Cabozantinib (S-malate)_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cabozantinib (S-malate) perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cabozantinib (S-malate)_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HLA-B major histocompatibility complex, class I, B 0.140357
TENT5A terminal nucleotidyltransferase 5A 0.0632443
ELL2 elongation factor, RNA polymerase II, 2 0.0564581
COL6A3 collagen, type VI, alpha 3 0.0537043
ADM adrenomedullin 0.0521278
NCOR2 nuclear receptor corepressor 2 0.0486918
HLA-A major histocompatibility complex, class I, A 0.0484072
EPS8 epidermal growth factor receptor pathway substrate 8 0.0434356
EPAS1 endothelial PAS domain protein 1 0.0420377
HLA-C major histocompatibility complex, class I, C 0.0400689
LOC112694756 uncharaterized LOC112694756 0.0397287
BBS9 Bardet-Biedl syndrome 9 0.0395615
AOPEP aminopeptidase O (putative) 0.0377621
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0375169
NUMA1 nuclear mitotic apparatus protein 1 0.0373413
GPC6 glypican 6 0.0372947
RNF145 ring finger protein 145 0.0371578
FTL ferritin, light polypeptide 0.0365541
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.035417
FAM13A family with sequence similarity 13, member A 0.0352281
EIF1 eukaryotic translation initiation factor 1 0.0351918
XPO1 exportin 1 0.0346753
RPL35A ribosomal protein L35a 0.0346098
RICTOR RPTOR independent companion of MTOR, complex 2 0.0339769
RAD51B RAD51 paralog B 0.033489
NKD1 naked cuticle homolog 1 (Drosophila) 0.0333049
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0328639
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.0325762
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0324925
FOXJ3 forkhead box J3 0.0323631
SLC38A2 solute carrier family 38, member 2 0.0320394
APP amyloid beta (A4) precursor protein 0.0313186
CELF1 CUGBP, Elav-like family member 1 0.0312388
TENT2 terminal nucleotidyltransferase 2 0.0310726
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0306427
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0304989
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0300668
TRA2A transformer 2 alpha homolog (Drosophila) 0.030019
NAV2 neuron navigator 2 0.029926
MBNL1 muscleblind-like splicing regulator 1 0.0296598
PRELID2 PRELI domain containing 2 0.0295784
MBNL2 muscleblind-like splicing regulator 2 0.0289194
MED15 mediator complex subunit 15 0.0289057
N4BP2L2 NEDD4 binding protein 2-like 2 0.0282302
NRXN3 neurexin 3 0.0282056
PARD3 par-3 family cell polarity regulator 0.0280946
COG5 component of oligomeric golgi complex 5 0.0280344
GSE1 Gse1 coiled-coil protein 0.0280008
ZNF638 zinc finger protein 638 0.0277557
TPT1 tumor protein, translationally-controlled 1 0.0275942
NDRG1 N-myc downstream regulated 1 0.027522
GGT7 gamma-glutamyltransferase 7 0.0274932
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0274804
AHDC1 AT hook, DNA binding motif, containing 1 0.0268966
KIF13A kinesin family member 13A 0.026894
SETD5 SET domain containing 5 0.0268082
DST dystonin 0.0267175
TGFB1 transforming growth factor, beta 1 0.0265774
TBC1D22A TBC1 domain family, member 22A 0.0261975
AFF1 AF4/FMR2 family, member 1 0.0261834
RPL11 ribosomal protein L11 0.0259782
ANKRD17 ankyrin repeat domain 17 0.0259741
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.0258768
SRRM2 serine/arginine repetitive matrix 2 0.025862
RPS19 ribosomal protein S19 0.0257044
SNAP25 synaptosomal-associated protein, 25kDa 0.0256714
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0252408
IGF2R insulin-like growth factor 2 receptor 0.0252205
PGK1 phosphoglycerate kinase 1 0.0251439
VEGFA vascular endothelial growth factor A 0.0251214
PDE4D phosphodiesterase 4D, cAMP-specific 0.0249509
EIF5B eukaryotic translation initiation factor 5B 0.0248261
VMP1 vacuole membrane protein 1 0.0245806
FNIP1 folliculin interacting protein 1 0.0245677
PLEC plectin 0.0244011
ZMIZ1 zinc finger, MIZ-type containing 1 0.0244008
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0243813
NF1 neurofibromin 1 0.024361
FMNL2 formin-like 2 0.0241346
OGA O-GlcNAcase 0.0239092
WDR26 WD repeat domain 26 0.0239027
KIF16B kinesin family member 16B 0.0238644
NAMPT nicotinamide phosphoribosyltransferase 0.0237705
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0237505
ZC3H13 zinc finger CCCH-type containing 13 0.0237187
B2M beta-2-microglobulin 0.0236556
BACE2 beta-site APP-cleaving enzyme 2 0.0235526
RAB6A RAB6A, member RAS oncogene family 0.0235439
KYNU kynureninase 0.0235385
SNX9 sorting nexin 9 0.0234458
EIF4H eukaryotic translation initiation factor 4H 0.0233431
ZBTB20 zinc finger and BTB domain containing 20 0.0232653
MORF4L1 mortality factor 4 like 1 0.0232353
DSCAM Down syndrome cell adhesion molecule 0.0230599
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0229399
NFE2L1 nuclear factor, erythroid 2-like 1 0.0228892
LARS1 leucyl-tRNA synthetase 1 0.0228392
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0227607
ZCCHC7 zinc finger, CCHC domain containing 7 0.0227437
RSL1D1 ribosomal L1 domain containing 1 0.0227019

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.175609
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.1723
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.153186
CXCL8 chemokine (C-X-C motif) ligand 8 -0.143283
FN1 fibronectin 1 -0.11681
ENO1 enolase 1, (alpha) -0.11203
TMSB10 thymosin beta 10 -0.105143
LOX lysyl oxidase -0.0965609
MT2A metallothionein 2A -0.0913957
POTEF POTE ankyrin domain family, member F -0.0888068
FNDC3B fibronectin type III domain containing 3B -0.0840159
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0830533
F3 coagulation factor III (thromboplastin, tissue factor) -0.0812433
LDHA lactate dehydrogenase A -0.0807401
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0770161
UBC ubiquitin C -0.0734409
MAP1B microtubule-associated protein 1B -0.0692474
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0662162
IGFBP3 insulin-like growth factor binding protein 3 -0.0651879
SDC4 syndecan 4 -0.0650742
COL1A2 collagen, type I, alpha 2 -0.0636732
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0634943
CALU calumenin -0.0629987
TPM4 tropomyosin 4 -0.0627363
TRIO trio Rho guanine nucleotide exchange factor -0.0626222
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0617084
CDH13 cadherin 13 -0.0612701
IL6 interleukin 6 -0.0604721
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0589323
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.053479
AHNAK AHNAK nucleoprotein -0.0534697
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0532383
ANXA5 annexin A5 -0.0487349
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0487337
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.047887
SEC31A SEC31 homolog A (S. cerevisiae) -0.0475362
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0469086
SEPTIN7 septin 7 -0.0466611
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0464743
CLTC clathrin, heavy chain (Hc) -0.0463634
CANX calnexin -0.0455498
PTMA prothymosin, alpha -0.0436973
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0431739
SPAG9 sperm associated antigen 9 -0.0428905
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0418633
FAM3C family with sequence similarity 3, member C -0.040935
HMGA2 high mobility group AT-hook 2 -0.0406311
SEC24D SEC24 family member D -0.0404705
VCL vinculin -0.0401215
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0398914
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0389487
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0380558
SEC61G Sec61 gamma subunit -0.0373883
CCNI cyclin I -0.0369725
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0369574
GRB10 growth factor receptor-bound protein 10 -0.0360097
HDLBP high density lipoprotein binding protein -0.035777
SOD2 superoxide dismutase 2, mitochondrial -0.0356554
TXNIP thioredoxin interacting protein -0.0350333
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0346246
JUN jun proto-oncogene -0.0331517
FLNB filamin B, beta -0.0329259
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0326961
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0323529
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0323189
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) -0.0319843
CD44 CD44 molecule (Indian blood group) -0.0317177
ZNF207 zinc finger protein 207 -0.031692
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0316619
STK17A serine/threonine kinase 17a -0.0310132
CDK6 cyclin-dependent kinase 6 -0.0304982
MTPN myotrophin -0.0304897
CALR calreticulin -0.0303674
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0302956
MYO10 myosin X -0.0300781
GNAS GNAS complex locus -0.0298319
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0296615
CENPF centromere protein F, 350/400kDa -0.0290997
TLN1 talin 1 -0.0289153
SEC23A Sec23 homolog A (S. cerevisiae) -0.028855
IARS1 isoleucyl-tRNA synthetase 1 -0.0286687
GLS2 glutaminase 2 (liver, mitochondrial) -0.0284987
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0284328
TUBA1B tubulin, alpha 1b -0.0283915
ECE1 endothelin converting enzyme 1 -0.0283034
WTAP Wilms tumor 1 associated protein -0.027648
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0276148
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0274457
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.02734
PKM pyruvate kinase, muscle -0.0271734
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0269248
PDIA3 protein disulfide isomerase family A, member 3 -0.0265498
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0264113
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0259772
CUL4B cullin 4B -0.0259613
PRSS23 protease, serine, 23 -0.0257277
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0256584
IPO7 importin 7 -0.0256141
PTGES2 prostaglandin E synthase 2 -0.0254873
MSN moesin -0.0254555