Carbamazepine_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbamazepine perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbamazepine_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.393789
MYH9 myosin, heavy chain 9, non-muscle 0.20467
LOXL2 lysyl oxidase-like 2 0.152885
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.134181
CALR calreticulin 0.113369
CXCL8 chemokine (C-X-C motif) ligand 8 0.102234
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0857766
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0833232
PLEC plectin 0.0823848
VIM vimentin 0.0732052
SOD2 superoxide dismutase 2, mitochondrial 0.0710736
VEGFA vascular endothelial growth factor A 0.0661677
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0650748
COL6A3 collagen, type VI, alpha 3 0.0638934
SMAD3 SMAD family member 3 0.0560367
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0544101
FLNA filamin A, alpha 0.0497962
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0481247
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0479147
TNIP1 TNFAIP3 interacting protein 1 0.0460033
EEF2 eukaryotic translation elongation factor 2 0.0440366
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0432676
RPL7 ribosomal protein L7 0.0421628
BHLHE40 basic helix-loop-helix family, member e40 0.0421151
ERRFI1 ERBB receptor feedback inhibitor 1 0.0411809
TRIO trio Rho guanine nucleotide exchange factor 0.0401733
APP amyloid beta (A4) precursor protein 0.0396111
ICAM1 intercellular adhesion molecule 1 0.0392513
ARRDC3 arrestin domain containing 3 0.0374318
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0356472
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0343234
ACTN4 actinin, alpha 4 0.0329667
MSN moesin 0.0328294
HYOU1 hypoxia up-regulated 1 0.032761
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0317608
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0309323
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0305568
RPL19 ribosomal protein L19 0.0295732
HSPA8 heat shock 70kDa protein 8 0.0291619
EEF1G eukaryotic translation elongation factor 1 gamma 0.0289384
NFE2L1 nuclear factor, erythroid 2-like 1 0.027188
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0269715
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.026727
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.0266912
SHB Src homology 2 domain containing adaptor protein B 0.0263392
ECE1 endothelin converting enzyme 1 0.0260211
IGFBP3 insulin-like growth factor binding protein 3 0.0252723
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0248535
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0247984
TMSB4X thymosin beta 4, X-linked 0.0246227
ENO1 enolase 1, (alpha) 0.0240459
POSTN periostin, osteoblast specific factor 0.0240269
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0236614
MCL1 myeloid cell leukemia 1 0.0235909
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0235784
CLIC4 chloride intracellular channel 4 0.0234675
CTSB cathepsin B 0.0229838
FNDC3B fibronectin type III domain containing 3B 0.0229102
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0228929
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0227769
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0226317
TNS1 tensin 1 0.0224193
MTSS1 metastasis suppressor 1 0.0223491
ELOVL5 ELOVL fatty acid elongase 5 0.0223426
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0219661
APLP2 amyloid beta (A4) precursor-like protein 2 0.0218205
SFPQ splicing factor proline/glutamine-rich 0.0216364
DSPP dentin sialophosphoprotein 0.0210136
FAT1 FAT atypical cadherin 1 0.0209597
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0202149
FAM107B family with sequence similarity 107, member B 0.0199791
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0197865
BRD2 bromodomain containing 2 0.0196942
P4HB prolyl 4-hydroxylase, beta polypeptide 0.019636
CSF1 colony stimulating factor 1 (macrophage) 0.0194348
DDIT4 DNA-damage-inducible transcript 4 0.0193969
RPL3 ribosomal protein L3 0.0191537
RSRP1 arginine/serine-rich protein 1 0.0190546
LRRC59 leucine rich repeat containing 59 0.0187745
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0182755
SEPTIN9 septin 9 0.0182053
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0180383
GYS1 glycogen synthase 1 (muscle) 0.0175653
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0172856
SQSTM1 sequestosome 1 0.0171517
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.017063
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0168626
PTMA prothymosin, alpha 0.0166563
PDIA4 protein disulfide isomerase family A, member 4 0.0166118
ZSWIM6 zinc finger, SWIM-type containing 6 0.0165747
HLA-E major histocompatibility complex, class I, E 0.0164107
MYO10 myosin X 0.0163082
ANXA5 annexin A5 0.0162997
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme 0.0162906
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0157839
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0153806
NUCB1 nucleobindin 1 0.015322
DPYSL3 dihydropyrimidinase-like 3 0.0153197
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0152511
CCDC9 coiled-coil domain containing 9 0.0152293

decreased expression

Symbol Name Standardized Value
COL1A1 collagen, type I, alpha 1 -0.200752
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.13009
TIMP3 TIMP metallopeptidase inhibitor 3 -0.121312
COL1A2 collagen, type I, alpha 2 -0.110826
LOX lysyl oxidase -0.0841409
NDRG1 N-myc downstream regulated 1 -0.0826871
DPYD dihydropyrimidine dehydrogenase -0.0754499
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0685588
ZBTB20 zinc finger and BTB domain containing 20 -0.0650422
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0538208
FBN1 fibrillin 1 -0.0531162
GLIS3 GLIS family zinc finger 3 -0.0515453
MAP1B microtubule-associated protein 1B -0.0513671
TRPS1 trichorhinophalangeal syndrome I -0.0496745
CDH13 cadherin 13 -0.0491836
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0449244
HMGA2 high mobility group AT-hook 2 -0.0448375
PDE10A phosphodiesterase 10A -0.0430516
RPS6 ribosomal protein S6 -0.0430114
TMSB10 thymosin beta 10 -0.0382194
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0371234
PSD3 pleckstrin and Sec7 domain containing 3 -0.0364638
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0357146
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0347424
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0341133
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0335736
GARS1 glycyl-tRNA synthetase 1 -0.0334491
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0331201
ACTG1 actin gamma 1 -0.0326697
NALF1 NALCN channel auxiliary factor 1 -0.0320993
PRR16 proline rich 16 -0.0311965
CALD1 caldesmon 1 -0.0304592
SMYD3 SET and MYND domain containing 3 -0.0301025
GOLGA4 golgin A4 -0.0294886
TRAM1 translocation associated membrane protein 1 -0.0294578
MRPS6 mitochondrial ribosomal protein S6 -0.0290067
TGFBI transforming growth factor, beta-induced, 68kDa -0.0280242
OSMR oncostatin M receptor -0.0279019
GNAS GNAS complex locus -0.0275002
HMCN1 hemicentin 1 -0.0271888
MAP4 microtubule-associated protein 4 -0.0269299
ASPH aspartate beta-hydroxylase -0.0266096
AHNAK AHNAK nucleoprotein -0.026602
NRP1 neuropilin 1 -0.0261261
LMAN1 lectin, mannose-binding, 1 -0.0257888
WSB1 WD repeat and SOCS box containing 1 -0.0256973
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0255985
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0251584
ABI3BP ABI family, member 3 (NESH) binding protein -0.0251127
DLG1 discs, large homolog 1 (Drosophila) -0.0249186
VEGFC vascular endothelial growth factor C -0.0246609
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0245724
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0244853
PTK2 protein tyrosine kinase 2 -0.0244717
ZFPM2 zinc finger protein, FOG family member 2 -0.0242699
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0240537
CLMP CXADR-like membrane protein -0.0238017
CYB5R3 cytochrome b5 reductase 3 -0.0237584
SRPK2 SRSF protein kinase 2 -0.0234014
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0230319
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0228336
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0227616
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0227244
EHD2 EH-domain containing 2 -0.0225991
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.022233
DPYSL2 dihydropyrimidinase-like 2 -0.02199
BBX bobby sox homolog (Drosophila) -0.0215862
NF1 neurofibromin 1 -0.0214562
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0213486
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0211288
RASAL2 RAS protein activator like 2 -0.021066
ANKRD28 ankyrin repeat domain 28 -0.0209378
KPNB1 karyopherin (importin) beta 1 -0.0208136
RTN4 reticulon 4 -0.0207444
ZMYND8 zinc finger, MYND-type containing 8 -0.0207088
ATM ATM serine/threonine kinase -0.0206762
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.020457
TENT5A terminal nucleotidyltransferase 5A -0.0201328
MAML2 mastermind-like 2 (Drosophila) -0.020054
WASF2 WAS protein family, member 2 -0.0199521
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0199231
COG5 component of oligomeric golgi complex 5 -0.0196965
CNTN5 contactin 5 -0.0193349
NPEPPS aminopeptidase puromycin sensitive -0.0192514
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0190701
BRWD1 bromodomain and WD repeat domain containing 1 -0.0189329
SLC38A2 solute carrier family 38, member 2 -0.0189155
KCTD9 potassium channel tetramerization domain containing 9 -0.0188535
MYADM myeloid-associated differentiation marker -0.0187642
LPP LIM domain containing preferred translocation partner in lipoma -0.0186701
NREP neuronal regeneration related protein -0.0186234
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0182539
HP1BP3 heterochromatin protein 1, binding protein 3 -0.018238
OXR1 oxidation resistance 1 -0.0179746
SBF2 SET binding factor 2 -0.0179667
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0179077
SMC4 structural maintenance of chromosomes 4 -0.0179021
ITCH itchy E3 ubiquitin protein ligase -0.0178944
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.017844
PFN1 profilin 1 -0.017633