Carbamazepine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbamazepine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbamazepine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0865173
TXNRD1 thioredoxin reductase 1 0.0696594
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0666493
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0619968
HSPA8 heat shock 70kDa protein 8 0.0603101
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0601927
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0549894
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0479758
WDR43 WD repeat domain 43 0.0455069
MYH9 myosin, heavy chain 9, non-muscle 0.0447619
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0442577
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0439449
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0428461
TFPI2 tissue factor pathway inhibitor 2 0.0428313
PM20D1 peptidase M20 domain containing 1 0.042797
ERRFI1 ERBB receptor feedback inhibitor 1 0.0389843
TPM3 tropomyosin 3 0.0382733
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0370244
EEF2 eukaryotic translation elongation factor 2 0.0369015
RTN4 reticulon 4 0.0367845
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0366981
RAD21 RAD21 homolog (S. pombe) 0.0366458
RPL7 ribosomal protein L7 0.0344942
GRAMD1B GRAM domain containing 1B 0.0343994
FGB fibrinogen beta chain 0.0307179
CANX calnexin 0.0300003
CALR calreticulin 0.0298533
NAMPT nicotinamide phosphoribosyltransferase 0.0285684
RPL19 ribosomal protein L19 0.0280435
RPL4 ribosomal protein L4 0.0280322
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0278266
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0268676
TM4SF1 transmembrane 4 L six family member 1 0.0267941
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0266092
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0263777
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0263117
APP amyloid beta (A4) precursor protein 0.0259237
KLF6 Kruppel-like factor 6 0.0253162
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0253086
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0252262
CYRIB CYFIP related Rac1 interactor B 0.0242781
ILF2 interleukin enhancer binding factor 2 0.023956
EEF1G eukaryotic translation elongation factor 1 gamma 0.0238066
ANLN anillin, actin binding protein 0.0236549
TPX2 TPX2, microtubule-associated 0.0233528
ECT2 epithelial cell transforming 2 0.0232564
DENND4A DENN/MADD domain containing 4A 0.0232105
HYOU1 hypoxia up-regulated 1 0.0231176
ARL5B ADP-ribosylation factor-like 5B 0.0230144
FAM168A family with sequence similarity 168, member A 0.0228296
DSCAM Down syndrome cell adhesion molecule 0.0226369
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0224419
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0221896
WBP11 WW domain binding protein 11 0.021926
RHEB Ras homolog enriched in brain 0.0218474
YBX3 Y box binding protein 3 0.0215869
LAPTM4A lysosomal protein transmembrane 4 alpha 0.0213698
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0212378
OSBPL9 oxysterol binding protein-like 9 0.0210094
YME1L1 YME1-like 1 ATPase 0.020712
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0204282
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0200677
NOL10 nucleolar protein 10 0.0199372
KDM3A lysine (K)-specific demethylase 3A 0.0196271
ACIN1 apoptotic chromatin condensation inducer 1 0.0195505
EIF4A1 eukaryotic translation initiation factor 4A1 0.0195193
PFDN2 prefoldin subunit 2 0.0194979
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.019492
RRM2 ribonucleotide reductase M2 0.0192308
XPO1 exportin 1 0.0190372
ATP5F1B ATP synthase F1 subunit beta 0.0189275
ACACA acetyl-CoA carboxylase alpha 0.0185112
SPAG5 sperm associated antigen 5 0.0184297
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0181666
CTNNBL1 catenin, beta like 1 0.0181062
RBM8A RNA binding motif protein 8A 0.0180964
NUP58 nucleoporin 58 0.0180887
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0179491
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0178578
JAK1 Janus kinase 1 0.0178164
FXR1 fragile X mental retardation, autosomal homolog 1 0.0178005
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0177288
USP3 ubiquitin specific peptidase 3 0.0176599
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0176106
ACLY ATP citrate lyase 0.0175543
AKAP12 A kinase (PRKA) anchor protein 12 0.017543
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0172712
CASC3 cancer susceptibility candidate 3 0.0172202
SPAG9 sperm associated antigen 9 0.0169563
FLNA filamin A, alpha 0.0169186
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0168072
IST1 increased sodium tolerance 1 homolog (yeast) 0.0167005
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0166757
FBL fibrillarin 0.0165985
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0165742
RPS7 ribosomal protein S7 0.0165345
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0164888
RPL3 ribosomal protein L3 0.0164668
TRA2B transformer 2 beta homolog (Drosophila) 0.0163817
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0162589

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.330589
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.209182
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.149985
PDE4D phosphodiesterase 4D, cAMP-specific -0.0904032
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0891972
FTH1 ferritin, heavy polypeptide 1 -0.0848511
THSD4 thrombospondin, type I, domain containing 4 -0.0839948
TMSB10 thymosin beta 10 -0.0830841
DOCK4 dedicator of cytokinesis 4 -0.0749021
IGFBP3 insulin-like growth factor binding protein 3 -0.0732385
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0660277
FTL ferritin, light polypeptide -0.0646153
ACTG1 actin gamma 1 -0.063333
FMNL2 formin-like 2 -0.0572451
FNDC3B fibronectin type III domain containing 3B -0.0517326
BASP1 brain abundant, membrane attached signal protein 1 -0.051586
PARD3 par-3 family cell polarity regulator -0.0502696
RPS6 ribosomal protein S6 -0.0465815
HLA-B major histocompatibility complex, class I, B -0.0462452
RPL23 ribosomal protein L23 -0.043663
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0429649
S100A6 S100 calcium binding protein A6 -0.0404164
EGFR epidermal growth factor receptor -0.0402742
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.039918
RBM25 RNA binding motif protein 25 -0.0397671
RPLP1 ribosomal protein, large, P1 -0.0394171
IGF2 insulin-like growth factor 2 -0.0393054
NDRG1 N-myc downstream regulated 1 -0.0391862
RPS8 ribosomal protein S8 -0.0384978
KTN1 kinectin 1 (kinesin receptor) -0.0384594
ARHGAP26 Rho GTPase activating protein 26 -0.038366
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0360295
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0359288
FLNB filamin B, beta -0.0356891
RPL35A ribosomal protein L35a -0.0356545
IER3 immediate early response 3 -0.034499
LOC102724023 ES1 protein homolog, mitochondrial -0.0343538
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0330285
PYGL phosphorylase, glycogen, liver -0.032793
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0324167
SAMD4A sterile alpha motif domain containing 4A -0.0319594
LDHA lactate dehydrogenase A -0.0312618
RAB7A RAB7A, member RAS oncogene family -0.0310659
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0305288
EIF1 eukaryotic translation initiation factor 1 -0.0303207
MAML3 mastermind-like 3 (Drosophila) -0.0298391
NEBL nebulette -0.0296222
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0291342
PFN1 profilin 1 -0.0288004
PTPRM protein tyrosine phosphatase, receptor type, M -0.0286422
POTEF POTE ankyrin domain family, member F -0.0284235
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.028175
ITCH itchy E3 ubiquitin protein ligase -0.0277379
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0274959
S100A10 S100 calcium binding protein A10 -0.0274065
TPT1 tumor protein, translationally-controlled 1 -0.0273861
TRIO trio Rho guanine nucleotide exchange factor -0.0267866
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.026606
IL6 interleukin 6 -0.0262861
HLA-A major histocompatibility complex, class I, A -0.0258444
RPS19 ribosomal protein S19 -0.0256151
RPL31 ribosomal protein L31 -0.0255471
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0253795
DOCK5 dedicator of cytokinesis 5 -0.0253569
GOLGA4 golgin A4 -0.025063
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0248677
RPL37A ribosomal protein L37a -0.024825
UBASH3B ubiquitin associated and SH3 domain containing B -0.0242245
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0241302
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0237583
SNX14 sorting nexin 14 -0.0229514
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0229432
EXT1 exostosin glycosyltransferase 1 -0.02292
C15ORF48 chromosome 15 open reading frame 48 -0.0227468
EGR1 early growth response 1 -0.0223407
ZBTB20 zinc finger and BTB domain containing 20 -0.022032
NF1 neurofibromin 1 -0.0217246
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.021691
MAP1B microtubule-associated protein 1B -0.0215067
CMIP c-Maf inducing protein -0.0215058
ZMYND8 zinc finger, MYND-type containing 8 -0.0214566
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0213181
COPA coatomer protein complex, subunit alpha -0.0211853
CD44 CD44 molecule (Indian blood group) -0.0210974
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0208257
MT1X metallothionein 1X -0.0208181
NRG1 neuregulin 1 -0.0207528
RAB2A RAB2A, member RAS oncogene family -0.020673
NBEAL1 neurobeachin-like 1 -0.020504
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0204609
RPS21 ribosomal protein S21 -0.0203666
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0202923
MORF4L2 mortality factor 4 like 2 -0.0201183
NUMB numb homolog (Drosophila) -0.0199127
NT5C2 5'-nucleotidase, cytosolic II -0.0197079
MYO1E myosin IE -0.0196677
IGFBP4 insulin-like growth factor binding protein 4 -0.0196369
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.019558
FBXL2 F-box and leucine-rich repeat protein 2 -0.0195291
DENND5B DENN/MADD domain containing 5B -0.0194555