Cabozantinib (S-malate)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SPTBN1 spectrin, beta, non-erythrocytic 1 0.140408
SMAD3 SMAD family member 3 0.126373
EIF1 eukaryotic translation initiation factor 1 0.101497
FNDC3B fibronectin type III domain containing 3B 0.0937094
RPL23 ribosomal protein L23 0.0888673
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0792344
NAMPT nicotinamide phosphoribosyltransferase 0.0744038
ARHGAP26 Rho GTPase activating protein 26 0.0733703
HLA-B major histocompatibility complex, class I, B 0.0732124
HLA-C major histocompatibility complex, class I, C 0.0715839
ANKRD11 ankyrin repeat domain 11 0.0708858
NRG3 neuregulin 3 0.0673536
WWTR1 WW domain containing transcription regulator 1 0.064778
APP amyloid beta (A4) precursor protein 0.0607434
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0592796
HLA-A major histocompatibility complex, class I, A 0.0575107
TOP1 topoisomerase (DNA) I 0.0557897
ZNF292 zinc finger protein 292 0.0551515
RNF213 ring finger protein 213 0.0543973
KMT2E lysine (K)-specific methyltransferase 2E 0.0526745
JAK1 Janus kinase 1 0.0523753
RAD51B RAD51 paralog B 0.0500395
PDE4D phosphodiesterase 4D, cAMP-specific 0.049388
GBP2 guanylate binding protein 2, interferon-inducible 0.0483572
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0481335
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0465471
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0464931
RPL4 ribosomal protein L4 0.0456349
HSPA8 heat shock 70kDa protein 8 0.0446412
MYH9 myosin, heavy chain 9, non-muscle 0.0442744
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0442627
TMSB4X thymosin beta 4, X-linked 0.0436001
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0434617
RPL11 ribosomal protein L11 0.0432076
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0431681
TMEM51 transmembrane protein 51 0.0429181
TPT1 tumor protein, translationally-controlled 1 0.0428804
ACTG1 actin gamma 1 0.0426252
USP3 ubiquitin specific peptidase 3 0.0425454
WAC WW domain containing adaptor with coiled-coil 0.0425187
NRP1 neuropilin 1 0.0423219
HPCAL1 hippocalcin-like 1 0.0423149
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0423029
MEF2A myocyte enhancer factor 2A 0.0419363
EFNA5 ephrin-A5 0.0418575
CCNY cyclin Y 0.0416816
APOL2 apolipoprotein L, 2 0.0416009
B2M beta-2-microglobulin 0.0409242
FAM13A family with sequence similarity 13, member A 0.0406074
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0405263
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0399051
PGK1 phosphoglycerate kinase 1 0.039887
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0394727
HELZ helicase with zinc finger 0.0389862
OGA O-GlcNAcase 0.0389628
DSCAM Down syndrome cell adhesion molecule 0.0388761
TNIP1 TNFAIP3 interacting protein 1 0.0383579
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0378373
APLP2 amyloid beta (A4) precursor-like protein 2 0.037733
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0372696
CLMN calmin (calponin-like, transmembrane) 0.0367962
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0367345
TGM2 transglutaminase 2 0.0366749
SRRM2 serine/arginine repetitive matrix 2 0.0363992
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0363249
PHF3 PHD finger protein 3 0.0353896
NRIP1 nuclear receptor interacting protein 1 0.0353894
IRAK3 interleukin-1 receptor-associated kinase 3 0.0353044
LOC112694756 uncharaterized LOC112694756 0.0350328
GCLC glutamate-cysteine ligase, catalytic subunit 0.0347505
RPL19 ribosomal protein L19 0.0345587
RPL35A ribosomal protein L35a 0.0345316
RICTOR RPTOR independent companion of MTOR, complex 2 0.0344781
MARCHF6 membrane associated ring-CH-type finger 6 0.0337971
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.0337106
CD47 CD47 molecule 0.0336366
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0336164
KIAA1217 KIAA1217 0.033451
ARHGAP12 Rho GTPase activating protein 12 0.0333471
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 0.0333195
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0330052
GABRP gamma-aminobutyric acid (GABA) A receptor, pi 0.0327898
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0326302
CDC73 cell division cycle 73 0.0324852
RPS6 ribosomal protein S6 0.0324018
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0323947
ADAR adenosine deaminase, RNA-specific 0.0322943
PTMA prothymosin, alpha 0.0321941
RAP2B RAP2B, member of RAS oncogene family 0.0321148
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0318453
PLAU plasminogen activator, urokinase 0.0314775
RNF149 ring finger protein 149 0.0313911
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0313132
DPYD dihydropyrimidine dehydrogenase 0.0312706
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0309517
ITGB8 integrin, beta 8 0.0309258
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0305997
FXR1 fragile X mental retardation, autosomal homolog 1 0.0304836
DENND4A DENN/MADD domain containing 4A 0.0304537
UBE2H ubiquitin-conjugating enzyme E2H 0.0303927

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.152202
LAMB3 laminin, beta 3 -0.149352
F3 coagulation factor III (thromboplastin, tissue factor) -0.136819
AKAP12 A kinase (PRKA) anchor protein 12 -0.136507
NDRG1 N-myc downstream regulated 1 -0.130092
KRT19 keratin 19, type I -0.0831928
EZR ezrin -0.0763011
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0750143
LAMA4 laminin, alpha 4 -0.0710637
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.07059
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0681216
LMO7 LIM domain 7 -0.0667881
MMP7 matrix metallopeptidase 7 -0.0663024
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0635563
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0629599
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0624632
PKM pyruvate kinase, muscle -0.0602448
RASAL2 RAS protein activator like 2 -0.0600522
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0586127
RAB7A RAB7A, member RAS oncogene family -0.054595
MT1X metallothionein 1X -0.0540502
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0535729
POTEF POTE ankyrin domain family, member F -0.052582
ESYT2 extended synaptotagmin-like protein 2 -0.0512874
FLNB filamin B, beta -0.0501205
KMT2C lysine (K)-specific methyltransferase 2C -0.0487135
DTNA dystrobrevin, alpha -0.0475088
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0465923
MAP1B microtubule-associated protein 1B -0.0459732
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa -0.0451888
ALCAM activated leukocyte cell adhesion molecule -0.045122
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0450471
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0450239
RIOK3 RIO kinase 3 -0.0443629
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0431772
ENO1 enolase 1, (alpha) -0.0431257
LDHA lactate dehydrogenase A -0.0425981
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0423245
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0422052
TPM4 tropomyosin 4 -0.0414963
PLAT plasminogen activator, tissue -0.0403695
UBC ubiquitin C -0.0398347
BLZF1 basic leucine zipper nuclear factor 1 -0.0387116
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0384206
FOSL1 FOS-like antigen 1 -0.0381274
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.037859
DST dystonin -0.0366552
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0365869
HMGA1 high mobility group AT-hook 1 -0.0364152
KDM5B lysine (K)-specific demethylase 5B -0.0363446
LAMC2 laminin, gamma 2 -0.0361431
RCOR1 REST corepressor 1 -0.0360729
SACK1A scaffolding CK1 anchoring protein A -0.034747
TRIO trio Rho guanine nucleotide exchange factor -0.0339779
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0338324
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0337206
DSPP dentin sialophosphoprotein -0.0323202
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0323099
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0319045
GREB1L growth regulation by estrogen in breast cancer-like -0.0317554
JUP junction plakoglobin -0.0314352
NABP1 nucleic acid binding protein 1 -0.0309119
NPEPPS aminopeptidase puromycin sensitive -0.0303711
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0301992
EGR1 early growth response 1 -0.0298813
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0297885
SEC31A SEC31 homolog A (S. cerevisiae) -0.0295714
EHBP1 EH domain binding protein 1 -0.0290106
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0289652
HMGA2 high mobility group AT-hook 2 -0.0287335
ANXA1 annexin A1 -0.0286921
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0283703
HDAC9 histone deacetylase 9 -0.0282722
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0282714
AREG amphiregulin -0.0272549
S100A6 S100 calcium binding protein A6 -0.0272274
SGMS2 sphingomyelin synthase 2 -0.0266611
FNIP1 folliculin interacting protein 1 -0.0265301
LOC102724023 ES1 protein homolog, mitochondrial -0.0264176
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0258983
GRB10 growth factor receptor-bound protein 10 -0.0256396
BCAR3 breast cancer anti-estrogen resistance 3 -0.0254006
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0253459
DHRS9 dehydrogenase/reductase (SDR family) member 9 -0.0253434
FRYL FRY-like -0.0251899
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0249714
STC2 stanniocalcin 2 -0.0248245
CSNK1A1 casein kinase 1, alpha 1 -0.0247882
VDAC1 voltage-dependent anion channel 1 -0.0247773
PATJ PATJ crumbs cell polarity complex component -0.0247569
OSMR oncostatin M receptor -0.0245879
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0245403
SPAG9 sperm associated antigen 9 -0.0241726
ITGA6 integrin, alpha 6 -0.0241387
ANXA3 annexin A3 -0.0238336
SVIL supervillin -0.0238265
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0233899
RAB6A RAB6A, member RAS oncogene family -0.0233288
ARHGAP29 Rho GTPase activating protein 29 -0.0232153
S100A11 S100 calcium binding protein A11 -0.0230642