Carbamazepine_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbamazepine perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbamazepine_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LOXL2 lysyl oxidase-like 2 0.189335
AKAP12 A kinase (PRKA) anchor protein 12 0.12912
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.128775
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.110946
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0777326
SOD2 superoxide dismutase 2, mitochondrial 0.0770204
COL3A1 collagen, type III, alpha 1 0.0746902
OGA O-GlcNAcase 0.0720748
MYH9 myosin, heavy chain 9, non-muscle 0.0712841
CALR calreticulin 0.0702104
TRIO trio Rho guanine nucleotide exchange factor 0.0675388
FBN1 fibrillin 1 0.0638718
VIM vimentin 0.062832
FLNB filamin B, beta 0.0599653
APP amyloid beta (A4) precursor protein 0.0597091
TNIP1 TNFAIP3 interacting protein 1 0.0596476
SEPTIN9 septin 9 0.0552204
PLAT plasminogen activator, tissue 0.0539807
DLG1 discs, large homolog 1 (Drosophila) 0.0492953
THBS2 thrombospondin 2 0.0490763
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0483349
NAV2 neuron navigator 2 0.0454057
BHLHE40 basic helix-loop-helix family, member e40 0.0444432
FLNA filamin A, alpha 0.0427605
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0427233
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0426779
SBF2 SET binding factor 2 0.0424558
NFE2L1 nuclear factor, erythroid 2-like 1 0.0416835
CANX calnexin 0.0406788
ATP13A3 ATPase type 13A3 0.0396757
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0392775
KDM3A lysine (K)-specific demethylase 3A 0.0376563
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0372926
IQGAP1 IQ motif containing GTPase activating protein 1 0.0367323
CTSB cathepsin B 0.0362747
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0347123
COL5A2 collagen, type V, alpha 2 0.0343249
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0340377
MSI2 musashi RNA-binding protein 2 0.0339934
HLA-E major histocompatibility complex, class I, E 0.0339515
FNBP4 formin binding protein 4 0.0336984
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0329486
AUTS2 autism susceptibility candidate 2 0.0323164
PTMA prothymosin, alpha 0.031824
ZEB1 zinc finger E-box binding homeobox 1 0.031549
BACE2 beta-site APP-cleaving enzyme 2 0.0312702
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0305325
TMSB4X thymosin beta 4, X-linked 0.0301883
WDFY1 WD repeat and FYVE domain containing 1 0.0299192
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0294834
DPYSL3 dihydropyrimidinase-like 3 0.0294191
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0291011
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0284568
PFKP phosphofructokinase, platelet 0.0278562
GOLGA4 golgin A4 0.0276649
ARRDC3 arrestin domain containing 3 0.027418
YEATS2 YEATS domain containing 2 0.0271042
FNIP1 folliculin interacting protein 1 0.0270332
PLEC plectin 0.0268087
SLC39A11 solute carrier family 39, member 11 0.0263828
HDLBP high density lipoprotein binding protein 0.0262893
DDIT4 DNA-damage-inducible transcript 4 0.0262707
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 0.026202
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0262009
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0254676
C1D C1D nuclear receptor corepressor 0.0254585
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0250708
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0248762
OPTN optineurin 0.0246267
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0244325
STK10 serine/threonine kinase 10 0.0242625
MARCHF6 membrane associated ring-CH-type finger 6 0.0242247
MBNL2 muscleblind-like splicing regulator 2 0.0241514
SFTPA2 surfactant protein A2 0.0240976
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.023736
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0235928
LASP1 LIM and SH3 protein 1 0.022767
SLC22A23 solute carrier family 22, member 23 0.0226126
CD109 CD109 molecule 0.0224717
CLIP2 CAP-GLY domain containing linker protein 2 0.0223928
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 0.0217818
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0216639
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0215847
AFDN afadin, adherens junction formation factor 0.0215823
L1CAM L1 cell adhesion molecule 0.0214254
ESYT2 extended synaptotagmin-like protein 2 0.0213672
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0213447
SQSTM1 sequestosome 1 0.0212299
SH3BP2 SH3-domain binding protein 2 0.0212189
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0210624
HIP1 huntingtin interacting protein 1 0.020953
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0208676
NCOR2 nuclear receptor corepressor 2 0.0208283
FAM219A family with sequence similarity 219, member A 0.0208006
SOX9 SRY (sex determining region Y)-box 9 0.0207274
ACTN4 actinin, alpha 4 0.0206296
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.020367
TTC3 tetratricopeptide repeat domain 3 0.020301
ADAM19 ADAM metallopeptidase domain 19 0.0202032
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0200394

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.209862
TMSB10 thymosin beta 10 -0.111433
NAV1 neuron navigator 1 -0.0773752
S100A10 S100 calcium binding protein A10 -0.074282
MAP1B microtubule-associated protein 1B -0.0733699
MT2A metallothionein 2A -0.0682685
POTEF POTE ankyrin domain family, member F -0.0680373
LOX lysyl oxidase -0.0651151
SAMD9 sterile alpha motif domain containing 9 -0.0576511
CD44 CD44 molecule (Indian blood group) -0.0574856
IGFBP3 insulin-like growth factor binding protein 3 -0.0555862
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0514778
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.051332
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0501129
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.047473
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0473633
CDH13 cadherin 13 -0.0472334
B2M beta-2-microglobulin -0.0451608
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0449233
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0442635
SUCNR1 succinate receptor 1 -0.0439493
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0402037
IFITM3 interferon induced transmembrane protein 3 -0.0398934
PRSS23 protease, serine, 23 -0.0394096
RIGI RNA sensor RIG-I -0.0383063
FN1 fibronectin 1 -0.0374032
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0372849
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0367503
MX2 MX dynamin-like GTPase 2 -0.0367224
HSPB1 heat shock 27kDa protein 1 -0.0349859
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0343594
EXT1 exostosin glycosyltransferase 1 -0.0341836
HLA-B major histocompatibility complex, class I, B -0.033527
PFN1 profilin 1 -0.0315729
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0312326
SP100 SP100 nuclear antigen -0.0302737
ISG15 ISG15 ubiquitin-like modifier -0.0299308
FTL ferritin, light polypeptide -0.0293255
IFITM1 interferon induced transmembrane protein 1 -0.0286829
CSTB cystatin B (stefin B) -0.02862
ACTG1 actin gamma 1 -0.0274895
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0272872
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0266773
S100A6 S100 calcium binding protein A6 -0.0252615
ASPH aspartate beta-hydroxylase -0.0252504
ABI3BP ABI family, member 3 (NESH) binding protein -0.0250126
RPL28 ribosomal protein L28 -0.0249629
IFI16 interferon, gamma-inducible protein 16 -0.0247216
COL8A1 collagen, type VIII, alpha 1 -0.024521
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0244692
DIAPH3 diaphanous-related formin 3 -0.0241171
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0235372
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0229836
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.02265
HMGB1 high mobility group box 1 -0.0226461
SMC4 structural maintenance of chromosomes 4 -0.0221709
PLXNA2 plexin A2 -0.0220082
PKM pyruvate kinase, muscle -0.0216898
CDK6 cyclin-dependent kinase 6 -0.0214942
IFI6 interferon, alpha-inducible protein 6 -0.0207942
MEIS2 Meis homeobox 2 -0.0205664
SEPTIN7 septin 7 -0.0204248
EFNA5 ephrin-A5 -0.0203281
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0200376
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0200203
IFIH1 interferon induced with helicase C domain 1 -0.0199427
S100A11 S100 calcium binding protein A11 -0.0198738
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0196886
RPS6 ribosomal protein S6 -0.0195089
SAMD9L sterile alpha motif domain containing 9-like -0.0194856
SORBS2 sorbin and SH3 domain containing 2 -0.019315
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0192041
ANXA2 annexin A2 -0.0191954
FNDC3A fibronectin type III domain containing 3A -0.0190333
RTN4 reticulon 4 -0.0190278
RRM2 ribonucleotide reductase M2 -0.0188319
SH3KBP1 SH3-domain kinase binding protein 1 -0.0186674
NEK7 NIMA-related kinase 7 -0.0185
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.018457
IL7R interleukin 7 receptor -0.0182946
OASL 2'-5'-oligoadenylate synthetase-like -0.0179505
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0174411
PMP22 peripheral myelin protein 22 -0.0172846
VCL vinculin -0.0171241
GLIS3 GLIS family zinc finger 3 -0.0170868
MBNL1 muscleblind-like splicing regulator 1 -0.0170468
PDE4D phosphodiesterase 4D, cAMP-specific -0.0168739
WARS1 tryptophanyl-tRNA synthetase 1 -0.0165507
RASAL2 RAS protein activator like 2 -0.0165325
OSMR oncostatin M receptor -0.0162497
RPL35A ribosomal protein L35a -0.0161841
CAV1 caveolin 1, caveolae protein, 22kDa -0.0161808
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.0158034
CKAP4 cytoskeleton-associated protein 4 -0.0156388
SEC61G Sec61 gamma subunit -0.0154991
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0154059
MKI67 marker of proliferation Ki-67 -0.0153813
CENPF centromere protein F, 350/400kDa -0.015376
VDAC1 voltage-dependent anion channel 1 -0.0153196
HLA-C major histocompatibility complex, class I, C -0.0152307