Cabozantinib (S-malate)_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.243953
NUPR1 nuclear protein, transcriptional regulator, 1 0.0823986
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0783017
SYNE2 spectrin repeat containing, nuclear envelope 2 0.075432
DSPP dentin sialophosphoprotein 0.0734779
VEGFA vascular endothelial growth factor A 0.0730188
RAD51B RAD51 paralog B 0.0692158
TMC5 transmembrane channel-like 5 0.0658336
PRELID2 PRELI domain containing 2 0.0526683
RNF213 ring finger protein 213 0.0523408
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.051936
MBNL2 muscleblind-like splicing regulator 2 0.0490952
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0466725
PTPRK protein tyrosine phosphatase, receptor type, K 0.0466102
TNS3 tensin 3 0.0458821
B2M beta-2-microglobulin 0.0453382
ATF7IP2 activating transcription factor 7 interacting protein 2 0.0425672
TMEM45B transmembrane protein 45B 0.0424936
FAAH2 fatty acid amide hydrolase 2 0.0411147
N4BP2L2 NEDD4 binding protein 2-like 2 0.0405086
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.037964
HLA-B major histocompatibility complex, class I, B 0.0358431
MACROD2 MACRO domain containing 2 0.0342897
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0338759
HLA-A major histocompatibility complex, class I, A 0.0326226
CDK19 cyclin-dependent kinase 19 0.0316292
ARHGAP32 Rho GTPase activating protein 32 0.0315803
CAPN5 calpain 5 0.0313071
SRRM2 serine/arginine repetitive matrix 2 0.0312542
ZNF292 zinc finger protein 292 0.0311603
EXOC4 exocyst complex component 4 0.0307318
FOXP1 forkhead box P1 0.0306806
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0305375
RUNX1 runt-related transcription factor 1 0.0305002
HKDC1 hexokinase domain containing 1 0.0302588
BCAS3 breast carcinoma amplified sequence 3 0.029366
MYH9 myosin, heavy chain 9, non-muscle 0.0288501
FRY furry homolog (Drosophila) 0.0285349
APLP2 amyloid beta (A4) precursor-like protein 2 0.0283347
DNM2 dynamin 2 0.0280331
RAB40B RAB40B, member RAS oncogene family 0.0277434
TXNIP thioredoxin interacting protein 0.027517
TNRC6B trinucleotide repeat containing 6B 0.0273406
BBS9 Bardet-Biedl syndrome 9 0.0273008
NUMA1 nuclear mitotic apparatus protein 1 0.026919
PRKN parkin RBR E3 ubiquitin protein ligase 0.0268571
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0268383
PRSS3 protease, serine, 3 0.0258223
FOSL2 FOS-like antigen 2 0.0252546
ATXN1 ataxin 1 0.0251368
NFE2L1 nuclear factor, erythroid 2-like 1 0.0250903
CLDN4 claudin 4 0.0246435
CNKSR3 CNKSR family member 3 0.0245773
KLHL29 kelch-like family member 29 0.0240637
SORBS2 sorbin and SH3 domain containing 2 0.0238723
PHF3 PHD finger protein 3 0.0236165
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0236118
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0234148
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0232221
RBM47 RNA binding motif protein 47 0.0231207
ALPK1 alpha-kinase 1 0.0229478
MUC1 mucin 1, cell surface associated 0.0225533
ATF5 activating transcription factor 5 0.0224641
RNF145 ring finger protein 145 0.0223272
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0223198
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0221898
PCBP2 poly(rC) binding protein 2 0.0221229
LURAP1L leucine rich adaptor protein 1-like 0.0214405
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0214154
TRIM2 tripartite motif containing 2 0.0213438
SETD5 SET domain containing 5 0.0212865
MACC1 metastasis associated in colon cancer 1 0.0211377
EPB41 erythrocyte membrane protein band 4.1 0.0209029
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.020594
NBR1 neighbor of BRCA1 gene 1 0.0205302
NCOR2 nuclear receptor corepressor 2 0.0204366
FTH1 ferritin, heavy polypeptide 1 0.0203109
TBC1D5 TBC1 domain family, member 5 0.020268
ZMYND8 zinc finger, MYND-type containing 8 0.0202075
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0199657
LCN2 lipocalin 2 0.0198968
ATP9A ATPase, class II, type 9A 0.0198559
SCAPER S-phase cyclin A-associated protein in the ER 0.0197657
EEIG1 estrogen-induced osteoclastogenesis regulator 1 0.0196808
SSH2 slingshot protein phosphatase 2 0.019607
ATM ATM serine/threonine kinase 0.0196047
KLF3 Kruppel-like factor 3 (basic) 0.0195758
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0194914
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0193575
ERBB3 erb-b2 receptor tyrosine kinase 3 0.0190265
PCM1 pericentriolar material 1 0.018878
MYO9A myosin IXA 0.018851
NDRG1 N-myc downstream regulated 1 0.018806
KIF16B kinesin family member 16B 0.018779
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0181569
KLHL24 kelch-like family member 24 0.0181453
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0181288
FOXN3 forkhead box N3 0.0180886
LDLRAD4 low density lipoprotein receptor class A domain containing 4 0.017985
MECOM MDS1 and EVI1 complex locus 0.0179249

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.270488
CEMIP cell migration inducing protein, hyaluronan binding -0.181646
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.165322
GMDS GDP-mannose 4,6-dehydratase -0.154474
EMP1 epithelial membrane protein 1 -0.113506
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.105431
ANXA2 annexin A2 -0.0971223
LMO7 LIM domain 7 -0.0863122
AGR2 anterior gradient 2 -0.0779681
KRT18 keratin 18, type I -0.0778163
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0717636
EZR ezrin -0.070909
FLNB filamin B, beta -0.0705364
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0675909
EHBP1 EH domain binding protein 1 -0.0602807
FAT1 FAT atypical cadherin 1 -0.0584504
KRT8 keratin 8, type II -0.0573172
TXNRD1 thioredoxin reductase 1 -0.0552054
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0524857
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.051721
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0506974
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0479299
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0461728
ASPH aspartate beta-hydroxylase -0.0455163
ACTN4 actinin, alpha 4 -0.044514
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0441098
S100A6 S100 calcium binding protein A6 -0.0440458
ANLN anillin, actin binding protein -0.0430585
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0429445
BCL2L1 BCL2-like 1 -0.040824
TPT1 tumor protein, translationally-controlled 1 -0.0396805
MYOF myoferlin -0.0387074
RRBP1 ribosome binding protein 1 -0.0386166
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0374913
PDIA4 protein disulfide isomerase family A, member 4 -0.0371657
CAPN8 calpain 8 -0.0369032
PDIA3 protein disulfide isomerase family A, member 3 -0.0367403
ECT2 epithelial cell transforming 2 -0.036712
FNDC3B fibronectin type III domain containing 3B -0.0360339
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0358421
CLTC clathrin, heavy chain (Hc) -0.0358307
S100A10 S100 calcium binding protein A10 -0.0347
ZFAND3 zinc finger, AN1-type domain 3 -0.0346079
RAB1A RAB1A, member RAS oncogene family -0.034596
RBM39 RNA binding motif protein 39 -0.0343528
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.033898
MORF4L2 mortality factor 4 like 2 -0.0336499
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0334869
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0334345
TPM4 tropomyosin 4 -0.0331974
CANX calnexin -0.0325688
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0325581
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.032214
MYO6 myosin VI -0.0321134
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0319582
GOLGA4 golgin A4 -0.0314649
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0310158
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0307575
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0303653
TOP1 topoisomerase (DNA) I -0.0296824
TES testin LIM domain protein -0.0286688
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0272482
KDM3A lysine (K)-specific demethylase 3A -0.0270653
ITGA6 integrin, alpha 6 -0.0267859
SNX9 sorting nexin 9 -0.0266789
SLC38A1 solute carrier family 38, member 1 -0.0266737
ACACA acetyl-CoA carboxylase alpha -0.0265318
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.026318
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0260412
WWC1 WW and C2 domain containing 1 -0.0260242
HM13 histocompatibility (minor) 13 -0.0256202
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0253339
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0252115
ACTG1 actin gamma 1 -0.0250241
ARHGAP26 Rho GTPase activating protein 26 -0.0249757
MACF1 microtubule-actin crosslinking factor 1 -0.024864
CALU calumenin -0.0247845
GARS1 glycyl-tRNA synthetase 1 -0.0244041
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0242958
H1-0 H1.0 linker histone -0.0242362
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.024233
PRKCA protein kinase C, alpha -0.0240251
CDK6 cyclin-dependent kinase 6 -0.0240178
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0236247
DLG1 discs, large homolog 1 (Drosophila) -0.0236078
TMSB10 thymosin beta 10 -0.0235087
KRT19 keratin 19, type I -0.0234825
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0232689
MAML2 mastermind-like 2 (Drosophila) -0.023197
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0231961
KIF5B kinesin family member 5B -0.0226718
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0225255
CCDC47 coiled-coil domain containing 47 -0.0224556
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0223679
ANXA1 annexin A1 -0.0223515
RAB2A RAB2A, member RAS oncogene family -0.0217574
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0215525
IARS1 isoleucyl-tRNA synthetase 1 -0.0212838
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0212794
ERRFI1 ERBB receptor feedback inhibitor 1 -0.021218