Capmatinib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Capmatinib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Capmatinib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RNF213 ring finger protein 213 0.101375
LCN2 lipocalin 2 0.0941557
EXT1 exostosin glycosyltransferase 1 0.0906575
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0866574
AKAP13 A kinase (PRKA) anchor protein 13 0.0759042
GCLC glutamate-cysteine ligase, catalytic subunit 0.0696627
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0694265
TSC22D1 TSC22 domain family, member 1 0.0676399
INTS6 integrator complex subunit 6 0.0657833
SMAD3 SMAD family member 3 0.065103
DST dystonin 0.057319
PDZD8 PDZ domain containing 8 0.056385
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0545123
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0533585
PLSCR2 phospholipid scramblase 2 0.053163
HKDC1 hexokinase domain containing 1 0.0472631
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0466321
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0461185
LMO7 LIM domain 7 0.0451521
SP100 SP100 nuclear antigen 0.0443182
MX1 MX dynamin-like GTPase 1 0.0372525
LPP LIM domain containing preferred translocation partner in lipoma 0.0363822
KLF5 Kruppel-like factor 5 (intestinal) 0.0359519
VCL vinculin 0.0348418
KYNU kynureninase 0.0347097
MYO5B myosin VB 0.0344781
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.034438
MX2 MX dynamin-like GTPase 2 0.0344336
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0339506
DPP4 dipeptidyl-peptidase 4 0.033887
CATSPERB catsper channel auxiliary subunit beta 0.0309893
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0296076
SERINC5 serine incorporator 5 0.0292803
HSPH1 heat shock 105kDa/110kDa protein 1 0.0291475
ALCAM activated leukocyte cell adhesion molecule 0.0287319
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0283539
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0279049
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0277583
IFNGR1 interferon gamma receptor 1 0.027747
MCU mitochondrial calcium uniporter 0.0277287
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.027181
SIK3 SIK family kinase 3 0.0271614
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0269452
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.026894
APP amyloid beta (A4) precursor protein 0.0258756
YAP1 Yes-associated protein 1 0.0258626
CREBBP CREB binding protein 0.0255879
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0254668
ZSWIM6 zinc finger, SWIM-type containing 6 0.0250287
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0249438
ASPH aspartate beta-hydroxylase 0.02491
TJP1 tight junction protein 1 0.0247647
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0246289
SMYD3 SET and MYND domain containing 3 0.0244398
POF1B premature ovarian failure, 1B 0.0242547
WWOX WW domain containing oxidoreductase 0.0241565
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0239171
CLIP1 CAP-GLY domain containing linker protein 1 0.0238055
PUM1 pumilio RNA-binding family member 1 0.0237921
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0236976
BCL2L1 BCL2-like 1 0.0236633
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0230936
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0224161
TXNRD1 thioredoxin reductase 1 0.022108
LIMA1 LIM domain and actin binding 1 0.0220575
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0219095
ANKRD10 ankyrin repeat domain 10 0.0219068
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0218646
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0218563
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0218251
CLOCK clock circadian regulator 0.0217318
ACTN1 actinin, alpha 1 0.0217236
PDLIM5 PDZ and LIM domain 5 0.0216841
TUFT1 tuftelin 1 0.0214797
MAP7 microtubule-associated protein 7 0.0213232
CTNND1 catenin (cadherin-associated protein), delta 1 0.0213034
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0212594
EEF2 eukaryotic translation elongation factor 2 0.0210416
TMEM65 transmembrane protein 65 0.0208644
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0205057
STAU1 staufen double-stranded RNA binding protein 1 0.0203307
TM9SF2 transmembrane 9 superfamily member 2 0.0200148
ADAM10 ADAM metallopeptidase domain 10 0.0199888
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0196789
JMJD1C jumonji domain containing 1C 0.0196003
SH3RF1 SH3 domain containing ring finger 1 0.0195416
MED13 mediator complex subunit 13 0.0194024
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0193995
KTN1 kinectin 1 (kinesin receptor) 0.0193332
NRIP1 nuclear receptor interacting protein 1 0.0191294
SET SET nuclear proto-oncogene 0.0188157
RPS3 ribosomal protein S3 0.0187338
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0183614
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.0182939
ZNFX1 zinc finger, NFX1-type containing 1 0.0182867
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0178122
USP54 ubiquitin specific peptidase 54 0.0177334
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0177101
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0171537
FTL ferritin, light polypeptide 0.0170722

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.180258
EGR1 early growth response 1 -0.168945
ZMYND8 zinc finger, MYND-type containing 8 -0.160987
B2M beta-2-microglobulin -0.140042
FOS FBJ murine osteosarcoma viral oncogene homolog -0.120764
EZR ezrin -0.117445
H1-0 H1.0 linker histone -0.104054
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0981306
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0954807
NDRG1 N-myc downstream regulated 1 -0.0928978
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0888745
ITGA6 integrin, alpha 6 -0.0872829
PDIA3 protein disulfide isomerase family A, member 3 -0.0844872
GMDS GDP-mannose 4,6-dehydratase -0.0839372
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0825716
SQSTM1 sequestosome 1 -0.0803532
TXNIP thioredoxin interacting protein -0.0769122
ANXA2 annexin A2 -0.076276
PRKCA protein kinase C, alpha -0.0758871
LYZ lysozyme -0.0742211
BTBD9 BTB (POZ) domain containing 9 -0.0738576
LOC102724023 ES1 protein homolog, mitochondrial -0.0714791
RHOBTB3 Rho-related BTB domain containing 3 -0.0714739
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0705826
CCNL1 cyclin L1 -0.0700227
MBNL2 muscleblind-like splicing regulator 2 -0.0696003
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0680048
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.066962
TPT1 tumor protein, translationally-controlled 1 -0.0645762
SREBF2 sterol regulatory element binding transcription factor 2 -0.0639253
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0630876
HLA-B major histocompatibility complex, class I, B -0.062559
LOC112694756 uncharaterized LOC112694756 -0.0624722
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0604965
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0592434
IRF1 interferon regulatory factor 1 -0.0553548
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0547548
ABHD2 abhydrolase domain containing 2 -0.0530053
RAB7A RAB7A, member RAS oncogene family -0.0527894
PTMA prothymosin, alpha -0.0523056
AHI1 Abelson helper integration site 1 -0.0518841
NPSR1 neuropeptide S receptor 1 -0.0514649
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0509155
ITPKC inositol-trisphosphate 3-kinase C -0.0508965
FTH1 ferritin, heavy polypeptide 1 -0.0502064
HLA-E major histocompatibility complex, class I, E -0.047883
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0463496
S100A6 S100 calcium binding protein A6 -0.0455748
BCLAF1 BCL2-associated transcription factor 1 -0.0453929
ABLIM1 actin binding LIM protein 1 -0.0449652
MAML2 mastermind-like 2 (Drosophila) -0.0448001
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.044688
DDIT3 DNA-damage-inducible transcript 3 -0.0443407
WDR45B WD repeat domain 45B -0.0438298
RBM39 RNA binding motif protein 39 -0.0430992
RNF149 ring finger protein 149 -0.0421318
PERP PERP, TP53 apoptosis effector -0.0420745
PTEN phosphatase and tensin homolog -0.0419369
TMPRSS4 transmembrane protease, serine 4 -0.0413453
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.041132
ARHGAP26 Rho GTPase activating protein 26 -0.0406425
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0395929
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0394971
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0393862
PLSCR1 phospholipid scramblase 1 -0.0390191
RUNX1 runt-related transcription factor 1 -0.0387787
PKM pyruvate kinase, muscle -0.0384739
SSH2 slingshot protein phosphatase 2 -0.037856
ATP11A ATPase, class VI, type 11A -0.0378167
IFI27 interferon, alpha-inducible protein 27 -0.0376701
ZFP36L1 ZFP36 ring finger protein-like 1 -0.03737
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0366792
ADIPOR2 adiponectin receptor 2 -0.0365497
ZBTB20 zinc finger and BTB domain containing 20 -0.0365069
AGR2 anterior gradient 2 -0.035913
DYNC2I1 dynein 2 intermediate chain 1 -0.0355892
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0353949
HLA-A major histocompatibility complex, class I, A -0.0351979
FDPS farnesyl diphosphate synthase -0.0351927
SCARB1 scavenger receptor class B, member 1 -0.0351199
SPATA13 spermatogenesis associated 13 -0.0350055
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0348651
PTBP3 polypyrimidine tract binding protein 3 -0.0346336
EIF1 eukaryotic translation initiation factor 1 -0.0345755
GRK3 G protein-coupled receptor kinase 3 -0.0343953
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0343311
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.034331
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0339865
PATJ PATJ crumbs cell polarity complex component -0.0338714
NAMPT nicotinamide phosphoribosyltransferase -0.0338168
ZNF395 zinc finger protein 395 -0.0330241
TNIK TRAF2 and NCK interacting kinase -0.0329362
JUN jun proto-oncogene -0.0328408
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0327673
CD46 CD46 molecule, complement regulatory protein -0.0327655
BLZF1 basic leucine zipper nuclear factor 1 -0.0325883
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0325317
SEC31A SEC31 homolog A (S. cerevisiae) -0.0319537
MXD1 MAX dimerization protein 1 -0.0319125
ESYT2 extended synaptotagmin-like protein 2 -0.031906