Cabozantinib (S-malate)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRAMD1B GRAM domain containing 1B 0.209905
SMAD3 SMAD family member 3 0.0897122
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0799191
EEF2 eukaryotic translation elongation factor 2 0.0778674
TPM3 tropomyosin 3 0.0754054
ADAR adenosine deaminase, RNA-specific 0.0666729
PLEC plectin 0.0648693
TXNRD1 thioredoxin reductase 1 0.063582
RAD51B RAD51 paralog B 0.0620775
SRRM2 serine/arginine repetitive matrix 2 0.059406
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0549287
NCAPD2 non-SMC condensin I complex, subunit D2 0.0539578
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0539525
RNF145 ring finger protein 145 0.0526896
EXOC6B exocyst complex component 6B 0.0522465
EIF4B eukaryotic translation initiation factor 4B 0.0517896
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.051755
HSPA8 heat shock 70kDa protein 8 0.0496435
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0492538
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.045649
ZBTB20 zinc finger and BTB domain containing 20 0.0445383
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0428931
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0428495
NUMA1 nuclear mitotic apparatus protein 1 0.0424231
SLC38A2 solute carrier family 38, member 2 0.0422477
KMT2D lysine (K)-specific methyltransferase 2D 0.0415701
CEP250 centrosomal protein 250kDa 0.0414567
BCAS3 breast carcinoma amplified sequence 3 0.0406049
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0401286
MED13L mediator complex subunit 13-like 0.0397039
PCBP2 poly(rC) binding protein 2 0.0394944
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0394869
GATAD2B GATA zinc finger domain containing 2B 0.0386282
RBM33 RNA binding motif protein 33 0.0384547
ANKRD36 ankyrin repeat domain 36 0.0382665
ZNF638 zinc finger protein 638 0.0376175
ATP11A ATPase, class VI, type 11A 0.0376023
DOCK3 dedicator of cytokinesis 3 0.0358717
NOTCH2 notch 2 0.0357243
WNK1 WNK lysine deficient protein kinase 1 0.0355959
MSH6 mutS homolog 6 0.0352996
XPO1 exportin 1 0.0351785
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 0.0349795
KRT18 keratin 18, type I 0.0349467
YAP1 Yes-associated protein 1 0.0343482
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 0.0342905
RUSC2 RUN and SH3 domain containing 2 0.0339531
SRBD1 S1 RNA binding domain 1 0.0332918
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0332294
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0332002
CTTN cortactin 0.0330807
TRIO trio Rho guanine nucleotide exchange factor 0.0330433
MYH9 myosin, heavy chain 9, non-muscle 0.0324191
SPIDR scaffolding protein involved in DNA repair 0.0322764
PDE4D phosphodiesterase 4D, cAMP-specific 0.0314516
THSD4 thrombospondin, type I, domain containing 4 0.0312527
IQGAP3 IQ motif containing GTPase activating protein 3 0.031024
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0310221
TRAPPC9 trafficking protein particle complex 9 0.0308255
OGA O-GlcNAcase 0.0307911
DIDO1 death inducer-obliterator 1 0.0307024
SMYD3 SET and MYND domain containing 3 0.0305878
ANKRD11 ankyrin repeat domain 11 0.0304849
MARCHF4 membrane associated ring-CH-type finger 4 0.0304168
PGK1 phosphoglycerate kinase 1 0.0300993
DCAF8 DDB1 and CUL4 associated factor 8 0.0300082
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0299626
ARID1A AT rich interactive domain 1A (SWI-like) 0.0298821
PRRC2A proline-rich coiled-coil 2A 0.0298255
THADA thyroid adenoma associated 0.0297277
STAT2 signal transducer and activator of transcription 2, 113kDa 0.029696
CENPF centromere protein F, 350/400kDa 0.02966
ANKRD36C ankyrin repeat domain 36C 0.0293034
ZBTB1 zinc finger and BTB domain containing 1 0.0291128
MKI67 marker of proliferation Ki-67 0.0288215
ZNF148 zinc finger protein 148 0.0285852
ZBTB25 zinc finger and BTB domain containing 25 0.0283759
EXOC4 exocyst complex component 4 0.0283337
DENND5B DENN/MADD domain containing 5B 0.0283219
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0283043
ANO6 anoctamin 6 0.0278583
MPRIP myosin phosphatase Rho interacting protein 0.0274782
SETD5 SET domain containing 5 0.0270512
GIGYF2 GRB10 interacting GYF protein 2 0.0270239
SRSF11 serine/arginine-rich splicing factor 11 0.0269242
TMEM41B transmembrane protein 41B 0.0267592
SREBF2 sterol regulatory element binding transcription factor 2 0.0266889
NACA nascent polypeptide-associated complex alpha subunit 0.0265667
PPP1R21 protein phosphatase 1, regulatory subunit 21 0.0263485
KCTD20 potassium channel tetramerization domain containing 20 0.0260677
GSE1 Gse1 coiled-coil protein 0.0260002
MEF2D myocyte enhancer factor 2D 0.0256778
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0256563
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0255926
PHF3 PHD finger protein 3 0.0255357
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0253759
SQSTM1 sequestosome 1 0.0253687
BPTF bromodomain PHD finger transcription factor 0.0250384
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0248283
ANKRD17 ankyrin repeat domain 17 0.0246184

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.252819
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.185969
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.100744
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0908113
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0755642
VIM vimentin -0.0751123
PTMA prothymosin, alpha -0.073656
TMSB10 thymosin beta 10 -0.0700654
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.06547
EGR1 early growth response 1 -0.0575748
MCL1 myeloid cell leukemia 1 -0.0555844
ACTG1 actin gamma 1 -0.0549811
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0532745
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0518063
PRELID2 PRELI domain containing 2 -0.049902
AKAP12 A kinase (PRKA) anchor protein 12 -0.0484414
EXT1 exostosin glycosyltransferase 1 -0.0482373
RYR3 ryanodine receptor 3 -0.0462179
OSMR oncostatin M receptor -0.0450332
POTEF POTE ankyrin domain family, member F -0.0445471
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.042548
MORF4L2 mortality factor 4 like 2 -0.0409048
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0404564
TM4SF1 transmembrane 4 L six family member 1 -0.0402684
HMGA2 high mobility group AT-hook 2 -0.0401497
TRA2A transformer 2 alpha homolog (Drosophila) -0.0397681
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.039371
CANX calnexin -0.0388148
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0381541
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0380542
FMNL2 formin-like 2 -0.0379839
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0378236
TPM4 tropomyosin 4 -0.0376481
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0369929
PDLIM5 PDZ and LIM domain 5 -0.0364206
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0362865
RAB7A RAB7A, member RAS oncogene family -0.0359033
RPS21 ribosomal protein S21 -0.0345265
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0344873
JUN jun proto-oncogene -0.0341185
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0335084
YBX3 Y box binding protein 3 -0.0328052
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0327905
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0326578
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0320562
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0315819
VCL vinculin -0.0312484
VDAC1 voltage-dependent anion channel 1 -0.0310481
RSRC2 arginine/serine-rich coiled-coil 2 -0.0309598
IER3 immediate early response 3 -0.030365
SRP72 signal recognition particle 72kDa -0.0302947
GNAS GNAS complex locus -0.0300366
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0299964
STC1 stanniocalcin 1 -0.0293965
S100A10 S100 calcium binding protein A10 -0.0292669
RBM39 RNA binding motif protein 39 -0.0289475
TFPI2 tissue factor pathway inhibitor 2 -0.0286293
INTS6 integrator complex subunit 6 -0.0284413
AFF3 AF4/FMR2 family, member 3 -0.0280667
MT2A metallothionein 2A -0.028055
DIAPH2 diaphanous-related formin 2 -0.0278323
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0274044
KDM3A lysine (K)-specific demethylase 3A -0.027368
AEBP2 AE binding protein 2 -0.0268888
NCOA7 nuclear receptor coactivator 7 -0.0268498
ATXN1 ataxin 1 -0.0265583
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.026333
KLF6 Kruppel-like factor 6 -0.0263084
RAB1A RAB1A, member RAS oncogene family -0.0261773
S100A11 S100 calcium binding protein A11 -0.0257846
NEK10 NIMA-related kinase 10 -0.0257086
CCNL1 cyclin L1 -0.0255108
HSPH1 heat shock 105kDa/110kDa protein 1 -0.02545
LMAN1 lectin, mannose-binding, 1 -0.0241418
CDK17 cyclin-dependent kinase 17 -0.0239176
RPS24 ribosomal protein S24 -0.0238972
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0238564
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0237275
CALD1 caldesmon 1 -0.0235282
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0233921
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0230589
WNT2B wingless-type MMTV integration site family, member 2B -0.0225755
RPS8 ribosomal protein S8 -0.0225592
ZNF207 zinc finger protein 207 -0.0223274
RPL35A ribosomal protein L35a -0.0220088
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.0217196
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0216507
RPL38 ribosomal protein L38 -0.0213146
RPL32 ribosomal protein L32 -0.0211257
CAMTA1 calmodulin binding transcription activator 1 -0.0210793
NF1 neurofibromin 1 -0.0210577
RPS29 ribosomal protein S29 -0.0209306
SEPTIN7 septin 7 -0.0208401
FSCN1 fascin actin-bundling protein 1 -0.0208316
CRY1 cryptochrome circadian clock 1 -0.020523
ARF4 ADP-ribosylation factor 4 -0.0203376
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0203014
RPS19 ribosomal protein S19 -0.0202972
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0202494
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0200461