Capmatinib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Capmatinib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Capmatinib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.296935
ERBB4 erb-b2 receptor tyrosine kinase 4 0.132717
HSPB1 heat shock 27kDa protein 1 0.131472
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.12297
TENM3 teneurin transmembrane protein 3 0.115569
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0837565
NLGN1 neuroligin 1 0.0836955
CNRIP1 cannabinoid receptor interacting protein 1 0.0775586
ANXA1 annexin A1 0.072896
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0712027
RPS3 ribosomal protein S3 0.0683264
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0612125
HDAC9 histone deacetylase 9 0.0606592
CALR calreticulin 0.0598997
RPS8 ribosomal protein S8 0.0575493
RPS12 ribosomal protein S12 0.0574069
DST dystonin 0.0562189
NEBL nebulette 0.0560058
SYT1 synaptotagmin I 0.0503577
RNF213 ring finger protein 213 0.0482929
FSTL5 follistatin-like 5 0.0478614
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0475737
CDK6 cyclin-dependent kinase 6 0.0474871
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0450949
MGAT4C MGAT4 family, member C 0.0445316
TPI1 triosephosphate isomerase 1 0.043718
LPP LIM domain containing preferred translocation partner in lipoma 0.0437059
MYPN myopalladin 0.0427462
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0423104
CEP112 centrosomal protein 112kDa 0.0407322
CCSER1 coiled-coil serine-rich protein 1 0.0401797
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0393432
NRXN3 neurexin 3 0.0384347
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0374519
PDGFC platelet derived growth factor C 0.0372322
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0366361
LDHA lactate dehydrogenase A 0.035637
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0355251
RPL37A ribosomal protein L37a 0.0353578
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0348721
EPHA5 EPH receptor A5 0.0343808
SERTAD2 SERTA domain containing 2 0.0334058
ZSWIM6 zinc finger, SWIM-type containing 6 0.0321441
RIMS2 regulating synaptic membrane exocytosis 2 0.030624
INTS6 integrator complex subunit 6 0.0305153
FNDC3B fibronectin type III domain containing 3B 0.0302483
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0296368
AXIN2 axin 2 0.0295082
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0286148
CANX calnexin 0.0283762
NBEAL1 neurobeachin-like 1 0.0280706
ADIPOR2 adiponectin receptor 2 0.0276877
EPHA6 EPH receptor A6 0.0273511
MAP4 microtubule-associated protein 4 0.0270652
DPYD dihydropyrimidine dehydrogenase 0.0268166
VCL vinculin 0.0265125
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0256279
NACA nascent polypeptide-associated complex alpha subunit 0.0249749
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0243635
RPS2 ribosomal protein S2 0.024354
MED13L mediator complex subunit 13-like 0.0236068
HLA-B major histocompatibility complex, class I, B 0.0234025
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0229948
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0229547
RSU1 Ras suppressor protein 1 0.0228598
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.02277
CLPTM1L CLPTM1-like 0.0220595
RPL31 ribosomal protein L31 0.021854
FDPS farnesyl diphosphate synthase 0.0214215
CMIP c-Maf inducing protein 0.0211305
TOB1 transducer of ERBB2, 1 0.0209337
SAMD4A sterile alpha motif domain containing 4A 0.0208241
THSD7A thrombospondin, type I, domain containing 7A 0.0207057
S100A10 S100 calcium binding protein A10 0.0205869
DNAH14 dynein, axonemal, heavy chain 14 0.0205232
EXOC6B exocyst complex component 6B 0.0205223
ACLY ATP citrate lyase 0.0205076
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0204348
MPG N-methylpurine-DNA glycosylase 0.0197996
ATP9A ATPase, class II, type 9A 0.0197695
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0196662
NFIB nuclear factor I/B 0.0196628
ANK2 ankyrin 2, neuronal 0.0195738
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0194936
BABAM2 BRISC and BRCA1 A complex member 2 0.019407
RPL26 ribosomal protein L26 0.0193875
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0193549
PTPRF protein tyrosine phosphatase, receptor type, F 0.0191738
TPT1 tumor protein, translationally-controlled 1 0.0191537
PRR16 proline rich 16 0.0189589
PEG10 paternally expressed 10 0.0189103
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0189094
COL5A2 collagen, type V, alpha 2 0.0187183
RBBP6 retinoblastoma binding protein 6 0.0186579
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0184042
JUN jun proto-oncogene 0.0183908
CADM2 cell adhesion molecule 2 0.0183601
FLNA filamin A, alpha 0.0183351
PCDH9 protocadherin 9 0.0183324
EXT1 exostosin glycosyltransferase 1 0.0182554

decreased expression

Symbol Name Standardized Value
AREG amphiregulin -0.293817
TMSB10 thymosin beta 10 -0.130567
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.127373
PCDH7 protocadherin 7 -0.111783
BIRC3 baculoviral IAP repeat containing 3 -0.0998802
VIM vimentin -0.089796
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0864537
PFN1 profilin 1 -0.0831822
SMC4 structural maintenance of chromosomes 4 -0.0822416
MYL12B myosin, light chain 12B, regulatory -0.0792338
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0784853
YBX3 Y box binding protein 3 -0.0696578
ANKRD12 ankyrin repeat domain 12 -0.0668103
NHSL1 NHS-like 1 -0.0656178
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0639017
CCN2 cellular communication network factor 2 -0.0637893
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0603606
YAP1 Yes-associated protein 1 -0.0601879
EGR1 early growth response 1 -0.0562822
TMEM41B transmembrane protein 41B -0.0556892
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0525193
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0521524
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0496226
RRM2 ribonucleotide reductase M2 -0.0475806
IPO7 importin 7 -0.0473475
HMGA1 high mobility group AT-hook 1 -0.0471873
ASPH aspartate beta-hydroxylase -0.0452202
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.043099
EDN1 endothelin 1 -0.0415246
CCNL1 cyclin L1 -0.0402808
MKI67 marker of proliferation Ki-67 -0.0385372
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0380706
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0366479
RPLP0 ribosomal protein, large, P0 -0.0364568
MARCHF4 membrane associated ring-CH-type finger 4 -0.0357648
TUBA1B tubulin, alpha 1b -0.0355995
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0355733
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0353071
RPS21 ribosomal protein S21 -0.0352374
PCBP2 poly(rC) binding protein 2 -0.0347989
RPL35A ribosomal protein L35a -0.0347485
XPO1 exportin 1 -0.0339164
PTMS parathymosin -0.033416
ECT2 epithelial cell transforming 2 -0.0332957
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0324954
GARS1 glycyl-tRNA synthetase 1 -0.032437
RTN4 reticulon 4 -0.0319782
RBM25 RNA binding motif protein 25 -0.0318632
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.030931
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0308933
TM4SF1 transmembrane 4 L six family member 1 -0.0304919
ZBTB20 zinc finger and BTB domain containing 20 -0.0303463
DEK DEK proto-oncogene -0.0300796
TMEM123 transmembrane protein 123 -0.0295487
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0289702
CBX3 chromobox homolog 3 -0.0288194
TRA2B transformer 2 beta homolog (Drosophila) -0.0281641
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0281415
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0277434
RPLP1 ribosomal protein, large, P1 -0.0275115
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0274511
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0273372
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0272495
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0272421
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0270371
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0268505
CDK17 cyclin-dependent kinase 17 -0.0266162
ANKRD28 ankyrin repeat domain 28 -0.0264968
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0262145
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0262003
RPS6 ribosomal protein S6 -0.0261582
ATP5F1B ATP synthase F1 subunit beta -0.0261123
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0257723
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 -0.0257147
POTEF POTE ankyrin domain family, member F -0.025649
ADAM17 ADAM metallopeptidase domain 17 -0.0254573
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0253723
NIPBL Nipped-B homolog (Drosophila) -0.0253537
MIS18BP1 MIS18 binding protein 1 -0.0252416
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0249758
KIF18B kinesin family member 18B -0.0249624
BIRC6 baculoviral IAP repeat containing 6 -0.024939
RB1CC1 RB1-inducible coiled-coil 1 -0.0248967
CEP192 centrosomal protein 192kDa -0.0245809
SLC38A1 solute carrier family 38, member 1 -0.0243877
TBK1 TANK-binding kinase 1 -0.0243239
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0242989
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0239368
WDR43 WD repeat domain 43 -0.023715
TXNRD1 thioredoxin reductase 1 -0.0236973
ETV5 ets variant 5 -0.0236479
CENPF centromere protein F, 350/400kDa -0.0236078
H1-0 H1.0 linker histone -0.0235967
ZNF207 zinc finger protein 207 -0.0235443
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0235016
MATR3 matrin 3 -0.0232765
ATP11A ATPase, class VI, type 11A -0.0230028
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0229469
KIF5B kinesin family member 5B -0.0229455
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0227537