Cabozantinib (S-malate)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.117894
GPHN gephyrin 0.10624
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.101019
RPS6 ribosomal protein S6 0.100718
GOLGA4 golgin A4 0.0947868
SRRM2 serine/arginine repetitive matrix 2 0.0943373
RNF145 ring finger protein 145 0.0921683
MUC6 mucin 6, oligomeric mucus/gel-forming 0.089743
VEGFA vascular endothelial growth factor A 0.0825435
PABPC1 poly(A) binding protein, cytoplasmic 1 0.076375
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0702016
RNF43 ring finger protein 43 0.0700245
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0662319
EIF1 eukaryotic translation initiation factor 1 0.0654574
FTH1 ferritin, heavy polypeptide 1 0.0641559
ANKRD11 ankyrin repeat domain 11 0.0629495
FAM13A family with sequence similarity 13, member A 0.0563381
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0556163
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0543879
PTEN phosphatase and tensin homolog 0.053219
CALR calreticulin 0.0525785
EEF2 eukaryotic translation elongation factor 2 0.0525588
CEMIP2 cell migration inducing hyaluronidase 2 0.0492126
MLEC malectin 0.0489299
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0473444
SETD5 SET domain containing 5 0.0472412
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0465803
MED13L mediator complex subunit 13-like 0.0460327
RPS19 ribosomal protein S19 0.0446031
OGA O-GlcNAcase 0.0444223
ZFAND3 zinc finger, AN1-type domain 3 0.0440671
PNISR PNN-interacting serine/arginine-rich protein 0.0432323
TXNIP thioredoxin interacting protein 0.041608
PRRC2C proline-rich coiled-coil 2C 0.0397589
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0397186
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0395256
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0393774
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0392401
GARS1 glycyl-tRNA synthetase 1 0.0389257
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.038822
NEBL nebulette 0.0384651
TRIM2 tripartite motif containing 2 0.0383726
CD46 CD46 molecule, complement regulatory protein 0.038244
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0380008
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0379395
ESRP1 epithelial splicing regulatory protein 1 0.037758
NCOR1 nuclear receptor corepressor 1 0.0376154
DNM2 dynamin 2 0.0373322
MYO10 myosin X 0.0371538
MON2 MON2 homolog (S. cerevisiae) 0.0368567
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.036695
KMT2E lysine (K)-specific methyltransferase 2E 0.0364828
RPL23 ribosomal protein L23 0.0360866
ZNF292 zinc finger protein 292 0.035774
PTMA prothymosin, alpha 0.0355433
AKAP9 A kinase (PRKA) anchor protein 9 0.0355431
RBM39 RNA binding motif protein 39 0.0352971
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0351324
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0350386
PCM1 pericentriolar material 1 0.0345931
WAC WW domain containing adaptor with coiled-coil 0.0342146
PCBP2 poly(rC) binding protein 2 0.0337272
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.033565
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0335041
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0334589
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0332156
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0327008
FNBP1L formin binding protein 1-like 0.0319064
PIGR polymeric immunoglobulin receptor 0.0315391
IARS1 isoleucyl-tRNA synthetase 1 0.0315176
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0313014
PDIA3 protein disulfide isomerase family A, member 3 0.0308932
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0307727
PDIA4 protein disulfide isomerase family A, member 4 0.0307475
PCDHB16 protocadherin beta 16 0.030576
BTBD9 BTB (POZ) domain containing 9 0.0305325
SREBF2 sterol regulatory element binding transcription factor 2 0.0305307
ITGA6 integrin, alpha 6 0.0305179
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0304938
EPHB2 EPH receptor B2 0.0304608
EIF4B eukaryotic translation initiation factor 4B 0.0303055
DSCAM Down syndrome cell adhesion molecule 0.0301019
COPA coatomer protein complex, subunit alpha 0.0296174
USP3 ubiquitin specific peptidase 3 0.0295502
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0293323
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0292229
HELZ helicase with zinc finger 0.0292198
S100P S100 calcium binding protein P 0.0291845
CTBP2 C-terminal binding protein 2 0.02918
FOXJ3 forkhead box J3 0.0291037
RPLP2 ribosomal protein, large, P2 0.0288581
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0287915
RPL36 ribosomal protein L36 0.0287548
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0287344
RPL11 ribosomal protein L11 0.0287136
DERA deoxyribose-phosphate aldolase (putative) 0.028665
MATR3 matrin 3 0.0285834
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0285455
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0284086
COG5 component of oligomeric golgi complex 5 0.0283496

decreased expression

Symbol Name Standardized Value
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.165799
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.163351
NPSR1 neuropeptide S receptor 1 -0.15006
VCL vinculin -0.139555
ANTXR2 anthrax toxin receptor 2 -0.0892745
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0886896
ANXA2 annexin A2 -0.0850819
TPT1 tumor protein, translationally-controlled 1 -0.0797835
MYO1E myosin IE -0.0788018
LAMA4 laminin, alpha 4 -0.077937
ONECUT3 one cut homeobox 3 -0.0778486
TPM4 tropomyosin 4 -0.0753364
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0741872
GREB1L growth regulation by estrogen in breast cancer-like -0.0728966
NALF1 NALCN channel auxiliary factor 1 -0.0697109
PSD3 pleckstrin and Sec7 domain containing 3 -0.0690312
ASPH aspartate beta-hydroxylase -0.0683286
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0631931
SLC35F3 solute carrier family 35, member F3 -0.0589099
PDLIM5 PDZ and LIM domain 5 -0.0585902
EXT1 exostosin glycosyltransferase 1 -0.0539561
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0526375
ALCAM activated leukocyte cell adhesion molecule -0.0522497
FLNB filamin B, beta -0.051266
AHNAK AHNAK nucleoprotein -0.0494196
KRT18 keratin 18, type I -0.0486699
IER3 immediate early response 3 -0.0464386
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0429301
PTPRK protein tyrosine phosphatase, receptor type, K -0.0422852
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0421165
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0417879
KLF6 Kruppel-like factor 6 -0.041243
MBNL1 muscleblind-like splicing regulator 1 -0.0396843
LDHA lactate dehydrogenase A -0.0389433
USP53 ubiquitin specific peptidase 53 -0.03704
KRT19 keratin 19, type I -0.0370207
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0357006
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.0355946
EGFR epidermal growth factor receptor -0.0349028
MACF1 microtubule-actin crosslinking factor 1 -0.0343674
PTPRB protein tyrosine phosphatase, receptor type, B -0.0342929
ACTG1 actin gamma 1 -0.0341999
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0337464
FERMT1 fermitin family member 1 -0.0336971
EZR ezrin -0.0329656
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0329506
RNF217 ring finger protein 217 -0.0327283
F3 coagulation factor III (thromboplastin, tissue factor) -0.0326358
EMP1 epithelial membrane protein 1 -0.0325375
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.032441
S100A6 S100 calcium binding protein A6 -0.0321443
CCND1 cyclin D1 -0.0318903
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.0307593
PALLD palladin, cytoskeletal associated protein -0.0306898
KLF5 Kruppel-like factor 5 (intestinal) -0.0304857
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.030435
MAML3 mastermind-like 3 (Drosophila) -0.0293207
GMDS GDP-mannose 4,6-dehydratase -0.0281222
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0272839
RCOR1 REST corepressor 1 -0.0270738
TFF1 trefoil factor 1 -0.0270558
PCDH9 protocadherin 9 -0.0266722
RPS24 ribosomal protein S24 -0.0266521
ANXA3 annexin A3 -0.0262494
LMO7 LIM domain 7 -0.026124
MYOF myoferlin -0.0259739
LAMC2 laminin, gamma 2 -0.0259366
SOX4 SRY (sex determining region Y)-box 4 -0.0256703
S100A10 S100 calcium binding protein A10 -0.0253902
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0253638
MUC17 mucin 17, cell surface associated -0.0253512
MYH14 myosin, heavy chain 14, non-muscle -0.0250911
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.02502
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0249529
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0248342
SH3D19 SH3 domain containing 19 -0.0244392
ACTN4 actinin, alpha 4 -0.024405
MARCHF3 membrane associated ring-CH-type finger 3 -0.0242029
LAMB3 laminin, beta 3 -0.0241464
CADPS Ca++-dependent secretion activator -0.0237354
POF1B premature ovarian failure, 1B -0.0236289
PATJ PATJ crumbs cell polarity complex component -0.0236012
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0231628
EHBP1 EH domain binding protein 1 -0.0231418
ITPRID2 ITPR interacting domain containing 2 -0.0230687
FRMD5 FERM domain containing 5 -0.0230612
LPP LIM domain containing preferred translocation partner in lipoma -0.0225846
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0224676
IGFL2 IGF-like family member 2 -0.0224498
MAML2 mastermind-like 2 (Drosophila) -0.0223364
CLOCK clock circadian regulator -0.0221158
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0219618
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0219344
EGR1 early growth response 1 -0.021889
GLS2 glutaminase 2 (liver, mitochondrial) -0.0218022
RIGI RNA sensor RIG-I -0.0216302
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0215321
EFNB2 ephrin-B2 -0.0215047
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0213959
IFRD1 interferon-related developmental regulator 1 -0.0211024