARHGDIG Rho GDP dissociation inhibitor (GDI) gamma -1.88824
SLC27A2 solute carrier family 27 (fatty acid transporter), member 2 -1.87154
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) -1.85986
ADAMDEC1 ADAM-like, decysin 1 -1.85767
EDAR ectodysplasin A receptor -1.85257
PYHIN1 pyrin and HIN domain family, member 1 -1.84905
CBX5 chromobox homolog 5 -1.8426
IGF2-AS IGF2 antisense RNA -1.83833
PARVB parvin, beta -1.83729
HTT huntingtin -1.83705
SIL1 SIL1 nucleotide exchange factor -1.83201
PAX4 paired box 4 -1.82138
LRRC48 leucine rich repeat containing 48 -1.81923
UROS uroporphyrinogen III synthase -1.81118
DCP1A decapping mRNA 1A -1.80336
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -1.80114
TRERF1 transcriptional regulating factor 1 -1.79784
SCN1A sodium channel, voltage gated, type I alpha subunit -1.7959
FMO5 flavin containing monooxygenase 5 -1.79362
GLRA1 glycine receptor, alpha 1 -1.79155
COL5A2 collagen, type V, alpha 2 -1.78903
KLHL22 kelch-like family member 22 -1.78443
PADI1 peptidyl arginine deiminase, type I -1.7722
ZNF134 zinc finger protein 134 -1.76888
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1 -1.76828
PMF1 polyamine-modulated factor 1 -1.75873
HYAL3 hyaluronoglucosaminidase 3 -1.75417
USP12 ubiquitin specific peptidase 12 -1.74601
BMPER BMP binding endothelial regulator -1.74446
ZNF75D zinc finger protein 75D -1.74392
TPT1 tumor protein, translationally-controlled 1 -1.7408
CPT2 carnitine palmitoyltransferase 2 -1.73894
LOC644450 uncharacterized LOC644450 -1.73698
VPRBP Vpr (HIV-1) binding protein -1.7363
RPS15A ribosomal protein S15a -1.7336
PEX14 peroxisomal biogenesis factor 14 -1.72302
TROVE2 TROVE domain family, member 2 -1.72265
PDE4B phosphodiesterase 4B, cAMP-specific -1.72079
ANK2 ankyrin 2, neuronal -1.72046
JPH3 junctophilin 3 -1.71904
N4BP2L1 NEDD4 binding protein 2-like 1 -1.71858
SCCPDH saccharopine dehydrogenase (putative) -1.71782
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 -1.7113
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 -1.70053
DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 -1.70001
LINC00339 long intergenic non-protein coding RNA 339 -1.69711
ZNF672 zinc finger protein 672 -1.69657
SSBP3 single stranded DNA binding protein 3 -1.69538
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -1.69214
SCN11A sodium channel, voltage gated, type XI alpha subunit -1.68935
CHN2 chimerin 2 -1.6885
PBLD phenazine biosynthesis-like protein domain containing -1.68474
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -1.66565
KIF5C kinesin family member 5C -1.66183
GORASP2 golgi reassembly stacking protein 2, 55kDa -1.6502
MEF2A myocyte enhancer factor 2A -1.64355
FKTN fukutin -1.64354
PTP4A3 protein tyrosine phosphatase type IVA, member 3 -1.63874
HIST1H2AM histone cluster 1, H2am -1.63758
COL3A1 collagen, type III, alpha 1 -1.62785
TMBIM4 transmembrane BAX inhibitor motif containing 4 -1.62378
SPARCL1 SPARC-like 1 (hevin) -1.61666
QPCT glutaminyl-peptide cyclotransferase -1.61215
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11 -1.60856
CADM1 cell adhesion molecule 1 -1.60734
TSNAX translin-associated factor X -1.60609
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -1.59636
POR P450 (cytochrome) oxidoreductase -1.58115
TCL6 T-cell leukemia/lymphoma 6 (non-protein coding) -1.57882
CYSLTR1 cysteinyl leukotriene receptor 1 -1.57759
DCAF8 DDB1 and CUL4 associated factor 8 -1.57752
TSPAN32 tetraspanin 32 -1.57513
PTN pleiotrophin -1.57185
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae) -1.56539
RANBP3 RAN binding protein 3 -1.55938
RPS14 ribosomal protein S14 -1.55614
DNAH17 dynein, axonemal, heavy chain 17 -1.55536
MCF2 MCF.2 cell line derived transforming sequence -1.55388
MST1 macrophage stimulating 1 -1.5526
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -1.54978
BFSP1 beaded filament structural protein 1, filensin -1.54713
CYBB cytochrome b-245, beta polypeptide -1.54627
FUS FUS RNA binding protein -1.54461
LAT linker for activation of T cells -1.53261
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -1.529
SRA1 steroid receptor RNA activator 1 -1.52636
HHLA1 HERV-H LTR-associating 1 -1.52536
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 -1.52458
XAF1 XIAP associated factor 1 -1.52307
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 -1.52257
CSF1R colony stimulating factor 1 receptor -1.5205
SCYL3 SCY1-like 3 (S. cerevisiae) -1.51157
MKRN3 makorin ring finger protein 3 -1.50983
AQP6 aquaporin 6, kidney specific -1.50557
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 -1.50507
FGF5 fibroblast growth factor 5 -1.50299
TNRC6B trinucleotide repeat containing 6B -1.50216
THAP7 THAP domain containing 7 -1.49572
PLXDC1 plexin domain containing 1 -1.49027
CRBN cereblon -1.48938
SAFB2 scaffold attachment factor B2 -1.4888
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) -1.48308
POMT2 protein-O-mannosyltransferase 2 -1.47927
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 -1.47738
VIP vasoactive intestinal peptide -1.47675
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) -1.4758
FHL1 four and a half LIM domains 1 -1.47456
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) -1.47161
TM4SF20 transmembrane 4 L six family member 20 -1.47047
ISL1 ISL LIM homeobox 1 -1.46837
CERK ceramide kinase -1.46713
DPH5 diphthamide biosynthesis 5 -1.46678
DOPEY1 dopey family member 1 -1.4652
PKN1 protein kinase N1 -1.46302
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa -1.46134
ASCL1 achaete-scute family bHLH transcription factor 1 -1.45603
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 -1.45471
KLRD1 killer cell lectin-like receptor subfamily D, member 1 -1.44819
ZNF407 zinc finger protein 407 -1.44524
FLJ11292 -1.44489
SESN1 sestrin 1 -1.44407
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12 -1.43909
OR3A1 olfactory receptor, family 3, subfamily A, member 1 -1.43637
CLEC4E C-type lectin domain family 4, member E -1.43455
PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 -1.43409
LRRC41 leucine rich repeat containing 41 -1.43288
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -1.42548
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) -1.42417
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -1.42404
PDE4D phosphodiesterase 4D, cAMP-specific -1.42092
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2 -1.42078
OTUD7B OTU deubiquitinase 7B -1.42049