Cabozantinib (S-malate)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4B phosphodiesterase 4B, cAMP-specific 0.145001
HDAC9 histone deacetylase 9 0.127309
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.116534
SAMD4A sterile alpha motif domain containing 4A 0.111239
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0989902
PDE4D phosphodiesterase 4D, cAMP-specific 0.0926802
PDGFC platelet derived growth factor C 0.0905257
SSBP2 single-stranded DNA binding protein 2 0.0888871
NBEA neurobeachin 0.0763389
EFNA5 ephrin-A5 0.0760164
LPP LIM domain containing preferred translocation partner in lipoma 0.0759241
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0741554
SRRM2 serine/arginine repetitive matrix 2 0.0729943
NFIA nuclear factor I/A 0.0723566
PYGB phosphorylase, glycogen; brain 0.0682175
DSCAM Down syndrome cell adhesion molecule 0.0676476
EXT1 exostosin glycosyltransferase 1 0.0631389
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0628601
ACTG1 actin gamma 1 0.0586889
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0567242
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0561979
FOXP1 forkhead box P1 0.0545256
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0540132
SMYD3 SET and MYND domain containing 3 0.0518986
HSPA8 heat shock 70kDa protein 8 0.0516438
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0511679
RBM39 RNA binding motif protein 39 0.0510936
ZNF292 zinc finger protein 292 0.0503837
ANKRD11 ankyrin repeat domain 11 0.0481391
EIF1 eukaryotic translation initiation factor 1 0.0477771
ANK2 ankyrin 2, neuronal 0.0476519
TMSB4X thymosin beta 4, X-linked 0.0475157
EML4 echinoderm microtubule associated protein like 4 0.0464933
EGFR epidermal growth factor receptor 0.0464213
ZEB1 zinc finger E-box binding homeobox 1 0.0455816
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0445029
ADAM9 ADAM metallopeptidase domain 9 0.0438733
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0436363
RNF145 ring finger protein 145 0.0422915
MSI2 musashi RNA-binding protein 2 0.0416298
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0415835
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0413026
CAMTA1 calmodulin binding transcription activator 1 0.041268
KMT2E lysine (K)-specific methyltransferase 2E 0.0406722
NAP1L1 nucleosome assembly protein 1-like 1 0.0404267
MBNL2 muscleblind-like splicing regulator 2 0.039957
PRRC2C proline-rich coiled-coil 2C 0.0398643
ZFAND3 zinc finger, AN1-type domain 3 0.039434
RPL4 ribosomal protein L4 0.0393118
ZNF608 zinc finger protein 608 0.0381349
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0368093
RTN4 reticulon 4 0.0362121
GARS1 glycyl-tRNA synthetase 1 0.0359629
CREB5 cAMP responsive element binding protein 5 0.0359487
ZBTB20 zinc finger and BTB domain containing 20 0.0350456
SLC38A2 solute carrier family 38, member 2 0.0339022
PNISR PNN-interacting serine/arginine-rich protein 0.0337591
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0335115
PER1 period circadian clock 1 0.0334534
IGF1R insulin-like growth factor 1 receptor 0.0326746
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0317917
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0317136
JMJD1C jumonji domain containing 1C 0.0315521
EIF4B eukaryotic translation initiation factor 4B 0.0314797
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0314211
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0313932
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0312057
NAMPT nicotinamide phosphoribosyltransferase 0.0305185
PDE10A phosphodiesterase 10A 0.0304435
COG5 component of oligomeric golgi complex 5 0.0300146
CLIP1 CAP-GLY domain containing linker protein 1 0.0298284
NCKAP1 NCK-associated protein 1 0.0296617
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0296553
PRPF38B pre-mRNA processing factor 38B 0.0292505
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0282129
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0280915
RAB27B RAB27B, member RAS oncogene family 0.0280552
GPHN gephyrin 0.0280488
ANKRD17 ankyrin repeat domain 17 0.0279558
KDM3A lysine (K)-specific demethylase 3A 0.0278184
GSE1 Gse1 coiled-coil protein 0.0273074
TRERF1 transcriptional regulating factor 1 0.0272772
PLCE1 phospholipase C, epsilon 1 0.0271682
FNDC3B fibronectin type III domain containing 3B 0.0267414
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0267143
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0265637
TRIO trio Rho guanine nucleotide exchange factor 0.0264824
SREBF2 sterol regulatory element binding transcription factor 2 0.0262609
PTPRG protein tyrosine phosphatase, receptor type, G 0.0262252
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0262229
PGK1 phosphoglycerate kinase 1 0.0261114
NACA nascent polypeptide-associated complex alpha subunit 0.0257962
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0257382
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0254325
KMT2C lysine (K)-specific methyltransferase 2C 0.0251398
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0247491
MED13L mediator complex subunit 13-like 0.024615
ARID1A AT rich interactive domain 1A (SWI-like) 0.0244037
FNBP4 formin binding protein 4 0.0242867
CCNL1 cyclin L1 0.0242689

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.113887
PTMA prothymosin, alpha -0.113293
PKM pyruvate kinase, muscle -0.110626
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0588618
BMP10 bone morphogenetic protein 10 -0.0477865
DLG1 discs, large homolog 1 (Drosophila) -0.0442922
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0431468
S100A6 S100 calcium binding protein A6 -0.0337326
POTEF POTE ankyrin domain family, member F -0.0327314
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0302499
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0298456
RHOA ras homolog family member A -0.0293179
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0280609
MYO5C myosin VC -0.0270925
CCND1 cyclin D1 -0.0269934
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0256407
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0252489
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0244006
HSPB1 heat shock 27kDa protein 1 -0.0241981
PFN1 profilin 1 -0.0238691
MKI67 marker of proliferation Ki-67 -0.0228529
EMP3 epithelial membrane protein 3 -0.0219926
S100A4 S100 calcium binding protein A4 -0.02113
TPM4 tropomyosin 4 -0.0211143
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0210236
GLI3 GLI family zinc finger 3 -0.0203764
LOXL3 lysyl oxidase-like 3 -0.0200994
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0194576
LOC102724023 ES1 protein homolog, mitochondrial -0.0188422
ENO1 enolase 1, (alpha) -0.0185844
TOB1 transducer of ERBB2, 1 -0.0179324
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0174983
FTL ferritin, light polypeptide -0.0172338
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0171529
TUBA1B tubulin, alpha 1b -0.0167984
MYO5A myosin VA (heavy chain 12, myoxin) -0.0162566
SMC4 structural maintenance of chromosomes 4 -0.015993
PRDX2 peroxiredoxin 2 -0.0157518
MYL12B myosin, light chain 12B, regulatory -0.015267
DIAPH3 diaphanous-related formin 3 -0.015252
HJURP Holliday junction recognition protein -0.0152429
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0151389
VDAC1 voltage-dependent anion channel 1 -0.0150217
ARL2BP ADP-ribosylation factor-like 2 binding protein -0.0145938
PRDX1 peroxiredoxin 1 -0.0144216
KPNB1 karyopherin (importin) beta 1 -0.0144155
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0143381
RRM2 ribonucleotide reductase M2 -0.0141813
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0141346
TUBB4B tubulin, beta 4B class IVb -0.0136013
SUZ12 SUZ12 polycomb repressive complex 2 subunit -0.013542
THBD thrombomodulin -0.0135065
FER1L6 fer-1-like family member 6 -0.0134236
CENPE centromere protein E, 312kDa -0.0132551
IFI16 interferon, gamma-inducible protein 16 -0.0132052
NAV2 neuron navigator 2 -0.0131097
CKAP2 cytoskeleton associated protein 2 -0.0128765
RSPRY1 ring finger and SPRY domain containing 1 -0.0128604
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0128349
PLXNA2 plexin A2 -0.0126333
PTMS parathymosin -0.0123012
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0122815
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0122683
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0122366
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0121427
KNL1 kinetochore scaffold 1 -0.01125
ARF4 ADP-ribosylation factor 4 -0.0112119
KIF18B kinesin family member 18B -0.0109106
TPX2 TPX2, microtubule-associated -0.010795
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0107323
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0105976
LDHA lactate dehydrogenase A -0.0105009
DUSP6 dual specificity phosphatase 6 -0.0104631
TMPO thymopoietin -0.0102629
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0101062
TPI1 triosephosphate isomerase 1 -0.0100873
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0100721
LATS2 large tumor suppressor kinase 2 -0.010044
AHNAK AHNAK nucleoprotein -0.010025
IFITM2 interferon induced transmembrane protein 2 -0.00996691
SDK1 sidekick cell adhesion molecule 1 -0.00989384
COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) -0.00982165
SPRY4 sprouty homolog 4 (Drosophila) -0.00980714
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.00977441
RACK1 receptor for activated C kinase 1 -0.0097054
RHOB ras homolog family member B -0.00968814
SMIM44 small integral membrane protein 44 -0.00962612
KLF2 Kruppel-like factor 2 -0.00959637
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0094772
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0094454
TACC3 transforming, acidic coiled-coil containing protein 3 -0.00944438
CBX3 chromobox homolog 3 -0.00939618
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.00938281
HILPDA hypoxia inducible lipid droplet-associated -0.00937926
TRIOBP TRIO and F-actin binding protein -0.00930797
KIAA0232 KIAA0232 -0.00929327
CDC25C cell division cycle 25C -0.0092361
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta -0.00916804
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.00906411
RAB10 RAB10, member RAS oncogene family -0.00903447