Capmatinib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Capmatinib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Capmatinib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.10804
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0904651
IFI6 interferon, alpha-inducible protein 6 0.0833992
PDE10A phosphodiesterase 10A 0.0813175
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0758325
AEBP2 AE binding protein 2 0.0632352
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0593839
HLA-B major histocompatibility complex, class I, B 0.0582794
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0575542
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0546845
RNF213 ring finger protein 213 0.053915
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0537932
WWOX WW domain containing oxidoreductase 0.0513408
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0456184
PRH1 proline-rich protein HaeIII subfamily 1 0.0449701
INTS6 integrator complex subunit 6 0.0416053
ATXN1 ataxin 1 0.0411749
FNDC3B fibronectin type III domain containing 3B 0.040596
RPS4X ribosomal protein S4, X-linked 0.0405322
GOLGB1 golgin B1 0.0401341
SNAP25 synaptosomal-associated protein, 25kDa 0.0389018
IGF1R insulin-like growth factor 1 receptor 0.0378338
DENND5B DENN/MADD domain containing 5B 0.0378098
BMP5 bone morphogenetic protein 5 0.0360878
PRELID2 PRELI domain containing 2 0.0360058
RPS3 ribosomal protein S3 0.0346439
RIMS2 regulating synaptic membrane exocytosis 2 0.0345575
VCL vinculin 0.0338063
PCLO piccolo presynaptic cytomatrix protein 0.0332308
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0331435
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0329201
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.032829
NCOA7 nuclear receptor coactivator 7 0.0327559
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0324325
DST dystonin 0.0317086
ATF6 activating transcription factor 6 0.0312857
MBNL2 muscleblind-like splicing regulator 2 0.0296249
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.0294885
UBAP2L ubiquitin associated protein 2-like 0.0288371
MACROD2 MACRO domain containing 2 0.0286058
BBS9 Bardet-Biedl syndrome 9 0.028112
RPL37A ribosomal protein L37a 0.0280933
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0276775
BPTF bromodomain PHD finger transcription factor 0.0276296
AKAP9 A kinase (PRKA) anchor protein 9 0.0276036
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0271996
RSU1 Ras suppressor protein 1 0.0271147
ZSWIM6 zinc finger, SWIM-type containing 6 0.0268312
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0266607
MBD5 methyl-CpG binding domain protein 5 0.026134
RPS12 ribosomal protein S12 0.025247
SMYD3 SET and MYND domain containing 3 0.0247044
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.024014
TAS2R14 taste receptor, type 2, member 14 0.0237217
DSPP dentin sialophosphoprotein 0.0235491
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0235209
IFIH1 interferon induced with helicase C domain 1 0.0234731
ARID1A AT rich interactive domain 1A (SWI-like) 0.0233795
SIK3 SIK family kinase 3 0.022806
PCNX4 pecanex 4 0.0225999
SFTPA2 surfactant protein A2 0.0224891
LPP LIM domain containing preferred translocation partner in lipoma 0.0224852
SPIDR scaffolding protein involved in DNA repair 0.0224537
CCSER1 coiled-coil serine-rich protein 1 0.0223616
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0221194
SSH2 slingshot protein phosphatase 2 0.0211109
DSCAM Down syndrome cell adhesion molecule 0.0210971
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0209428
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0207343
KIF1A kinesin family member 1A 0.0205754
NEBL nebulette 0.0202609
CALR calreticulin 0.0202368
PCDH7 protocadherin 7 0.0200461
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0199061
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0197061
EFNA1 ephrin-A1 0.0195945
WNT2B wingless-type MMTV integration site family, member 2B 0.0194975
MRTFA myocardin related transcription factor A 0.0193151
ADA adenosine deaminase 0.019287
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0192471
ZBTB1 zinc finger and BTB domain containing 1 0.0191413
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0190833
NRDC nardilysin convertase 0.0190298
MSRB3 methionine sulfoxide reductase B3 0.0189803
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0187273
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0187074
PRKCE protein kinase C, epsilon 0.0185476
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0184249
B2M beta-2-microglobulin 0.0184128
LRP1B low density lipoprotein receptor-related protein 1B 0.0183036
RPS8 ribosomal protein S8 0.0182714
SVIL supervillin 0.0182697
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0181468
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0181447
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0179041
ETV6 ets variant 6 0.017862
MORF4L2 mortality factor 4 like 2 0.0177567
LOXL2 lysyl oxidase-like 2 0.0175874
CTNND1 catenin (cadherin-associated protein), delta 1 0.0175628
HDAC4 histone deacetylase 4 0.0175521

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.223288
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.161307
TFPI2 tissue factor pathway inhibitor 2 -0.128061
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.123871
EGR1 early growth response 1 -0.0985842
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0917858
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0835841
TXNRD1 thioredoxin reductase 1 -0.0818517
RTN4 reticulon 4 -0.0757411
PFN1 profilin 1 -0.0726065
MYL12B myosin, light chain 12B, regulatory -0.0661411
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0655594
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.065052
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0645219
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0636242
PHIP pleckstrin homology domain interacting protein -0.0605507
POTEF POTE ankyrin domain family, member F -0.059172
TMSB10 thymosin beta 10 -0.0585717
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0584532
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0568858
VIM vimentin -0.0533769
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0529198
SMC4 structural maintenance of chromosomes 4 -0.0525671
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0522607
CCNL1 cyclin L1 -0.0497413
CSDE1 cold shock domain containing E1, RNA-binding -0.0491401
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.047265
RPLP0 ribosomal protein, large, P0 -0.0446743
YBX3 Y box binding protein 3 -0.0443519
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0439599
MARCHF4 membrane associated ring-CH-type finger 4 -0.043659
PTMA prothymosin, alpha -0.0436295
CDK17 cyclin-dependent kinase 17 -0.0419864
HMGA1 high mobility group AT-hook 1 -0.0419124
TM4SF1 transmembrane 4 L six family member 1 -0.0416211
KDM2A lysine (K)-specific demethylase 2A -0.0406647
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0404737
LDHB lactate dehydrogenase B -0.0376826
MMP12 matrix metallopeptidase 12 -0.0376755
MIS18BP1 MIS18 binding protein 1 -0.0375978
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0368096
RRM2 ribonucleotide reductase M2 -0.0368061
RUSC2 RUN and SH3 domain containing 2 -0.0365542
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0360243
STC1 stanniocalcin 1 -0.0359629
RB1CC1 RB1-inducible coiled-coil 1 -0.0357826
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0353342
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0351911
TPI1 triosephosphate isomerase 1 -0.0350839
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0350449
EEF2 eukaryotic translation elongation factor 2 -0.0342843
SEPTIN7 septin 7 -0.0327624
PCNX1 pecanex 1 -0.0324574
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.032084
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0320827
THSD4 thrombospondin, type I, domain containing 4 -0.0315892
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0315879
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.031546
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0313363
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0313306
PCBP2 poly(rC) binding protein 2 -0.031244
H1-0 H1.0 linker histone -0.0311323
NABP1 nucleic acid binding protein 1 -0.0311276
DIAPH3 diaphanous-related formin 3 -0.0309701
RBM25 RNA binding motif protein 25 -0.0306945
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0306756
TUBA1B tubulin, alpha 1b -0.030665
XPO1 exportin 1 -0.0305775
CDCP1 CUB domain containing protein 1 -0.030332
RAB7A RAB7A, member RAS oncogene family -0.0302716
ATP5F1B ATP synthase F1 subunit beta -0.0302221
BBX bobby sox homolog (Drosophila) -0.0302094
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.030018
FMNL2 formin-like 2 -0.0298694
TRIO trio Rho guanine nucleotide exchange factor -0.029235
MCL1 myeloid cell leukemia 1 -0.0291549
PGK1 phosphoglycerate kinase 1 -0.0289454
WASF2 WAS protein family, member 2 -0.0289198
SBF2 SET binding factor 2 -0.0287996
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0284295
YBX1 Y box binding protein 1 -0.0283978
MT2A metallothionein 2A -0.0283896
RPS21 ribosomal protein S21 -0.0282406
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0281209
ADAM17 ADAM metallopeptidase domain 17 -0.0276437
OGA O-GlcNAcase -0.0273851
VDAC1 voltage-dependent anion channel 1 -0.0272515
SRPK2 SRSF protein kinase 2 -0.0271566
SNX9 sorting nexin 9 -0.0271413
PPME1 protein phosphatase methylesterase 1 -0.0271335
ACTG1 actin gamma 1 -0.0268728
SINHCAF SIN3-HDAC complex associated factor -0.0268047
KTN1 kinectin 1 (kinesin receptor) -0.0267735
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0265353
GATAD2B GATA zinc finger domain containing 2B -0.0264627
NIPBL Nipped-B homolog (Drosophila) -0.0263466
ADAM9 ADAM metallopeptidase domain 9 -0.0263168
RASA2 RAS p21 protein activator 2 -0.0262644
CENPF centromere protein F, 350/400kDa -0.026204
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E -0.0260719