Capmatinib_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Capmatinib perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Capmatinib_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.0830638
RPS4X ribosomal protein S4, X-linked 0.077355
RPS12 ribosomal protein S12 0.0562621
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0500476
HLA-B major histocompatibility complex, class I, B 0.0423082
RPS3 ribosomal protein S3 0.0388279
ARRDC3 arrestin domain containing 3 0.0384312
RPS2 ribosomal protein S2 0.031793
RPL37A ribosomal protein L37a 0.0316123
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0314495
MORF4L2 mortality factor 4 like 2 0.030924
RPS8 ribosomal protein S8 0.0305963
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0303899
RPL23 ribosomal protein L23 0.0289044
MXI1 MAX interactor 1, dimerization protein 0.0284812
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.026294
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0261133
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0260371
RACK1 receptor for activated C kinase 1 0.0257181
RPL12 ribosomal protein L12 0.0254133
EIF1 eukaryotic translation initiation factor 1 0.0237895
KLF6 Kruppel-like factor 6 0.0237774
RPL26 ribosomal protein L26 0.0237652
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0234192
SFTPA2 surfactant protein A2 0.0232476
B2M beta-2-microglobulin 0.0232476
RPL36 ribosomal protein L36 0.0228321
EZR ezrin 0.0220814
LDHA lactate dehydrogenase A 0.0218773
HSPA8 heat shock 70kDa protein 8 0.021751
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0205078
YBX1 Y box binding protein 1 0.0195426
PRRC2C proline-rich coiled-coil 2C 0.0194481
RPL5 ribosomal protein L5 0.0189598
RPS17 ribosomal protein S17 0.0188925
RPS19 ribosomal protein S19 0.0187336
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0185127
PCLO piccolo presynaptic cytomatrix protein 0.017112
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.01688
SERINC1 serine incorporator 1 0.0167462
SOX9 SRY (sex determining region Y)-box 9 0.0167425
NONO non-POU domain containing, octamer-binding 0.0166814
NACA nascent polypeptide-associated complex alpha subunit 0.0165679
RPS23 ribosomal protein S23 0.0162815
IFI6 interferon, alpha-inducible protein 6 0.016107
DYNLL1 dynein, light chain, LC8-type 1 0.0158045
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0157627
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0155922
IFITM3 interferon induced transmembrane protein 3 0.0155006
GADD45B growth arrest and DNA-damage-inducible, beta 0.0154287
SPAG9 sperm associated antigen 9 0.0152939
ANXA1 annexin A1 0.0152887
RPL11 ribosomal protein L11 0.0150275
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0149568
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0148544
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0147587
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0146747
NAP1L1 nucleosome assembly protein 1-like 1 0.0145985
SQSTM1 sequestosome 1 0.0145934
TPT1 tumor protein, translationally-controlled 1 0.0142145
NDRG1 N-myc downstream regulated 1 0.0141592
RPS29 ribosomal protein S29 0.0140256
RPS6 ribosomal protein S6 0.0140027
SET SET nuclear proto-oncogene 0.0139501
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.01376
APP amyloid beta (A4) precursor protein 0.0136449
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0135526
RPL31 ribosomal protein L31 0.0135281
FLNA filamin A, alpha 0.0133117
RPL9 ribosomal protein L9 0.0130742
ANKRD28 ankyrin repeat domain 28 0.0128452
FTL ferritin, light polypeptide 0.0128235
STAT1 signal transducer and activator of transcription 1, 91kDa 0.012752
MKI67 marker of proliferation Ki-67 0.0127089
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.012249
EIF4A1 eukaryotic translation initiation factor 4A1 0.0121849
RPL38 ribosomal protein L38 0.0121316
RPL14 ribosomal protein L14 0.0121113
CREB5 cAMP responsive element binding protein 5 0.0120254
RPL7 ribosomal protein L7 0.0119295
NFE2L1 nuclear factor, erythroid 2-like 1 0.0117137
DUSP10 dual specificity phosphatase 10 0.0116391
RPL18 ribosomal protein L18 0.0116381
RPL35 ribosomal protein L35 0.0116188
JMJD1C jumonji domain containing 1C 0.0115606
SDC4 syndecan 4 0.0112758
RPL36A ribosomal protein L36a 0.0112584
PAPOLA poly(A) polymerase alpha 0.0111613
IFITM1 interferon induced transmembrane protein 1 0.0111609
RPS27 ribosomal protein S27 0.0111557
SYAP1 synapse associated protein 1 0.0109448
BCL2L1 BCL2-like 1 0.0109058
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0107147
ENO1 enolase 1, (alpha) 0.0106459
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0105721
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.0105349
ATF3 activating transcription factor 3 0.0105224
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0104876
RPL37 ribosomal protein L37 0.0104282
TMF1 TATA element modulatory factor 1 0.0101283

decreased expression

Symbol Name Standardized Value
SOD2 superoxide dismutase 2, mitochondrial -0.229999
FN1 fibronectin 1 -0.224536
FRMD4A FERM domain containing 4A -0.209272
VIM vimentin -0.155086
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.147147
GLIS3 GLIS family zinc finger 3 -0.132187
AKAP12 A kinase (PRKA) anchor protein 12 -0.111378
PDE10A phosphodiesterase 10A -0.10855
CADM1 cell adhesion molecule 1 -0.102069
ZMYND8 zinc finger, MYND-type containing 8 -0.0966509
FNDC3B fibronectin type III domain containing 3B -0.0939443
RAI14 retinoic acid induced 14 -0.0916524
HMGA2 high mobility group AT-hook 2 -0.0906019
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0843662
CDH13 cadherin 13 -0.0810124
DST dystonin -0.0808208
FTH1 ferritin, heavy polypeptide 1 -0.0802465
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0798985
COL6A3 collagen, type VI, alpha 3 -0.0793623
DIAPH2 diaphanous-related formin 2 -0.0787479
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0778338
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0741744
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0686672
VCAN versican -0.0685753
CD44 CD44 molecule (Indian blood group) -0.0680152
IGFBP3 insulin-like growth factor binding protein 3 -0.0678973
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0664555
TNS3 tensin 3 -0.0648267
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0641905
PLIN2 perilipin 2 -0.0630608
TRIO trio Rho guanine nucleotide exchange factor -0.0627304
PGK1 phosphoglycerate kinase 1 -0.0625505
DLG1 discs, large homolog 1 (Drosophila) -0.0620274
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0619421
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0615086
EXT1 exostosin glycosyltransferase 1 -0.0603225
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0598496
FRMPD4 FERM and PDZ domain containing 4 -0.0583031
SDK1 sidekick cell adhesion molecule 1 -0.0558432
NAV1 neuron navigator 1 -0.0546188
ADAM12 ADAM metallopeptidase domain 12 -0.0516567
LPP LIM domain containing preferred translocation partner in lipoma -0.0492605
CTSD cathepsin D -0.0491799
EGR1 early growth response 1 -0.048648
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0480413
PTPRK protein tyrosine phosphatase, receptor type, K -0.0470644
SFRP1 secreted frizzled-related protein 1 -0.0469131
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0454311
VCL vinculin -0.0451061
ZBTB20 zinc finger and BTB domain containing 20 -0.0450673
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0438982
ZFAND3 zinc finger, AN1-type domain 3 -0.0431993
AFF3 AF4/FMR2 family, member 3 -0.0431483
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0427275
MMP12 matrix metallopeptidase 12 -0.0426825
ATXN1 ataxin 1 -0.0424701
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0422566
AHNAK AHNAK nucleoprotein -0.0422388
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.042219
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0421231
MAML2 mastermind-like 2 (Drosophila) -0.0418901
EGFR epidermal growth factor receptor -0.0417567
AFF4 AF4/FMR2 family, member 4 -0.0415656
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0403917
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0399467
QKI QKI, KH domain containing, RNA binding -0.0395443
C3 complement component 3 -0.0390037
PRR16 proline rich 16 -0.0377142
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0367969
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0365004
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0362624
CLMP CXADR-like membrane protein -0.0360981
LOX lysyl oxidase -0.0355724
MACF1 microtubule-actin crosslinking factor 1 -0.0355173
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0354393
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0353671
SMAD3 SMAD family member 3 -0.034926
SOX5 SRY (sex determining region Y)-box 5 -0.0347555
TPM4 tropomyosin 4 -0.0338359
BNC2 basonuclin 2 -0.0337064
TENM2 teneurin transmembrane protein 2 -0.0336168
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0335842
SLC35F3 solute carrier family 35, member F3 -0.0333968
VEGFA vascular endothelial growth factor A -0.0325975
PSD3 pleckstrin and Sec7 domain containing 3 -0.0324142
EFNA5 ephrin-A5 -0.0324022
LRRC7 leucine rich repeat containing 7 -0.0321865
COL8A1 collagen, type VIII, alpha 1 -0.0316161
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0316094
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0314208
BICC1 BicC family RNA binding protein 1 -0.0313748
SBF2 SET binding factor 2 -0.0312872
TPM1 tropomyosin 1 (alpha) -0.0312683
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0312238
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0310733
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0305412
RAD51B RAD51 paralog B -0.0303377
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0300736
UGCG UDP-glucose ceramide glucosyltransferase -0.02962
COL1A2 collagen, type I, alpha 2 -0.0295705