Cabozantinib (S-malate)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZNF292 zinc finger protein 292 0.0857923
PGK1 phosphoglycerate kinase 1 0.0802596
CD109 CD109 molecule 0.0772672
GOLGA4 golgin A4 0.0717375
SNAP25 synaptosomal-associated protein, 25kDa 0.0695404
NAMPT nicotinamide phosphoribosyltransferase 0.0681408
MYH9 myosin, heavy chain 9, non-muscle 0.0635286
DSCAM Down syndrome cell adhesion molecule 0.0617661
SOD2 superoxide dismutase 2, mitochondrial 0.0609651
NAV2 neuron navigator 2 0.0556945
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0516298
RBM39 RNA binding motif protein 39 0.0453444
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0452806
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0441334
ANKRD28 ankyrin repeat domain 28 0.0437778
XPO1 exportin 1 0.0413524
FNDC3B fibronectin type III domain containing 3B 0.0397325
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0394206
YEATS2 YEATS domain containing 2 0.0383726
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0368343
DPYSL3 dihydropyrimidinase-like 3 0.0367659
MMP2 matrix metallopeptidase 2 0.0364197
CALD1 caldesmon 1 0.0362165
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0361528
RB1CC1 RB1-inducible coiled-coil 1 0.035921
OGA O-GlcNAcase 0.0357686
FBXO32 F-box protein 32 0.0351229
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0348393
EEF2 eukaryotic translation elongation factor 2 0.0338256
TFG TRK-fused gene 0.0332397
TRA2A transformer 2 alpha homolog (Drosophila) 0.0321044
SRRM2 serine/arginine repetitive matrix 2 0.0314706
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0314673
FNIP1 folliculin interacting protein 1 0.0313199
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0311468
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0309506
ZNF148 zinc finger protein 148 0.0304965
RNF145 ring finger protein 145 0.0303465
MBNL1 muscleblind-like splicing regulator 1 0.0303465
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0300898
FAM13A family with sequence similarity 13, member A 0.0298995
HELZ helicase with zinc finger 0.0297765
ELL2 elongation factor, RNA polymerase II, 2 0.0296629
TNRC6A trinucleotide repeat containing 6A 0.0290501
RAD21 RAD21 homolog (S. pombe) 0.0290376
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0289336
PHF3 PHD finger protein 3 0.0289116
INSIG2 insulin induced gene 2 0.0283829
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0280802
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0279517
YTHDC1 YTH domain containing 1 0.0277519
NUP58 nucleoporin 58 0.0275929
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0275721
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0274856
PHF21A PHD finger protein 21A 0.0274768
NUMA1 nuclear mitotic apparatus protein 1 0.0274299
AHR aryl hydrocarbon receptor 0.0273544
DPYD dihydropyrimidine dehydrogenase 0.027278
SETD5 SET domain containing 5 0.0272777
CENPF centromere protein F, 350/400kDa 0.0271053
ANKRD11 ankyrin repeat domain 11 0.0269023
PRKCSH protein kinase C substrate 80K-H 0.026765
ELP2 elongator acetyltransferase complex subunit 2 0.026692
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0266754
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 0.0265715
KMT2E lysine (K)-specific methyltransferase 2E 0.0263432
RPS6 ribosomal protein S6 0.0262847
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0261873
LOC112694756 uncharaterized LOC112694756 0.0260699
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0260629
HMGB2 high mobility group box 2 0.0259325
USP9X ubiquitin specific peptidase 9, X-linked 0.0258388
NCAM1 neural cell adhesion molecule 1 0.0257701
WAC WW domain containing adaptor with coiled-coil 0.0257497
SMC4 structural maintenance of chromosomes 4 0.0257015
FXR1 fragile X mental retardation, autosomal homolog 1 0.0256875
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.025626
PCBP2 poly(rC) binding protein 2 0.025561
CDK19 cyclin-dependent kinase 19 0.0253791
PRRC2C proline-rich coiled-coil 2C 0.0248776
AKAP9 A kinase (PRKA) anchor protein 9 0.024675
ATOSA atos homolog A 0.0246549
ESYT2 extended synaptotagmin-like protein 2 0.0246268
TP53BP1 tumor protein p53 binding protein 1 0.0246193
NPTN neuroplastin 0.024496
DENND4C DENN/MADD domain containing 4C 0.0241791
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0239125
RLIM ring finger protein, LIM domain interacting 0.0238929
GLS2 glutaminase 2 (liver, mitochondrial) 0.0237912
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0230736
MCTP2 multiple C2 domains, transmembrane 2 0.0230476
PPME1 protein phosphatase methylesterase 1 0.0230152
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0230029
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0229909
PUM2 pumilio RNA-binding family member 2 0.0229578
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0228825
MATR3 matrin 3 0.0228339
ANKRD17 ankyrin repeat domain 17 0.0228202
AVL9 AVL9 homolog (S. cerevisiase) 0.0227654
RPL13A ribosomal protein L13a 0.0227266

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.244467
TIMP3 TIMP metallopeptidase inhibitor 3 -0.134204
COL1A2 collagen, type I, alpha 2 -0.131118
VIM vimentin -0.128576
COL1A1 collagen, type I, alpha 1 -0.104543
STC1 stanniocalcin 1 -0.0994334
PSD3 pleckstrin and Sec7 domain containing 3 -0.0949795
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0803341
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0752599
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0676076
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0673043
NDRG1 N-myc downstream regulated 1 -0.0651893
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0651808
NAV1 neuron navigator 1 -0.0632896
FTL ferritin, light polypeptide -0.0607918
HLA-B major histocompatibility complex, class I, B -0.0603207
ASPH aspartate beta-hydroxylase -0.0588085
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0561325
COL5A1 collagen, type V, alpha 1 -0.0557425
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0556823
IER3 immediate early response 3 -0.0526504
IGFBP3 insulin-like growth factor binding protein 3 -0.0519908
CD44 CD44 molecule (Indian blood group) -0.0518505
TFPI2 tissue factor pathway inhibitor 2 -0.0514101
EXT1 exostosin glycosyltransferase 1 -0.0511313
APCDD1L adenomatosis polyposis coli down-regulated 1-like -0.0511159
FRMD4A FERM domain containing 4A -0.0506825
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0495972
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0477872
IFI6 interferon, alpha-inducible protein 6 -0.0464318
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0459264
CDH13 cadherin 13 -0.0456237
ZEB1 zinc finger E-box binding homeobox 1 -0.0454697
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0451151
GLIS3 GLIS family zinc finger 3 -0.0441821
INHBA inhibin, beta A -0.0425785
TGFBI transforming growth factor, beta-induced, 68kDa -0.0419786
MTSS1 metastasis suppressor 1 -0.0395124
SLIT2 slit homolog 2 (Drosophila) -0.0382483
IL1B interleukin 1, beta -0.0378549
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0372408
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0364214
HPCAL1 hippocalcin-like 1 -0.0359502
LOXL2 lysyl oxidase-like 2 -0.0354343
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0351312
ANGPTL4 angiopoietin-like 4 -0.0351188
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0346218
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0337748
AKAP12 A kinase (PRKA) anchor protein 12 -0.0335158
PTMA prothymosin, alpha -0.032852
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0326273
F3 coagulation factor III (thromboplastin, tissue factor) -0.032399
COL5A3 collagen, type V, alpha 3 -0.0323243
RRBP1 ribosome binding protein 1 -0.0312041
FAM20C family with sequence similarity 20, member C -0.0305897
EGR1 early growth response 1 -0.0305105
COL6A2 collagen, type VI, alpha 2 -0.030377
HMGA2 high mobility group AT-hook 2 -0.0301276
PTPRG protein tyrosine phosphatase, receptor type, G -0.0296316
TPT1 tumor protein, translationally-controlled 1 -0.0286448
EML5 echinoderm microtubule associated protein like 5 -0.0285429
LOC102724023 ES1 protein homolog, mitochondrial -0.0281344
MAML3 mastermind-like 3 (Drosophila) -0.0279045
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0275851
VCL vinculin -0.0275842
IGFBP5 insulin-like growth factor binding protein 5 -0.027114
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0270373
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) -0.0268861
TMSB10 thymosin beta 10 -0.0267812
MAP1B microtubule-associated protein 1B -0.0266856
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0263922
TPM4 tropomyosin 4 -0.0263828
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0263211
HM13 histocompatibility (minor) 13 -0.0261483
TMEM178B transmembrane protein 178B -0.0259572
ENO1 enolase 1, (alpha) -0.0253851
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0253537
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0250092
ARL4C ADP-ribosylation factor-like 4C -0.0249456
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0249441
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0243786
CAVIN1 caveolae associated protein 1 -0.0238167
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0233906
S100A10 S100 calcium binding protein A10 -0.0229533
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0228108
CLMP CXADR-like membrane protein -0.0225444
SP100 SP100 nuclear antigen -0.0224951
JARID2 jumonji, AT rich interactive domain 2 -0.0223852
TGFB1 transforming growth factor, beta 1 -0.0220176
PCBP3 poly(rC) binding protein 3 -0.0219182
COL6A1 collagen, type VI, alpha 1 -0.0214819
CCND1 cyclin D1 -0.0214717
ZHX2 zinc fingers and homeoboxes 2 -0.0210892
RAI14 retinoic acid induced 14 -0.0210637
S100A6 S100 calcium binding protein A6 -0.0207081
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0206599
ECE1 endothelin converting enzyme 1 -0.0204339
INTS6 integrator complex subunit 6 -0.0203594
NT5E 5'-nucleotidase, ecto (CD73) -0.0202507
ZFAND3 zinc finger, AN1-type domain 3 -0.0201993