Capmatinib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Capmatinib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Capmatinib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
WSB1 WD repeat and SOCS box containing 1 0.10999
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0968404
KMT2C lysine (K)-specific methyltransferase 2C 0.0903826
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0804898
ANKRD33B ankyrin repeat domain 33B 0.0798078
CALR calreticulin 0.0720404
PCLO piccolo presynaptic cytomatrix protein 0.0689751
APP amyloid beta (A4) precursor protein 0.0682822
MED13L mediator complex subunit 13-like 0.0609104
NCAM2 neural cell adhesion molecule 2 0.0603956
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.059253
FAF1 Fas (TNFRSF6) associated factor 1 0.059051
PRRC2C proline-rich coiled-coil 2C 0.0582227
ADGRL2 adhesion G protein-coupled receptor L2 0.0575389
FOXP2 forkhead box P2 0.0572454
ZFAND3 zinc finger, AN1-type domain 3 0.0566461
NACA nascent polypeptide-associated complex alpha subunit 0.055151
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.052604
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0520352
PUM2 pumilio RNA-binding family member 2 0.0503114
TPT1 tumor protein, translationally-controlled 1 0.0500579
TAS2R14 taste receptor, type 2, member 14 0.049508
RCOR1 REST corepressor 1 0.0493477
SAMD4A sterile alpha motif domain containing 4A 0.0489691
ZEB2 zinc finger E-box binding homeobox 2 0.0481685
B2M beta-2-microglobulin 0.0474405
FNDC3A fibronectin type III domain containing 3A 0.0460158
NCOA2 nuclear receptor coactivator 2 0.0458108
ZSWIM6 zinc finger, SWIM-type containing 6 0.0450198
DDIT4 DNA-damage-inducible transcript 4 0.044597
COL3A1 collagen, type III, alpha 1 0.0433785
RPL37 ribosomal protein L37 0.0431884
TRA2A transformer 2 alpha homolog (Drosophila) 0.0425248
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0421629
DSCAM Down syndrome cell adhesion molecule 0.0413529
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0410713
ATXN2 ataxin 2 0.0399941
RPL31 ribosomal protein L31 0.0398717
CDC14A cell division cycle 14A 0.0397282
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0394173
GPHN gephyrin 0.039402
TTC28 tetratricopeptide repeat domain 28 0.039384
IFRD1 interferon-related developmental regulator 1 0.0393238
RPS8 ribosomal protein S8 0.0389488
KDM3A lysine (K)-specific demethylase 3A 0.0374921
MARCHF6 membrane associated ring-CH-type finger 6 0.0374736
ISG15 ISG15 ubiquitin-like modifier 0.0372154
PHIP pleckstrin homology domain interacting protein 0.0365169
SQSTM1 sequestosome 1 0.0363882
DENND4A DENN/MADD domain containing 4A 0.0363684
ERRFI1 ERBB receptor feedback inhibitor 1 0.0360751
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.035748
GOLGA4 golgin A4 0.0356802
PARD3B par-3 family cell polarity regulator beta 0.0356273
GLS2 glutaminase 2 (liver, mitochondrial) 0.0353824
RPS12 ribosomal protein S12 0.0351006
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0349329
RPL37A ribosomal protein L37a 0.0348127
MORF4L2 mortality factor 4 like 2 0.0341924
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0340227
AKAP10 A kinase (PRKA) anchor protein 10 0.0339123
C1ORF21 chromosome 1 open reading frame 21 0.0338222
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0336195
ARRDC3 arrestin domain containing 3 0.033451
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0333895
LOC102724023 ES1 protein homolog, mitochondrial 0.0332971
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0332111
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.032992
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0322291
DOCK5 dedicator of cytokinesis 5 0.0322039
RPL9 ribosomal protein L9 0.0321812
FBXO11 F-box protein 11 0.0321256
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.032114
KDM6A lysine (K)-specific demethylase 6A 0.0320006
RPS3 ribosomal protein S3 0.0316351
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0314557
GPBP1 GC-rich promoter binding protein 1 0.031442
RBM20 RNA binding motif protein 20 0.0313001
ITSN2 intersectin 2 0.0311994
MAST2 microtubule associated serine/threonine kinase 2 0.030921
NCOA1 nuclear receptor coactivator 1 0.0305696
SRPK2 SRSF protein kinase 2 0.0304858
RREB1 ras responsive element binding protein 1 0.0303773
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0303246
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0302421
SPAG9 sperm associated antigen 9 0.0301842
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.030174
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0299573
INTS6 integrator complex subunit 6 0.0299197
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.0298037
EIF1 eukaryotic translation initiation factor 1 0.0295088
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0294815
NIPBL Nipped-B homolog (Drosophila) 0.0293138
LIN28B lin-28 homolog B (C. elegans) 0.0292485
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.029092
XPO1 exportin 1 0.0290226
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0289863
OPHN1 oligophrenin 1 0.0289099
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0288014
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.0287267

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.150214
ITGAV integrin, alpha V -0.146423
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.097685
CADM2 cell adhesion molecule 2 -0.0957199
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0873014
POTEF POTE ankyrin domain family, member F -0.080637
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0788512
PFN1 profilin 1 -0.0785267
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0780877
TMSB10 thymosin beta 10 -0.0761437
FNDC3B fibronectin type III domain containing 3B -0.071266
GPC3 glypican 3 -0.0697601
COL11A1 collagen, type XI, alpha 1 -0.0650068
THBS1 thrombospondin 1 -0.062044
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0618824
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0599126
SLIT2 slit homolog 2 (Drosophila) -0.0587928
MKI67 marker of proliferation Ki-67 -0.0566288
TMSB4X thymosin beta 4, X-linked -0.0565219
DST dystonin -0.0557426
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0546651
CENPF centromere protein F, 350/400kDa -0.0534168
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0523007
H1-0 H1.0 linker histone -0.0517463
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0493253
PDIA3 protein disulfide isomerase family A, member 3 -0.0487503
ARHGAP15 Rho GTPase activating protein 15 -0.0485427
CBX3 chromobox homolog 3 -0.0415224
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0414207
SLC38A2 solute carrier family 38, member 2 -0.0402777
EXOC4 exocyst complex component 4 -0.040157
AHNAK AHNAK nucleoprotein -0.0399158
ADAM9 ADAM metallopeptidase domain 9 -0.0382992
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.038289
COTL1 coactosin-like F-actin binding protein 1 -0.037527
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0374748
PEG10 paternally expressed 10 -0.0374033
NTM neurotrimin -0.037268
KPNB1 karyopherin (importin) beta 1 -0.0372168
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0364799
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase -0.0362034
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.03604
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0354855
HMGA1 high mobility group AT-hook 1 -0.0352543
ATP5F1B ATP synthase F1 subunit beta -0.0342611
RAI1 retinoic acid induced 1 -0.034083
RAD51B RAD51 paralog B -0.0340262
CCN2 cellular communication network factor 2 -0.0336504
DEK DEK proto-oncogene -0.033391
SAMD4B sterile alpha motif domain containing 4B -0.0324455
PA2G4 proliferation-associated 2G4, 38kDa -0.0324095
PTMA prothymosin, alpha -0.0315721
MYL12B myosin, light chain 12B, regulatory -0.0313804
TEX11 testis expressed 11 -0.0313258
HMGB1 high mobility group box 1 -0.031182
ANXA5 annexin A5 -0.0301709
LDHB lactate dehydrogenase B -0.0301352
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0299706
SERBP1 SERPINE1 mRNA binding protein 1 -0.029924
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0299086
SHROOM3 shroom family member 3 -0.0298187
BAZ1B bromodomain adjacent to zinc finger domain, 1B -0.0296463
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0291418
SCAF11 SR-related CTD-associated factor 11 -0.0290052
ACTG1 actin gamma 1 -0.0289752
TPM3 tropomyosin 3 -0.0286658
BSG basigin (Ok blood group) -0.0286508
MRPS30 mitochondrial ribosomal protein S30 -0.0286385
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 -0.0286325
ATF7IP activating transcription factor 7 interacting protein -0.0285715
NPAS3 neuronal PAS domain protein 3 -0.028564
UBXN4 UBX domain protein 4 -0.0284718
PDGFC platelet derived growth factor C -0.0280163
DPYD dihydropyrimidine dehydrogenase -0.0275215
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.027416
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0274079
YBX1 Y box binding protein 1 -0.027281
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0268818
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) -0.0265407
CAVIN1 caveolae associated protein 1 -0.0265273
RTN4 reticulon 4 -0.0265137
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0264641
PCBP2 poly(rC) binding protein 2 -0.0262522
HMGA2 high mobility group AT-hook 2 -0.0258832
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B -0.0257586
UPP1 uridine phosphorylase 1 -0.025754
TUBA1B tubulin, alpha 1b -0.0249344
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0249117
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0249004
EMP1 epithelial membrane protein 1 -0.0248377
RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) -0.0248186
WDR43 WD repeat domain 43 -0.0247759
ZNF608 zinc finger protein 608 -0.024768
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0246689
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0246247
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0246002
MAGT1 magnesium transporter 1 -0.0245714
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.024457
SORBS2 sorbin and SH3 domain containing 2 -0.0242133
TPM4 tropomyosin 4 -0.0240759