Cabozantinib (S-malate)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.172836
PDE4D phosphodiesterase 4D, cAMP-specific 0.160455
SRRM2 serine/arginine repetitive matrix 2 0.159082
BACE2 beta-site APP-cleaving enzyme 2 0.125914
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.103481
CCSER1 coiled-coil serine-rich protein 1 0.0985536
PRELID2 PRELI domain containing 2 0.0826895
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.0753357
KTN1 kinectin 1 (kinesin receptor) 0.0722708
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0720871
PTPRR protein tyrosine phosphatase, receptor type, R 0.0719525
RAD51B RAD51 paralog B 0.0718912
RPL21 ribosomal protein L21 0.0707469
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type 0.0695922
FAT1 FAT atypical cadherin 1 0.0678462
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0664979
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0662522
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0619229
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0605555
RNF145 ring finger protein 145 0.0571548
EGFR epidermal growth factor receptor 0.0568509
RPL3 ribosomal protein L3 0.0565999
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0557189
RPS19 ribosomal protein S19 0.0556791
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0556371
SPON1 spondin 1, extracellular matrix protein 0.0524621
ETV6 ets variant 6 0.0523865
RPL23 ribosomal protein L23 0.051713
EIF4B eukaryotic translation initiation factor 4B 0.0513644
PCBP2 poly(rC) binding protein 2 0.0512421
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 0.0510797
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0490411
HLA-B major histocompatibility complex, class I, B 0.0486975
EIF1 eukaryotic translation initiation factor 1 0.0482512
FOXO1 forkhead box O1 0.0469869
RPL28 ribosomal protein L28 0.046862
TNRC18 trinucleotide repeat containing 18 0.0456947
ATXN1 ataxin 1 0.0456345
UTRN utrophin 0.0455081
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0437322
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0436868
MAP7 microtubule-associated protein 7 0.0429821
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0423325
RPL13A ribosomal protein L13a 0.0421165
MPRIP myosin phosphatase Rho interacting protein 0.041758
RPS20 ribosomal protein S20 0.0410839
RPS12 ribosomal protein S12 0.0402218
EEF2 eukaryotic translation elongation factor 2 0.0396965
EEF1G eukaryotic translation elongation factor 1 gamma 0.0389675
N4BP2L2 NEDD4 binding protein 2-like 2 0.0386082
RPL4 ribosomal protein L4 0.0384517
KIF16B kinesin family member 16B 0.0383818
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0383261
VEGFA vascular endothelial growth factor A 0.0380267
LPP LIM domain containing preferred translocation partner in lipoma 0.037495
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.037382
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0372296
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 0.0371667
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0371347
NCOR2 nuclear receptor corepressor 2 0.0368804
FOXP1 forkhead box P1 0.0365995
NEBL nebulette 0.0364991
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0363291
MYH9 myosin, heavy chain 9, non-muscle 0.0362487
ACTG1 actin gamma 1 0.0354914
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0353294
FAM13A family with sequence similarity 13, member A 0.0349719
RPS27 ribosomal protein S27 0.0348239
LOC105378220 macrophage receptor MARCO-like 0.033977
NACA nascent polypeptide-associated complex alpha subunit 0.0339234
DAPK1 death-associated protein kinase 1 0.0337569
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0336928
IRS2 insulin receptor substrate 2 0.0334417
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0329778
AFF1 AF4/FMR2 family, member 1 0.0316951
CCPG1 cell cycle progression 1 0.0313269
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0309559
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0308939
AKAP9 A kinase (PRKA) anchor protein 9 0.0308066
UST uronyl-2-sulfotransferase 0.0305967
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 0.0305717
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0305467
ITGB4 integrin, beta 4 0.0300458
BRD2 bromodomain containing 2 0.029412
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0291584
PDIA3 protein disulfide isomerase family A, member 3 0.029061
HLA-A major histocompatibility complex, class I, A 0.0290468
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0289331
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0286808
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0285424
CEMIP2 cell migration inducing hyaluronidase 2 0.0284565
DST dystonin 0.0283543
RPL8 ribosomal protein L8 0.0282648
KMT2D lysine (K)-specific methyltransferase 2D 0.0278124
RPL37 ribosomal protein L37 0.027636
SMAD3 SMAD family member 3 0.0275669
RPS8 ribosomal protein S8 0.0275668
RPL37A ribosomal protein L37a 0.0275384
KIZ kizuna centrosomal protein 0.0272574
GOLGB1 golgin B1 0.0270115

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.167901
ANXA2 annexin A2 -0.120563
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.10691
MYOF myoferlin -0.101285
EZR ezrin -0.100852
FLNB filamin B, beta -0.0925065
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.092265
TXNRD1 thioredoxin reductase 1 -0.091833
MSI2 musashi RNA-binding protein 2 -0.0915632
TPT1 tumor protein, translationally-controlled 1 -0.0872646
RPLP1 ribosomal protein, large, P1 -0.0786178
TMSB10 thymosin beta 10 -0.0782436
LAMB3 laminin, beta 3 -0.0766444
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0598922
PKM pyruvate kinase, muscle -0.0572147
ACTN4 actinin, alpha 4 -0.0525266
RPS24 ribosomal protein S24 -0.051286
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0510694
EREG epiregulin -0.0509109
VCL vinculin -0.0496801
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0495248
TC2N tandem C2 domains, nuclear -0.0481268
GMDS GDP-mannose 4,6-dehydratase -0.0478759
NAP1L1 nucleosome assembly protein 1-like 1 -0.0471427
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0463902
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0462131
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0460436
LAMA4 laminin, alpha 4 -0.0439334
S100A10 S100 calcium binding protein A10 -0.0436083
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0386226
OXSR1 oxidative stress responsive 1 -0.037605
RPLP0 ribosomal protein, large, P0 -0.0359022
EPCAM epithelial cell adhesion molecule -0.0353725
IARS1 isoleucyl-tRNA synthetase 1 -0.035216
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0351595
VDAC1 voltage-dependent anion channel 1 -0.0349712
RRBP1 ribosome binding protein 1 -0.0349247
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0344229
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.034411
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0342802
EMP1 epithelial membrane protein 1 -0.034191
DSG3 desmoglein 3 -0.034162
IER3 immediate early response 3 -0.0331324
CLOCK clock circadian regulator -0.0326372
PTMA prothymosin, alpha -0.032446
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0323344
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0304291
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0303885
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0301399
SPAG9 sperm associated antigen 9 -0.0299178
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0292611
MARCHF6 membrane associated ring-CH-type finger 6 -0.0292269
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0291982
C6ORF132 chromosome 6 open reading frame 132 -0.0290913
PPARG peroxisome proliferator-activated receptor gamma -0.0290728
FERMT1 fermitin family member 1 -0.0287733
NT5C2 5'-nucleotidase, cytosolic II -0.0274049
IFRD1 interferon-related developmental regulator 1 -0.0270725
LMNA lamin A/C -0.027026
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0266862
KDM3A lysine (K)-specific demethylase 3A -0.0264889
CCND1 cyclin D1 -0.026417
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0263764
F3 coagulation factor III (thromboplastin, tissue factor) -0.0263582
KRT19 keratin 19, type I -0.0261316
P3H2 prolyl 3-hydroxylase 2 -0.0261293
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0260046
PRSS3 protease, serine, 3 -0.025256
MATR3 matrin 3 -0.0251334
AHNAK AHNAK nucleoprotein -0.0250816
PCDHB16 protocadherin beta 16 -0.0246493
MTDH metadherin -0.0246143
MORF4L2 mortality factor 4 like 2 -0.0245297
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0245033
ARF1 ADP-ribosylation factor 1 -0.0245007
MKI67 marker of proliferation Ki-67 -0.0244997
CCNI cyclin I -0.0243031
RIGI RNA sensor RIG-I -0.0242722
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0240787
SEC31A SEC31 homolog A (S. cerevisiae) -0.0238562
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0237699
SERINC5 serine incorporator 5 -0.023653
GDF15 growth differentiation factor 15 -0.0235568
KRT8 keratin 8, type II -0.0234939
PTPRK protein tyrosine phosphatase, receptor type, K -0.0233707
IFIH1 interferon induced with helicase C domain 1 -0.023317
AHCYL2 adenosylhomocysteinase-like 2 -0.0230625
SLMAP sarcolemma associated protein -0.0229548
COPS2 COP9 signalosome subunit 2 -0.0227891
MYO5B myosin VB -0.0227138
CALU calumenin -0.0225409
RPL6 ribosomal protein L6 -0.0224708
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0224475
RTN4 reticulon 4 -0.0224299
NPR2 natriuretic peptide receptor 2 -0.0224186
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0222905
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0221999
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.0221981
SKP1 S-phase kinase-associated protein 1 -0.0221476
HEPH hephaestin -0.0220932