Carbamazepine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbamazepine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbamazepine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.278535
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0535784
LOXL2 lysyl oxidase-like 2 0.0514433
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0425815
EEF2 eukaryotic translation elongation factor 2 0.0375007
TMSB4X thymosin beta 4, X-linked 0.0368286
SLC38A2 solute carrier family 38, member 2 0.0366422
AHNAK2 AHNAK nucleoprotein 2 0.0354788
MYH9 myosin, heavy chain 9, non-muscle 0.0340775
PYGL phosphorylase, glycogen, liver 0.0303357
MACF1 microtubule-actin crosslinking factor 1 0.0283936
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0282821
PLIN2 perilipin 2 0.0276176
LDHA lactate dehydrogenase A 0.0272791
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0269756
DOCK11 dedicator of cytokinesis 11 0.0265086
MBNL2 muscleblind-like splicing regulator 2 0.0262089
EPHA4 EPH receptor A4 0.0261155
CALR calreticulin 0.0251477
HDAC9 histone deacetylase 9 0.0235157
KRT18 keratin 18, type I 0.0233211
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.023282
ITGB4 integrin, beta 4 0.0232553
MYOF myoferlin 0.0232435
DLG1 discs, large homolog 1 (Drosophila) 0.0225407
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0223772
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0222271
PLEC plectin 0.0219679
PLK2 polo-like kinase 2 0.0219008
RNF213 ring finger protein 213 0.0214462
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0213284
PTPRF protein tyrosine phosphatase, receptor type, F 0.0212364
EEF1G eukaryotic translation elongation factor 1 gamma 0.0209536
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 0.0208368
LASP1 LIM and SH3 protein 1 0.020298
CANX calnexin 0.0201535
FLNA filamin A, alpha 0.0200264
RGS4 regulator of G-protein signaling 4 0.0195204
EFNA5 ephrin-A5 0.0182698
EGFR epidermal growth factor receptor 0.0180935
APP amyloid beta (A4) precursor protein 0.0179242
HDLBP high density lipoprotein binding protein 0.0178313
FLNB filamin B, beta 0.0176504
SOX9 SRY (sex determining region Y)-box 9 0.0175659
APLP2 amyloid beta (A4) precursor-like protein 2 0.01726
FNBP4 formin binding protein 4 0.0167875
ANXA2 annexin A2 0.0164831
JUN jun proto-oncogene 0.0161276
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0157109
RAP2B RAP2B, member of RAS oncogene family 0.0156522
CEP250 centrosomal protein 250kDa 0.015652
CD109 CD109 molecule 0.01563
MCL1 myeloid cell leukemia 1 0.0154595
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0153631
OGA O-GlcNAcase 0.0152381
DDIT4 DNA-damage-inducible transcript 4 0.014865
VCL vinculin 0.0148581
KLF6 Kruppel-like factor 6 0.0146948
PODXL podocalyxin-like 0.0145507
ACTN4 actinin, alpha 4 0.0145369
SMAD3 SMAD family member 3 0.0143204
GYS1 glycogen synthase 1 (muscle) 0.0139642
AEBP2 AE binding protein 2 0.0136767
SOD2 superoxide dismutase 2, mitochondrial 0.013364
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0132726
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0131225
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0130789
NDRG1 N-myc downstream regulated 1 0.0128088
STK17A serine/threonine kinase 17a 0.0127044
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0124819
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.0123292
MYO18A myosin XVIIIA 0.0123142
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0123054
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0122882
IGF1R insulin-like growth factor 1 receptor 0.0122782
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like 0.0120761
ZMIZ1 zinc finger, MIZ-type containing 1 0.0120278
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0120152
ENO2 enolase 2 (gamma, neuronal) 0.0114945
UBE2E3 ubiquitin-conjugating enzyme E2E 3 0.0114456
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.011401
BEGAIN brain-enriched guanylate kinase-associated 0.0113854
TBC1D9B TBC1 domain family, member 9B (with GRAM domain) 0.0113093
TRERF1 transcriptional regulating factor 1 0.0112977
LPP LIM domain containing preferred translocation partner in lipoma 0.0112388
CSMD3 CUB and Sushi multiple domains 3 0.0111225
INF2 inverted formin, FH2 and WH2 domain containing 0.0111081
MTCL1 microtubule crosslinking factor 1 0.0108849
EPHA2 EPH receptor A2 0.010711
DCTN1 dynactin 1 0.0105938
INTS6 integrator complex subunit 6 0.0105604
ABR active BCR-related 0.0103395
MAPT microtubule-associated protein tau 0.010226
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0101908
TSC22D1 TSC22 domain family, member 1 0.0101625
GANAB glucosidase, alpha; neutral AB 0.0101353
CLIP2 CAP-GLY domain containing linker protein 2 0.0100948
KDM4B lysine (K)-specific demethylase 4B 0.00988056
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 0.00985427
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.00983704

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.29637
MT2A metallothionein 2A -0.179559
RPS6 ribosomal protein S6 -0.102866
TP63 tumor protein p63 -0.100354
POTEF POTE ankyrin domain family, member F -0.0956536
TM4SF1 transmembrane 4 L six family member 1 -0.076407
KMT2E lysine (K)-specific methyltransferase 2E -0.0758966
TXNRD1 thioredoxin reductase 1 -0.0754784
RPS19 ribosomal protein S19 -0.0724659
HLA-B major histocompatibility complex, class I, B -0.0680278
RPS8 ribosomal protein S8 -0.067909
RPL35A ribosomal protein L35a -0.0655256
TPT1 tumor protein, translationally-controlled 1 -0.0579072
TMSB10 thymosin beta 10 -0.0568872
RPL36 ribosomal protein L36 -0.0556712
RPLP2 ribosomal protein, large, P2 -0.0556357
PTMA prothymosin, alpha -0.0531324
KTN1 kinectin 1 (kinesin receptor) -0.0528962
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0511059
MT1E metallothionein 1E -0.0510946
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0497793
USP34 ubiquitin specific peptidase 34 -0.0490457
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0489897
RPL38 ribosomal protein L38 -0.0481959
RPL37A ribosomal protein L37a -0.0476292
WSB1 WD repeat and SOCS box containing 1 -0.0471095
RPL26 ribosomal protein L26 -0.0465367
RPS23 ribosomal protein S23 -0.0463647
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0462741
RPL28 ribosomal protein L28 -0.0459369
FTL ferritin, light polypeptide -0.045243
RPS2 ribosomal protein S2 -0.0445155
RPL31 ribosomal protein L31 -0.0441146
RPL23 ribosomal protein L23 -0.0435591
MT1X metallothionein 1X -0.0429579
SRGN serglycin -0.0415432
ZFAND3 zinc finger, AN1-type domain 3 -0.0410741
RPS29 ribosomal protein S29 -0.0389764
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.038581
FAF1 Fas (TNFRSF6) associated factor 1 -0.038546
RPS13 ribosomal protein S13 -0.0384979
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.038191
S100A9 S100 calcium binding protein A9 -0.0371879
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0371824
NAMPT nicotinamide phosphoribosyltransferase -0.0356898
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0355302
RPL12 ribosomal protein L12 -0.035406
SRPK2 SRSF protein kinase 2 -0.0346739
RPLP1 ribosomal protein, large, P1 -0.0343139
RPL34 ribosomal protein L34 -0.0338244
RPS21 ribosomal protein S21 -0.0337403
ZMYND8 zinc finger, MYND-type containing 8 -0.0337057
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0334003
RPS15 ribosomal protein S15 -0.0333532
RPL36A ribosomal protein L36a -0.0332202
JMJD1C jumonji domain containing 1C -0.0331261
WARS1 tryptophanyl-tRNA synthetase 1 -0.0331114
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0329574
RPS10 ribosomal protein S10 -0.0329557
RPS12 ribosomal protein S12 -0.0328347
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0325122
RTN4 reticulon 4 -0.0319786
ACTG1 actin gamma 1 -0.0319266
GCLM glutamate-cysteine ligase, modifier subunit -0.031875
RPL37 ribosomal protein L37 -0.0316602
YBX3 Y box binding protein 3 -0.0315611
MATR3 matrin 3 -0.0315503
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0315201
TMEM41B transmembrane protein 41B -0.0314323
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0306004
DPYD dihydropyrimidine dehydrogenase -0.0304393
PRRC2C proline-rich coiled-coil 2C -0.0297772
PNISR PNN-interacting serine/arginine-rich protein -0.0297604
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0287584
RPL8 ribosomal protein L8 -0.0286332
B2M beta-2-microglobulin -0.0283021
RPL32 ribosomal protein L32 -0.0282848
RPL35 ribosomal protein L35 -0.0282159
PSD3 pleckstrin and Sec7 domain containing 3 -0.0279723
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0274514
VMP1 vacuole membrane protein 1 -0.0273263
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0270818
ZEB1 zinc finger E-box binding homeobox 1 -0.026924
KPNB1 karyopherin (importin) beta 1 -0.0268634
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0265917
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0265435
SPAG9 sperm associated antigen 9 -0.0263762
RPS27 ribosomal protein S27 -0.0262466
CLTC clathrin, heavy chain (Hc) -0.0259191
RPL7A ribosomal protein L7a -0.0257996
SMC4 structural maintenance of chromosomes 4 -0.0257992
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0255045
FBXO11 F-box protein 11 -0.0254452
FUS FUS RNA binding protein -0.0251986
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0249531
PFN1 profilin 1 -0.0249382
GARS1 glycyl-tRNA synthetase 1 -0.0248689
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0247985
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0245792
EIF5B eukaryotic translation initiation factor 5B -0.0241474